RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 CENPJQ9HC77 1338 aaPredicted RBP14.83□□□□□ -0.04
NOTCH3-203ENST00000595514 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
NOTCH3-203ENST00000595514 NFAT5O94916 1531 aa14.82□□□□□ -0.04
NOTCH3-203ENST00000595514 C16orf71Q8IYS4 520 aaPredicted RBP14.81□□□□□ -0.04
NOTCH3-203ENST00000595514 FLAD1Q8NFF5 587 aa14.81□□□□□ -0.04
NOTCH3-203ENST00000595514 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
NOTCH3-203ENST00000595514 TTC21AQ8NDW8 1320 aa14.81□□□□□ -0.04
NOTCH3-203ENST00000595514 ANKRD36BQ8N2N9 1353 aa14.81□□□□□ -0.04
NOTCH3-203ENST00000595514 QRICH2Q9H0J4 1663 aa14.81□□□□□ -0.04
NOTCH3-203ENST00000595514 WDR90Q96KV7 1748 aa14.8□□□□□ -0.04
NOTCH3-203ENST00000595514 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
NOTCH3-203ENST00000595514 NMRK2Q9NPI5 230 aa14.8□□□□□ -0.04
NOTCH3-203ENST00000595514 USP47Q96K76 1375 aa14.78□□□□□ -0.04
NOTCH3-203ENST00000595514 HMGB2P26583 209 aaKnown RBP14.78□□□□□ -0.04
NOTCH3-203ENST00000595514 FSTL1Q12841 308 aa14.78□□□□□ -0.04
NOTCH3-203ENST00000595514 NSD2O96028 1365 aa14.77□□□□□ -0.04
NOTCH3-203ENST00000595514 LY75O60449 1722 aa14.76□□□□□ -0.05
NOTCH3-203ENST00000595514 NBPF1Q3BBV0 1214 aa14.76□□□□□ -0.05
NOTCH3-203ENST00000595514 CICQ96RK0 1608 aaPredicted RBP14.74□□□□□ -0.05
NOTCH3-203ENST00000595514 EVC2Q86UK5 1308 aa14.74□□□□□ -0.05
NOTCH3-203ENST00000595514 HSPA1AP0DMV8 641 aaKnown RBP14.74□□□□□ -0.05
NOTCH3-203ENST00000595514 HSPA1BP0DMV9 641 aaKnown RBP14.74□□□□□ -0.05
NOTCH3-203ENST00000595514 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
NOTCH3-203ENST00000595514 ARHGAP27Q6ZUM4 889 aa14.72□□□□□ -0.05
NOTCH3-203ENST00000595514 AK7Q96M32 723 aa14.72□□□□□ -0.05
NOTCH3-203ENST00000595514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.05
NOTCH3-203ENST00000595514 ZCRB1Q8TBF4 217 aaKnown RBP14.71□□□□□ -0.05
NOTCH3-203ENST00000595514 BCS1LQ9Y276 419 aa14.71□□□□□ -0.05
NOTCH3-203ENST00000595514 DOT1LQ8TEK3 1739 aa14.71□□□□□ -0.05
NOTCH3-203ENST00000595514 KIAA1210Q9ULL0 1709 aa14.7□□□□□ -0.06
NOTCH3-203ENST00000595514 PHF14O94880 888 aa14.7□□□□□ -0.06
NOTCH3-203ENST00000595514 LTV1Q96GA3 475 aaPredicted RBP14.7□□□□□ -0.06
NOTCH3-203ENST00000595514 USP31Q70CQ4 1352 aa14.7□□□□□ -0.06
NOTCH3-203ENST00000595514 KDM2BQ8NHM5 1336 aa14.69□□□□□ -0.06
NOTCH3-203ENST00000595514 PCDH10Q9P2E7 1040 aa14.69□□□□□ -0.06
NOTCH3-203ENST00000595514 PLEKHG2Q9H7P9 1386 aa14.69□□□□□ -0.06
NOTCH3-203ENST00000595514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.68□□□□□ -0.06
NOTCH3-203ENST00000595514 SMC1BQ8NDV3 1235 aa14.68□□□□□ -0.06
NOTCH3-203ENST00000595514 NSD3Q9BZ95 1437 aa14.67□□□□□ -0.06
NOTCH3-203ENST00000595514 C9orf131Q5VYM1 1079 aa14.67□□□□□ -0.06
NOTCH3-203ENST00000595514 AMIGO3Q86WK7 504 aa14.67□□□□□ -0.06
NOTCH3-203ENST00000595514 NME9Q86XW9 330 aa14.67□□□□□ -0.06
NOTCH3-203ENST00000595514 PALLDQ8WX93 1383 aa14.67□□□□□ -0.06
NOTCH3-203ENST00000595514 PXDNLA1KZ92 1463 aa14.67□□□□□ -0.06
NOTCH3-203ENST00000595514 C5P01031 1676 aa14.67□□□□□ -0.06
NOTCH3-203ENST00000595514 TGFB2P61812 414 aa14.66□□□□□ -0.06
NOTCH3-203ENST00000595514 IP6K1Q92551 441 aa14.66□□□□□ -0.06
NOTCH3-203ENST00000595514 FCHSD2O94868 740 aa14.65□□□□□ -0.06
NOTCH3-203ENST00000595514 SSFA2P28290 1259 aa14.65□□□□□ -0.06
NOTCH3-203ENST00000595514 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
NOTCH3-203ENST00000595514 A0A0G2JLW4 131 aa14.64□□□□□ -0.07
NOTCH3-203ENST00000595514 MMP10P09238 476 aa14.64□□□□□ -0.07
NOTCH3-203ENST00000595514 SMIM5Q71RC9 77 aa14.64□□□□□ -0.07
NOTCH3-203ENST00000595514 KCPQ6ZWJ8 1503 aa14.64□□□□□ -0.07
NOTCH3-203ENST00000595514 LTN1O94822 1766 aa14.64□□□□□ -0.07
NOTCH3-203ENST00000595514 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
NOTCH3-203ENST00000595514 USP54Q70EL1 1684 aa14.64□□□□□ -0.07
NOTCH3-203ENST00000595514 MEGF6O75095 1541 aa14.62□□□□□ -0.07
NOTCH3-203ENST00000595514 C4BP0C0L5 1744 aa14.62□□□□□ -0.07
NOTCH3-203ENST00000595514 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
NOTCH3-203ENST00000595514 SMARCC1Q92922 1105 aaPredicted RBP14.62□□□□□ -0.07
NOTCH3-203ENST00000595514 PCGF6Q9BYE7 350 aa14.62□□□□□ -0.07
NOTCH3-203ENST00000595514 RNF181Q9P0P0 153 aa14.61□□□□□ -0.07
NOTCH3-203ENST00000595514 FAM208AQ9UK61 1670 aaKnown RBP14.61□□□□□ -0.07
NOTCH3-203ENST00000595514 SBNO2Q9Y2G9 1366 aa14.6□□□□□ -0.07
NOTCH3-203ENST00000595514 DPEP1P16444 411 aa14.6□□□□□ -0.07
NOTCH3-203ENST00000595514 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
NOTCH3-203ENST00000595514 RAPGEF4Q8WZA2 1011 aa14.59□□□□□ -0.07
NOTCH3-203ENST00000595514 MON2Q7Z3U7 1717 aa14.58□□□□□ -0.07
NOTCH3-203ENST00000595514 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.07
NOTCH3-203ENST00000595514 TAF1LQ8IZX4 1826 aa14.58□□□□□ -0.08
NOTCH3-203ENST00000595514 GNPATO15228 680 aa14.58□□□□□ -0.08
NOTCH3-203ENST00000595514 AMPHP49418 695 aa14.58□□□□□ -0.08
NOTCH3-203ENST00000595514 HDGFL2Q7Z4V5 671 aaPredicted RBP14.58□□□□□ -0.08
NOTCH3-203ENST00000595514 CCDC87Q9NVE4 849 aa14.58□□□□□ -0.08
NOTCH3-203ENST00000595514 HOXC9P31274 260 aa14.57□□□□□ -0.08
NOTCH3-203ENST00000595514 PCDH11XQ9BZA7 1347 aa14.57□□□□□ -0.08
NOTCH3-203ENST00000595514 PCDH11YQ9BZA8 1340 aa14.57□□□□□ -0.08
NOTCH3-203ENST00000595514 TATP17735 454 aaPredicted RBP14.56□□□□□ -0.08
NOTCH3-203ENST00000595514 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
NOTCH3-203ENST00000595514 LINC00116Q8NCU8 138 aa14.56□□□□□ -0.08
NOTCH3-203ENST00000595514 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
NOTCH3-203ENST00000595514 UBR3Q6ZT12 1888 aa14.56□□□□□ -0.08
NOTCH3-203ENST00000595514 N4BP2Q86UW6 1770 aaPredicted RBP14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 LOC102724428A0A0B4J2F2 783 aa14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 SIK1P57059 783 aa14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 NLGN1Q8N2Q7 840 aa14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 DCAF5Q96JK2 942 aa14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 PIM2Q9P1W9 311 aa14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 MAP3K19Q56UN5 1328 aa14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 EDC4Q6P2E9 1401 aaKnown RBP14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 TNRC6CQ9HCJ0 1690 aaKnown RBP14.55□□□□□ -0.08
NOTCH3-203ENST00000595514 VEGFAP15692 232 aaPredicted RBP14.54□□□□□ -0.08
NOTCH3-203ENST00000595514 TMF1P82094 1093 aa14.54□□□□□ -0.08
NOTCH3-203ENST00000595514 DALRD3Q5D0E6 543 aaKnown RBP14.54□□□□□ -0.08
NOTCH3-203ENST00000595514 USHBP1Q8N6Y0 703 aa14.54□□□□□ -0.08
NOTCH3-203ENST00000595514 KIAA1551Q9HCM1 1747 aa14.54□□□□□ -0.08
NOTCH3-203ENST00000595514 KIF13BQ9NQT8 1826 aa14.53□□□□□ -0.08
NOTCH3-203ENST00000595514 PKD1L3Q7Z443 1732 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms