RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SLC16A10Q8TF71 515 aa18.52■□□□□ 0.56
H3F3B-213ENST00000593254 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
H3F3B-213ENST00000593254 IL2RBP14784 551 aa18.51■□□□□ 0.55
H3F3B-213ENST00000593254 TMF1P82094 1093 aa18.5■□□□□ 0.55
H3F3B-213ENST00000593254 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
H3F3B-213ENST00000593254 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
H3F3B-213ENST00000593254 NLRP2Q9NX02 1062 aa18.49■□□□□ 0.55
H3F3B-213ENST00000593254 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
H3F3B-213ENST00000593254 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
H3F3B-213ENST00000593254 POLD1P28340 1107 aa18.47■□□□□ 0.55
H3F3B-213ENST00000593254 NLGN2Q8NFZ4 835 aa18.46■□□□□ 0.55
H3F3B-213ENST00000593254 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
H3F3B-213ENST00000593254 LY75O60449 1722 aa18.45■□□□□ 0.54
H3F3B-213ENST00000593254 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
H3F3B-213ENST00000593254 ANKRD24Q8TF21 1146 aa18.44■□□□□ 0.54
H3F3B-213ENST00000593254 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
H3F3B-213ENST00000593254 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
H3F3B-213ENST00000593254 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
H3F3B-213ENST00000593254 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.545e-17■□□□□ 8.2
H3F3B-213ENST00000593254 COG3Q96JB2 828 aa18.42■□□□□ 0.54
H3F3B-213ENST00000593254 TFCP2L1Q9NZI6 479 aa18.42■□□□□ 0.54
H3F3B-213ENST00000593254 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
H3F3B-213ENST00000593254 GRIN3BO60391 1043 aa18.4■□□□□ 0.54
H3F3B-213ENST00000593254 IP6K1Q92551 441 aa18.4■□□□□ 0.54
H3F3B-213ENST00000593254 NSD2O96028 1365 aa18.4■□□□□ 0.54
H3F3B-213ENST00000593254 FYB1O15117 783 aa18.39■□□□□ 0.53
H3F3B-213ENST00000593254 KCNQ4P56696 695 aa18.39■□□□□ 0.53
H3F3B-213ENST00000593254 DOT1LQ8TEK3 1739 aa18.39■□□□□ 0.53
H3F3B-213ENST00000593254 DDX54Q8TDD1 881 aaKnown RBP18.38■□□□□ 0.53
H3F3B-213ENST00000593254 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
H3F3B-213ENST00000593254 RGPD2P0DJD1 1756 aa18.36■□□□□ 0.53
H3F3B-213ENST00000593254 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
H3F3B-213ENST00000593254 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
H3F3B-213ENST00000593254 ATP10DQ9P241 1426 aa18.36■□□□□ 0.53
H3F3B-213ENST00000593254 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
H3F3B-213ENST00000593254 FBLN1P23142 703 aa18.35■□□□□ 0.53
H3F3B-213ENST00000593254 HOXC9P31274 260 aa18.35■□□□□ 0.53
H3F3B-213ENST00000593254 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
H3F3B-213ENST00000593254 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
H3F3B-213ENST00000593254 NSD3Q9BZ95 1437 aa18.33■□□□□ 0.53
H3F3B-213ENST00000593254 ADCY9O60503 1353 aa18.33■□□□□ 0.53
H3F3B-213ENST00000593254 AMPHP49418 695 aa18.33■□□□□ 0.52
H3F3B-213ENST00000593254 COL23A1Q86Y22 540 aaPredicted RBP18.33■□□□□ 0.52
H3F3B-213ENST00000593254 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
H3F3B-213ENST00000593254 EIF4G2P78344 907 aaKnown RBP eCLIP18.32■□□□□ 0.52
H3F3B-213ENST00000593254 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
H3F3B-213ENST00000593254 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
H3F3B-213ENST00000593254 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
H3F3B-213ENST00000593254 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
H3F3B-213ENST00000593254 C5P01031 1676 aa18.3■□□□□ 0.52
H3F3B-213ENST00000593254 MEGF6O75095 1541 aa18.29■□□□□ 0.52
H3F3B-213ENST00000593254 TAF1LQ8IZX4 1826 aa18.29■□□□□ 0.52
H3F3B-213ENST00000593254 HSPA6P17066 643 aa18.29■□□□□ 0.52
H3F3B-213ENST00000593254 ZCRB1Q8TBF4 217 aaKnown RBP18.29■□□□□ 0.52
H3F3B-213ENST00000593254 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-213ENST00000593254 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
H3F3B-213ENST00000593254 KIF24Q5T7B8 1368 aa18.29■□□□□ 0.52
H3F3B-213ENST00000593254 MSL1Q68DK7 614 aa18.28■□□□□ 0.52
H3F3B-213ENST00000593254 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
H3F3B-213ENST00000593254 MAP2P11137 1827 aaKnown RBP18.27■□□□□ 0.52
H3F3B-213ENST00000593254 FLT4P35916 1363 aa18.27■□□□□ 0.51
H3F3B-213ENST00000593254 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
H3F3B-213ENST00000593254 INSRP06213 1382 aa18.26■□□□□ 0.51
H3F3B-213ENST00000593254 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
H3F3B-213ENST00000593254 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
H3F3B-213ENST00000593254 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
H3F3B-213ENST00000593254 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
H3F3B-213ENST00000593254 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
H3F3B-213ENST00000593254 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
H3F3B-213ENST00000593254 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
H3F3B-213ENST00000593254 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
H3F3B-213ENST00000593254 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
H3F3B-213ENST00000593254 ZNF526Q8TF50 670 aaPredicted RBP18.21■□□□□ 0.51
H3F3B-213ENST00000593254 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
H3F3B-213ENST00000593254 HMGB2P26583 209 aaKnown RBP18.2■□□□□ 0.5
H3F3B-213ENST00000593254 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
H3F3B-213ENST00000593254 PCNTO95613 3336 aa18.2■□□□□ 0.5
H3F3B-213ENST00000593254 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
H3F3B-213ENST00000593254 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
H3F3B-213ENST00000593254 ITGB4P16144 1822 aa18.19■□□□□ 0.5
H3F3B-213ENST00000593254 NCAPD2Q15021 1401 aa18.18■□□□□ 0.5
H3F3B-213ENST00000593254 KIF3CO14782 793 aa18.18■□□□□ 0.5
H3F3B-213ENST00000593254 AMIGO3Q86WK7 504 aa18.18■□□□□ 0.5
H3F3B-213ENST00000593254 PANK3Q9H999 370 aa18.18■□□□□ 0.5
H3F3B-213ENST00000593254 IGSF1Q8N6C5 1336 aa18.18■□□□□ 0.5
H3F3B-213ENST00000593254 CICQ96RK0 1608 aaPredicted RBP18.17■□□□□ 0.5
H3F3B-213ENST00000593254 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
H3F3B-213ENST00000593254 WASHC2AQ641Q2 1341 aa18.17■□□□□ 0.5
H3F3B-213ENST00000593254 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
H3F3B-213ENST00000593254 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
H3F3B-213ENST00000593254 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-213ENST00000593254 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-213ENST00000593254 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
H3F3B-213ENST00000593254 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
H3F3B-213ENST00000593254 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
H3F3B-213ENST00000593254 AK7Q96M32 723 aa18.13■□□□□ 0.49
H3F3B-213ENST00000593254 KIF13BQ9NQT8 1826 aa18.12■□□□□ 0.49
H3F3B-213ENST00000593254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
H3F3B-213ENST00000593254 CYP27B1O15528 508 aa18.12■□□□□ 0.49
H3F3B-213ENST00000593254 SMARCC1Q92922 1105 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms