RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 CEP350Q5VT06 3117 aa32.09■■■□□ 2.73
LSM7-206ENST00000591515 POLD1P28340 1107 aa32.08■■■□□ 2.73
LSM7-206ENST00000591515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.08■■■□□ 2.73
LSM7-206ENST00000591515 NLGN2Q8NFZ4 835 aa32.07■■■□□ 2.72
LSM7-206ENST00000591515 TMC1Q8TDI8 760 aa32.07■■■□□ 2.72
LSM7-206ENST00000591515 ANKRD24Q8TF21 1146 aa32.07■■■□□ 2.72
LSM7-206ENST00000591515 FAM208AQ9UK61 1670 aaKnown RBP32.07■■■□□ 2.72
LSM7-206ENST00000591515 CD163L1Q9NR16 1453 aa32.06■■■□□ 2.72
LSM7-206ENST00000591515 SLC27A3Q5K4L6 730 aa32.06■■■□□ 2.72
LSM7-206ENST00000591515 NME9Q86XW9 330 aa32.06■■■□□ 2.72
LSM7-206ENST00000591515 TERF2IPQ9NYB0 399 aa32.03■■■□□ 2.72
LSM7-206ENST00000591515 HDGFL2Q7Z4V5 671 aaPredicted RBP32.02■■■□□ 2.72
LSM7-206ENST00000591515 KCNQ4P56696 695 aa32.01■■■□□ 2.71
LSM7-206ENST00000591515 TFCP2L1Q9NZI6 479 aa32■■■□□ 2.71
LSM7-206ENST00000591515 RGPD2P0DJD1 1756 aa31.99■■■□□ 2.71
LSM7-206ENST00000591515 YBX3P16989 372 aaKnown RBP eCLIP31.98■■■□□ 2.71
LSM7-206ENST00000591515 DDX54Q8TDD1 881 aaKnown RBP31.98■■■□□ 2.71
LSM7-206ENST00000591515 NSD2O96028 1365 aa31.96■■■□□ 2.71
LSM7-206ENST00000591515 SLC12A5Q9H2X9 1139 aa31.95■■■□□ 2.71
LSM7-206ENST00000591515 ANKRD36BQ8N2N9 1353 aa31.94■■■□□ 2.7
LSM7-206ENST00000591515 POLR3GLQ9BT43 218 aa31.93■■■□□ 2.7
LSM7-206ENST00000591515 EDC4Q6P2E9 1401 aaKnown RBP31.92■■■□□ 2.7
LSM7-206ENST00000591515 SYTL4Q96C24 671 aaPredicted RBP31.92■■■□□ 2.7
LSM7-206ENST00000591515 PRIM1P49642 420 aaKnown RBP31.91■■■□□ 2.7
LSM7-206ENST00000591515 GRIN3BO60391 1043 aa31.9■■■□□ 2.7
LSM7-206ENST00000591515 ATP10DQ9P241 1426 aa31.9■■■□□ 2.7
LSM7-206ENST00000591515 C5P01031 1676 aa31.89■■■□□ 2.7
LSM7-206ENST00000591515 IP6K1Q92551 441 aa31.88■■■□□ 2.69
LSM7-206ENST00000591515 LTV1Q96GA3 475 aaPredicted RBP31.88■■■□□ 2.69
LSM7-206ENST00000591515 A0A1W2PP64 1363 aa31.86■■■□□ 2.69
LSM7-206ENST00000591515 CCNL1Q9UK58 526 aaPredicted RBP31.86■■■□□ 2.69
LSM7-206ENST00000591515 TAF1LQ8IZX4 1826 aa31.86■■■□□ 2.69
LSM7-206ENST00000591515 COL23A1Q86Y22 540 aaPredicted RBP31.85■■■□□ 2.69
LSM7-206ENST00000591515 MEGF6O75095 1541 aa31.85■■■□□ 2.69
LSM7-206ENST00000591515 MSH5O43196 834 aa31.82■■■□□ 2.68
LSM7-206ENST00000591515 MSL1Q68DK7 614 aa31.81■■■□□ 2.68
LSM7-206ENST00000591515 ADCY9O60503 1353 aa31.79■■■□□ 2.68
LSM7-206ENST00000591515 KIF7Q2M1P5 1343 aa31.78■■■□□ 2.68
LSM7-206ENST00000591515 ZCRB1Q8TBF4 217 aaKnown RBP31.78■■■□□ 2.68
LSM7-206ENST00000591515 MAP3K19Q56UN5 1328 aa31.76■■■□□ 2.68
LSM7-206ENST00000591515 HOXC9P31274 260 aa31.75■■■□□ 2.67
LSM7-206ENST00000591515 GPBP1L1Q9HC44 474 aaPredicted RBP31.75■■■□□ 2.67
LSM7-206ENST00000591515 TOGARAM1Q9Y4F4 1720 aa31.74■■■□□ 2.67
LSM7-206ENST00000591515 CD2APQ9Y5K6 639 aa31.73■■■□□ 2.67
LSM7-206ENST00000591515 HSPA6P17066 643 aa31.71■■■□□ 2.67
LSM7-206ENST00000591515 FBLN1P23142 703 aa31.71■■■□□ 2.67
LSM7-206ENST00000591515 UBR3Q6ZT12 1888 aa31.71■■■□□ 2.67
LSM7-206ENST00000591515 ITGB4P16144 1822 aa31.7■■■□□ 2.67
LSM7-206ENST00000591515 C4BP0C0L5 1744 aa31.69■■■□□ 2.66
LSM7-206ENST00000591515 AMPHP49418 695 aa31.68■■■□□ 2.66
LSM7-206ENST00000591515 ZNF526Q8TF50 670 aaPredicted RBP31.68■■■□□ 2.66
LSM7-206ENST00000591515 NSD3Q9BZ95 1437 aa31.66■■■□□ 2.66
LSM7-206ENST00000591515 COG3Q96JB2 828 aa31.66■■■□□ 2.66
LSM7-206ENST00000591515 PANK3Q9H999 370 aa31.66■■■□□ 2.66
LSM7-206ENST00000591515 WASHC2AQ641Q2 1341 aa31.66■■■□□ 2.66
LSM7-206ENST00000591515 RTL1A6NKG5 1358 aa31.65■■■□□ 2.66
LSM7-206ENST00000591515 NBPF6Q5VWK0 638 aa31.64■■■□□ 2.66
LSM7-206ENST00000591515 USHBP1Q8N6Y0 703 aa31.64■■■□□ 2.66
LSM7-206ENST00000591515 NBPF4Q96M43 638 aa31.64■■■□□ 2.66
LSM7-206ENST00000591515 CGNL1Q0VF96 1302 aa31.64■■■□□ 2.66
LSM7-206ENST00000591515 PALLDQ8WX93 1383 aa31.63■■■□□ 2.65
LSM7-206ENST00000591515 FLAD1Q8NFF5 587 aa31.62■■■□□ 2.65
LSM7-206ENST00000591515 CARD14Q9BXL6 1004 aa31.62■■■□□ 2.65
LSM7-206ENST00000591515 IGSF1Q8N6C5 1336 aa31.6■■■□□ 2.65
LSM7-206ENST00000591515 AMIGO3Q86WK7 504 aa31.6■■■□□ 2.65
LSM7-206ENST00000591515 WWC3Q9ULE0 1092 aa31.59■■■□□ 2.65
LSM7-206ENST00000591515 KNSTRNQ9Y448 316 aa31.59■■■□□ 2.65
LSM7-206ENST00000591515 MAP2P11137 1827 aaKnown RBP31.59■■■□□ 2.65
LSM7-206ENST00000591515 KIF20BQ96Q89 1820 aa31.59■■■□□ 2.65
LSM7-206ENST00000591515 RRS1Q15050 365 aaKnown RBP31.58■■■□□ 2.65
LSM7-206ENST00000591515 RAPGEF4Q8WZA2 1011 aa31.58■■■□□ 2.65
LSM7-206ENST00000591515 CICQ96RK0 1608 aaPredicted RBP31.57■■■□□ 2.64
LSM7-206ENST00000591515 FYB1O15117 783 aa31.57■■■□□ 2.64
LSM7-206ENST00000591515 PKD1L3Q7Z443 1732 aa31.56■■■□□ 2.64
LSM7-206ENST00000591515 PCDH11XQ9BZA7 1347 aa31.55■■■□□ 2.64
LSM7-206ENST00000591515 PCDH11YQ9BZA8 1340 aa31.55■■■□□ 2.64
LSM7-206ENST00000591515 SMG6Q86US8 1419 aaKnown RBP31.55■■■□□ 2.64
LSM7-206ENST00000591515 KIF3CO14782 793 aa31.54■■■□□ 2.64
LSM7-206ENST00000591515 TATP17735 454 aaPredicted RBP31.54■■■□□ 2.64
LSM7-206ENST00000591515 MPRIPQ6WCQ1 1025 aa31.54■■■□□ 2.64
LSM7-206ENST00000591515 GGNBP2Q9H3C7 697 aa31.54■■■□□ 2.64
LSM7-206ENST00000591515 SMIM5Q71RC9 77 aa31.53■■■□□ 2.64
LSM7-206ENST00000591515 AK7Q96M32 723 aa31.53■■■□□ 2.64
LSM7-206ENST00000591515 HMGB2P26583 209 aaKnown RBP31.52■■■□□ 2.64
LSM7-206ENST00000591515 KIAA1551Q9HCM1 1747 aa31.52■■■□□ 2.64
LSM7-206ENST00000591515 PHF14O94880 888 aa31.51■■■□□ 2.63
LSM7-206ENST00000591515 KIF13BQ9NQT8 1826 aa31.51■■■□□ 2.63
LSM7-206ENST00000591515 CYP27B1O15528 508 aa31.49■■■□□ 2.63
LSM7-206ENST00000591515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.48■■■□□ 2.63
LSM7-206ENST00000591515 N4BP2Q86UW6 1770 aaPredicted RBP31.48■■■□□ 2.63
LSM7-206ENST00000591515 INSRP06213 1382 aa31.46■■■□□ 2.63
LSM7-206ENST00000591515 SMARCC1Q92922 1105 aaPredicted RBP31.46■■■□□ 2.63
LSM7-206ENST00000591515 HSP90AB2PQ58FF8 381 aa31.45■■■□□ 2.63
LSM7-206ENST00000591515 ANKRD26Q9UPS8 1709 aa31.44■■■□□ 2.62
LSM7-206ENST00000591515 SSFA2P28290 1259 aa31.43■■■□□ 2.62
LSM7-206ENST00000591515 PIGBQ92521 554 aa31.42■■■□□ 2.62
LSM7-206ENST00000591515 FLT4P35916 1363 aa31.42■■■□□ 2.62
LSM7-206ENST00000591515 LINC00116Q8NCU8 138 aa31.41■■■□□ 2.62
LSM7-206ENST00000591515 PXDNLA1KZ92 1463 aa31.4■■■□□ 2.62
LSM7-206ENST00000591515 PER1O15534 1290 aaPredicted RBP31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms