RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 PLEKHO1Q53GL0 409 aaPredicted RBP29.64■■■□□ 2.33
SPHK1-210ENST00000592299 MCM10Q7L590 875 aa29.64■■■□□ 2.33
SPHK1-210ENST00000592299 JCADQ9P266 1359 aa29.62■■■□□ 2.33
SPHK1-210ENST00000592299 GNAT3A8MTJ3 354 aa29.62■■■□□ 2.33
SPHK1-210ENST00000592299 AMOTQ4VCS5 1084 aa29.62■■■□□ 2.33
SPHK1-210ENST00000592299 TSR2Q969E8 191 aaKnown RBP29.62■■■□□ 2.33
SPHK1-210ENST00000592299 LARP1Q6PKG0 1096 aaKnown RBP29.61■■■□□ 2.33
SPHK1-210ENST00000592299 NEFLP07196 543 aa29.6■■■□□ 2.33
SPHK1-210ENST00000592299 TATP17735 454 aaPredicted RBP29.6■■■□□ 2.33
SPHK1-210ENST00000592299 FANCIQ9NVI1 1328 aa29.6■■■□□ 2.33
SPHK1-210ENST00000592299 MAP3K5Q99683 1374 aa29.59■■■□□ 2.33
SPHK1-210ENST00000592299 ZNF530Q6P9A1 599 aaPredicted RBP29.59■■■□□ 2.33
SPHK1-210ENST00000592299 HTATSF1O43719 755 aaKnown RBP29.58■■■□□ 2.33
SPHK1-210ENST00000592299 GNAI1P63096 354 aa29.58■■■□□ 2.33
SPHK1-210ENST00000592299 IFT57Q9NWB7 429 aa29.57■■■□□ 2.32
SPHK1-210ENST00000592299 HSPA1LP34931 641 aa29.57■■■□□ 2.32
SPHK1-210ENST00000592299 CARD10Q9BWT7 1032 aa29.57■■■□□ 2.32
SPHK1-210ENST00000592299 MEGF6O75095 1541 aa29.56■■■□□ 2.32
SPHK1-210ENST00000592299 C1orf141Q5JVX7 400 aa29.55■■■□□ 2.32
SPHK1-210ENST00000592299 CFAP44Q96MT7 982 aa29.55■■■□□ 2.32
SPHK1-210ENST00000592299 AKAP4Q5JQC9 854 aa29.54■■■□□ 2.32
SPHK1-210ENST00000592299 USP35Q9P2H5 1018 aa29.54■■■□□ 2.32
SPHK1-210ENST00000592299 CRB1P82279 1406 aa29.53■■■□□ 2.32
SPHK1-210ENST00000592299 ZNF853P0CG23 659 aa29.52■■■□□ 2.32
SPHK1-210ENST00000592299 SPG7Q9UQ90 795 aa29.52■■■□□ 2.32
SPHK1-210ENST00000592299 EXOSC9Q06265 439 aaKnown RBP29.52■■■□□ 2.32
SPHK1-210ENST00000592299 PLCH1Q4KWH8 1693 aa29.51■■■□□ 2.32
SPHK1-210ENST00000592299 IL17REQ8NFR9 667 aa29.51■■■□□ 2.31
SPHK1-210ENST00000592299 MBIPQ9NS73 344 aa29.51■■■□□ 2.31
SPHK1-210ENST00000592299 FKBP8Q14318 412 aa29.5■■■□□ 2.31
SPHK1-210ENST00000592299 IRX6P78412 446 aaPredicted RBP29.5■■■□□ 2.31
SPHK1-210ENST00000592299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.5■■■□□ 2.31
SPHK1-210ENST00000592299 SPATA31A6Q5VVP1 1343 aa29.49■■■□□ 2.31
SPHK1-210ENST00000592299 RNF123Q5XPI4 1314 aa29.48■■■□□ 2.31
SPHK1-210ENST00000592299 IL2RBP14784 551 aa29.48■■■□□ 2.31
SPHK1-210ENST00000592299 PLEKHG2Q9H7P9 1386 aa29.47■■■□□ 2.31
SPHK1-210ENST00000592299 MPRIPQ6WCQ1 1025 aa29.47■■■□□ 2.31
SPHK1-210ENST00000592299 LGR6Q9HBX8 967 aa29.46■■■□□ 2.31
SPHK1-210ENST00000592299 OVOS2A0A0G2JMS6 1433 aa29.46■■■□□ 2.31
SPHK1-210ENST00000592299 PARP4Q9UKK3 1724 aaKnown RBP29.46■■■□□ 2.31
SPHK1-210ENST00000592299 CHL1O00533 1208 aa29.45■■■□□ 2.31
SPHK1-210ENST00000592299 RRP1P56182 461 aaKnown RBP29.45■■■□□ 2.31
SPHK1-210ENST00000592299 C8orf37Q96NL8 207 aa29.45■■■□□ 2.31
SPHK1-210ENST00000592299 MIS18AQ9NYP9 233 aa29.44■■■□□ 2.3
SPHK1-210ENST00000592299 LRRC37A3O60309 1634 aa29.44■■■□□ 2.3
SPHK1-210ENST00000592299 CT47B1P0C2W7 299 aaPredicted RBP29.43■■■□□ 2.3
SPHK1-210ENST00000592299 IFNL2Q8IZJ0 200 aa29.43■■■□□ 2.3
SPHK1-210ENST00000592299 NGLY1Q96IV0 654 aa29.43■■■□□ 2.3
SPHK1-210ENST00000592299 CEMIPQ8WUJ3 1361 aa29.43■■■□□ 2.3
SPHK1-210ENST00000592299 PKD1L3Q7Z443 1732 aa29.43■■■□□ 2.3
SPHK1-210ENST00000592299 TSPYL4Q9UJ04 414 aa29.43■■■□□ 2.3
SPHK1-210ENST00000592299 RNMTO43148 476 aaKnown RBP29.42■■■□□ 2.3
SPHK1-210ENST00000592299 PHKG2P15735 406 aa29.42■■■□□ 2.3
SPHK1-210ENST00000592299 ZCRB1Q8TBF4 217 aaKnown RBP29.42■■■□□ 2.3
SPHK1-210ENST00000592299 NRAPQ86VF7 1730 aa29.41■■■□□ 2.3
SPHK1-210ENST00000592299 BCAR3O75815 825 aa29.41■■■□□ 2.3
SPHK1-210ENST00000592299 SLIT2O94813 1529 aa29.41■■■□□ 2.3
SPHK1-210ENST00000592299 NWD2Q9ULI1 1742 aa29.41■■■□□ 2.3
SPHK1-210ENST00000592299 TEFQ10587 303 aa29.41■■■□□ 2.3
SPHK1-210ENST00000592299 TAF7Q15545 349 aaPredicted RBP29.41■■■□□ 2.3
SPHK1-210ENST00000592299 CYP27B1O15528 508 aa29.4■■■□□ 2.3
SPHK1-210ENST00000592299 RARSP54136 660 aaKnown RBP29.4■■■□□ 2.3
SPHK1-210ENST00000592299 VIRMAQ69YN4 1812 aaKnown RBP29.39■■■□□ 2.3
SPHK1-210ENST00000592299 PLIN1O60240 522 aa29.39■■■□□ 2.3
SPHK1-210ENST00000592299 LRP6O75581 1613 aa29.39■■■□□ 2.29
SPHK1-210ENST00000592299 ELL2O00472 640 aaPredicted RBP29.38■■■□□ 2.29
SPHK1-210ENST00000592299 PCDH11XQ9BZA7 1347 aa29.38■■■□□ 2.29
SPHK1-210ENST00000592299 PCDH11YQ9BZA8 1340 aa29.38■■■□□ 2.29
SPHK1-210ENST00000592299 CCDC9Q9Y3X0 531 aaKnown RBP29.38■■■□□ 2.29
SPHK1-210ENST00000592299 MEX3CQ5U5Q3 659 aaKnown RBP29.37■■■□□ 2.29
SPHK1-210ENST00000592299 TSPYL6Q8N831 410 aa29.37■■■□□ 2.29
SPHK1-210ENST00000592299 C8orf58Q8NAV2 365 aa29.36■■■□□ 2.29
SPHK1-210ENST00000592299 BCL2L13Q9BXK5 485 aa29.36■■■□□ 2.29
SPHK1-210ENST00000592299 UNC5CLQ8IV45 518 aa29.36■■■□□ 2.29
SPHK1-210ENST00000592299 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.36■■■□□ 2.29
SPHK1-210ENST00000592299 SPATA31A1Q5TZJ5 1347 aa29.35■■■□□ 2.29
SPHK1-210ENST00000592299 TWISTNBQ3B726 338 aaPredicted RBP29.35■■■□□ 2.29
SPHK1-210ENST00000592299 HSP90AB1P08238 724 aaKnown RBP29.34■■■□□ 2.29
SPHK1-210ENST00000592299 DDX54Q8TDD1 881 aaKnown RBP29.34■■■□□ 2.29
SPHK1-210ENST00000592299 BABAM1Q9NWV8 329 aa29.34■■■□□ 2.29
SPHK1-210ENST00000592299 VAMP4O75379 141 aa29.33■■■□□ 2.29
SPHK1-210ENST00000592299 KRT24Q2M2I5 525 aa29.33■■■□□ 2.29
SPHK1-210ENST00000592299 DCAF5Q96JK2 942 aa29.33■■■□□ 2.29
SPHK1-210ENST00000592299 KDM6AO15550 1401 aaPredicted RBP29.32■■■□□ 2.28
SPHK1-210ENST00000592299 SMC4Q9NTJ3 1288 aa29.31■■■□□ 2.28
SPHK1-210ENST00000592299 THRAP3Q9Y2W1 955 aaKnown RBP29.31■■■□□ 2.28
SPHK1-210ENST00000592299 SCN11AQ9UI33 1791 aa29.31■■■□□ 2.28
SPHK1-210ENST00000592299 SPATA31A5Q5VU36 1347 aa29.31■■■□□ 2.28
SPHK1-210ENST00000592299 SPATA31A7Q8IWB4 1347 aa29.31■■■□□ 2.28
SPHK1-210ENST00000592299 DISP2A7MBM2 1401 aa29.31■■■□□ 2.28
SPHK1-210ENST00000592299 BTBD11A6QL63 1104 aa29.31■■■□□ 2.28
SPHK1-210ENST00000592299 FNBP4Q8N3X1 1017 aaPredicted RBP29.31■■■□□ 2.28
SPHK1-210ENST00000592299 ADAMTS7Q9UKP4 1686 aa29.31■■■□□ 2.28
SPHK1-210ENST00000592299 ZNF428Q96B54 188 aa29.3■■■□□ 2.28
SPHK1-210ENST00000592299 BCL9LQ86UU0 1499 aa29.3■■■□□ 2.28
SPHK1-210ENST00000592299 CANXP27824 592 aaKnown RBP29.29■■■□□ 2.28
SPHK1-210ENST00000592299 SSH1Q8WYL5 1049 aa29.29■■■□□ 2.28
SPHK1-210ENST00000592299 FRAT1Q92837 279 aaPredicted RBP29.29■■■□□ 2.28
SPHK1-210ENST00000592299 USP21Q9UK80 565 aa29.29■■■□□ 2.28
SPHK1-210ENST00000592299 SHANK3Q9BYB0 1731 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms