RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 SMC5Q8IY18 1101 aa21.53■■□□□ 1.04
LSM12-204ENST00000591247 ADGRL3Q9HAR2 1447 aa21.51■■□□□ 1.03
LSM12-204ENST00000591247 GSE1Q14687 1217 aa21.51■■□□□ 1.03
LSM12-204ENST00000591247 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
LSM12-204ENST00000591247 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
LSM12-204ENST00000591247 NWD1Q149M9 1564 aa21.5■■□□□ 1.03
LSM12-204ENST00000591247 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
LSM12-204ENST00000591247 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
LSM12-204ENST00000591247 C1orf115Q9H7X2 142 aa21.49■■□□□ 1.03
LSM12-204ENST00000591247 SLC4A3P48751 1232 aa21.49■■□□□ 1.03
LSM12-204ENST00000591247 KIAA0232Q92628 1395 aa21.49■■□□□ 1.03
LSM12-204ENST00000591247 ESCO1Q5FWF5 840 aa21.48■■□□□ 1.03
LSM12-204ENST00000591247 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
LSM12-204ENST00000591247 RTF1Q92541 710 aaKnown RBP21.47■■□□□ 1.03
LSM12-204ENST00000591247 LTV1Q96GA3 475 aaPredicted RBP21.47■■□□□ 1.03
LSM12-204ENST00000591247 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
LSM12-204ENST00000591247 GAS2L2Q8NHY3 880 aa21.46■■□□□ 1.03
LSM12-204ENST00000591247 NUCB1Q02818 461 aa21.45■■□□□ 1.02
LSM12-204ENST00000591247 PSME1Q06323 249 aa21.45■■□□□ 1.02
LSM12-204ENST00000591247 RGS12O14924 1447 aa21.44■■□□□ 1.02
LSM12-204ENST00000591247 SIRT2Q8IXJ6 389 aa21.44■■□□□ 1.02
LSM12-204ENST00000591247 LTN1O94822 1766 aa21.44■■□□□ 1.02
LSM12-204ENST00000591247 CHMP4BQ9H444 224 aaKnown RBP21.44■■□□□ 1.02
LSM12-204ENST00000591247 BRPF3Q9ULD4 1205 aa21.44■■□□□ 1.02
LSM12-204ENST00000591247 TSPYL4Q9UJ04 414 aa21.43■■□□□ 1.02
LSM12-204ENST00000591247 ORAI2Q96SN7 254 aa21.43■■□□□ 1.02
LSM12-204ENST00000591247 NFAT5O94916 1531 aa21.42■■□□□ 1.02
LSM12-204ENST00000591247 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
LSM12-204ENST00000591247 USHBP1Q8N6Y0 703 aa21.41■■□□□ 1.02
LSM12-204ENST00000591247 RTL1A6NKG5 1358 aa21.41■■□□□ 1.02
LSM12-204ENST00000591247 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.41■■□□□ 1.02
LSM12-204ENST00000591247 INTS3Q68E01 1043 aaKnown RBP21.4■■□□□ 1.02
LSM12-204ENST00000591247 IP6K1Q92551 441 aa21.4■■□□□ 1.02
LSM12-204ENST00000591247 LNPKQ9C0E8 428 aa21.4■■□□□ 1.02
LSM12-204ENST00000591247 HTATSF1O43719 755 aaKnown RBP21.4■■□□□ 1.02
LSM12-204ENST00000591247 CHD1LQ86WJ1 897 aa21.4■■□□□ 1.02
LSM12-204ENST00000591247 GNAT3A8MTJ3 354 aa21.39■■□□□ 1.02
LSM12-204ENST00000591247 LRRC37A3O60309 1634 aa21.39■■□□□ 1.02
LSM12-204ENST00000591247 DAXXQ9UER7 740 aaPredicted RBP21.39■■□□□ 1.01
LSM12-204ENST00000591247 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
LSM12-204ENST00000591247 XPCQ01831 940 aaPredicted RBP21.38■■□□□ 1.01
LSM12-204ENST00000591247 IL17REQ8NFR9 667 aa21.38■■□□□ 1.01
LSM12-204ENST00000591247 MSH6P52701 1360 aa21.38■■□□□ 1.01
LSM12-204ENST00000591247 GCC1Q96CN9 775 aa21.37■■□□□ 1.01
LSM12-204ENST00000591247 PTPRCP08575 1304 aa21.37■■□□□ 1.01
LSM12-204ENST00000591247 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
LSM12-204ENST00000591247 ANKRD45Q5TZF3 282 aa21.36■■□□□ 1.01
LSM12-204ENST00000591247 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
LSM12-204ENST00000591247 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
LSM12-204ENST00000591247 G2E3Q7L622 706 aa21.35■■□□□ 1.01
LSM12-204ENST00000591247 TBC1D32Q96NH3 1257 aa21.35■■□□□ 1.01
LSM12-204ENST00000591247 ZBTB7CA1YPR0 619 aa21.35■■□□□ 1.01
LSM12-204ENST00000591247 KCNH5Q8NCM2 988 aa21.35■■□□□ 1.01
LSM12-204ENST00000591247 PROSER2Q86WR7 435 aaPredicted RBP21.34■■□□□ 1.01
LSM12-204ENST00000591247 PLEKHG5O94827 1062 aa21.32■■□□□ 1
LSM12-204ENST00000591247 UPF2Q9HAU5 1272 aaKnown RBP21.32■■□□□ 1
LSM12-204ENST00000591247 RGPD2P0DJD1 1756 aa21.32■■□□□ 1
LSM12-204ENST00000591247 ATP10DQ9P241 1426 aa21.31■■□□□ 1
LSM12-204ENST00000591247 GCP02774 474 aa21.31■■□□□ 1
LSM12-204ENST00000591247 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
LSM12-204ENST00000591247 LRRC59Q96AG4 307 aaKnown RBP21.31■■□□□ 1
LSM12-204ENST00000591247 TAF7Q15545 349 aaPredicted RBP21.3■■□□□ 1
LSM12-204ENST00000591247 MEIS3Q99687 375 aa21.3■■□□□ 1
LSM12-204ENST00000591247 F6X3S4 739 aa21.29■■□□□ 1
LSM12-204ENST00000591247 ARHGEF25Q86VW2 580 aa21.29■■□□□ 1
LSM12-204ENST00000591247 SLIT3O75094 1523 aa21.29■■□□□ 1
LSM12-204ENST00000591247 LMOD2Q6P5Q4 547 aa21.29■■□□□ 1
LSM12-204ENST00000591247 ANKRD44Q8N8A2 993 aa21.29■■□□□ 1
LSM12-204ENST00000591247 TRPM3Q9HCF6 1732 aaPredicted RBP21.28■■□□□ 1
LSM12-204ENST00000591247 MFAP1P55081 439 aaKnown RBP21.28■■□□□ 1
LSM12-204ENST00000591247 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
LSM12-204ENST00000591247 DCTPP1Q9H773 170 aa21.28■■□□□ 1
LSM12-204ENST00000591247 CEP85Q6P2H3 762 aa21.28■■□□□ 1
LSM12-204ENST00000591247 KRT28Q7Z3Y7 464 aa21.27■■□□□ 1
LSM12-204ENST00000591247 NECTIN2Q92692 538 aa21.27■■□□□ 1
LSM12-204ENST00000591247 C19orf44Q9H6X5 657 aa21.27■■□□□ 1
LSM12-204ENST00000591247 CEMIPQ8WUJ3 1361 aa21.27■□□□□ 0.99
LSM12-204ENST00000591247 DNAJC5Q9H3Z4 198 aa21.27■□□□□ 0.99
LSM12-204ENST00000591247 FAM208AQ9UK61 1670 aaKnown RBP21.26■□□□□ 0.99
LSM12-204ENST00000591247 BMP2KLQ5H9B9 411 aa21.26■□□□□ 0.99
LSM12-204ENST00000591247 SLC4A10Q6U841 1118 aa21.26■□□□□ 0.99
LSM12-204ENST00000591247 LGR6Q9HBX8 967 aa21.26■□□□□ 0.99
LSM12-204ENST00000591247 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
LSM12-204ENST00000591247 STK31Q9BXU1 1019 aa21.26■□□□□ 0.99
LSM12-204ENST00000591247 CCDC30Q5VVM6 783 aa21.25■□□□□ 0.99
LSM12-204ENST00000591247 RPAP2Q8IXW5 612 aaPredicted RBP21.25■□□□□ 0.99
LSM12-204ENST00000591247 C22orf23Q9BZE7 217 aa21.24■□□□□ 0.99
LSM12-204ENST00000591247 FRAT2O75474 233 aaPredicted RBP21.24■□□□□ 0.99
LSM12-204ENST00000591247 FLIIQ13045 1269 aa21.23■□□□□ 0.99
LSM12-204ENST00000591247 AXIN2Q9Y2T1 843 aa21.23■□□□□ 0.99
LSM12-204ENST00000591247 CCT4P50991 539 aaKnown RBP21.22■□□□□ 0.99
LSM12-204ENST00000591247 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
LSM12-204ENST00000591247 KIF1AQ12756 1690 aa21.22■□□□□ 0.99
LSM12-204ENST00000591247 BECN1Q14457 450 aa21.22■□□□□ 0.99
LSM12-204ENST00000591247 STRCP1A6NGW2 1772 aa21.21■□□□□ 0.99
LSM12-204ENST00000591247 ANKRD24Q8TF21 1146 aa21.21■□□□□ 0.99
LSM12-204ENST00000591247 UBE2Q2Q8WVN8 375 aa21.21■□□□□ 0.99
LSM12-204ENST00000591247 NCAPD2Q15021 1401 aa21.21■□□□□ 0.99
LSM12-204ENST00000591247 SOS1Q07889 1333 aaPredicted RBP21.21■□□□□ 0.99
LSM12-204ENST00000591247 FKBP5Q13451 457 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms