RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 EYA1Q99502 592 aa24.96■■□□□ 1.59
DDX39A-212ENST00000590260 BCL11BQ9C0K0 894 aaPredicted RBP24.96■■□□□ 1.59
DDX39A-212ENST00000590260 PKD1L3Q7Z443 1732 aa24.95■■□□□ 1.58
DDX39A-212ENST00000590260 ACSBG1Q96GR2 724 aa24.93■■□□□ 1.58
DDX39A-212ENST00000590260 NPC1L1Q9UHC9 1359 aa24.93■■□□□ 1.58
DDX39A-212ENST00000590260 DOT1LQ8TEK3 1739 aa24.92■■□□□ 1.58
DDX39A-212ENST00000590260 CC2D1BQ5T0F9 858 aaKnown RBP24.92■■□□□ 1.58
DDX39A-212ENST00000590260 ZCRB1Q8TBF4 217 aaKnown RBP24.92■■□□□ 1.58
DDX39A-212ENST00000590260 DDX54Q8TDD1 881 aaKnown RBP24.92■■□□□ 1.58
DDX39A-212ENST00000590260 PARD3Q8TEW0 1356 aa24.91■■□□□ 1.58
DDX39A-212ENST00000590260 BTAF1O14981 1849 aa24.91■■□□□ 1.58
DDX39A-212ENST00000590260 PROM2Q8N271 834 aa24.9■■□□□ 1.58
DDX39A-212ENST00000590260 IGSF1Q8N6C5 1336 aa24.88■■□□□ 1.57
DDX39A-212ENST00000590260 PLSCR1O15162 318 aa24.88■■□□□ 1.57
DDX39A-212ENST00000590260 TATP17735 454 aaPredicted RBP24.88■■□□□ 1.57
DDX39A-212ENST00000590260 RAPGEF4Q8WZA2 1011 aa24.88■■□□□ 1.57
DDX39A-212ENST00000590260 TOGARAM1Q9Y4F4 1720 aa24.87■■□□□ 1.57
DDX39A-212ENST00000590260 CYP27B1O15528 508 aa24.85■■□□□ 1.57
DDX39A-212ENST00000590260 PSDA5PKW4 1024 aaPredicted RBP24.84■■□□□ 1.57
DDX39A-212ENST00000590260 MTHFSP49914 203 aa24.84■■□□□ 1.57
DDX39A-212ENST00000590260 IL13P35225 146 aa24.83■■□□□ 1.57
DDX39A-212ENST00000590260 CNGB1Q14028 1251 aaPredicted RBP24.83■■□□□ 1.57
DDX39A-212ENST00000590260 COL3A1P02461 1466 aaPredicted RBP24.83■■□□□ 1.56
DDX39A-212ENST00000590260 AEBP1Q8IUX7 1158 aa24.82■■□□□ 1.56
DDX39A-212ENST00000590260 PCDH11XQ9BZA7 1347 aa24.81■■□□□ 1.56
DDX39A-212ENST00000590260 PCDH11YQ9BZA8 1340 aa24.81■■□□□ 1.56
DDX39A-212ENST00000590260 R3HDM1Q15032 1099 aaKnown RBP24.8■■□□□ 1.56
DDX39A-212ENST00000590260 PRIM1P49642 420 aaKnown RBP24.79■■□□□ 1.56
DDX39A-212ENST00000590260 ANO8Q9HCE9 1232 aaPredicted RBP24.79■■□□□ 1.56
DDX39A-212ENST00000590260 PAPPAQ13219 1627 aa24.79■■□□□ 1.56
DDX39A-212ENST00000590260 TXNRD1Q16881 649 aa24.78■■□□□ 1.56
DDX39A-212ENST00000590260 KDRP35968 1356 aa24.78■■□□□ 1.56
DDX39A-212ENST00000590260 ITGB4P16144 1822 aa24.77■■□□□ 1.56
DDX39A-212ENST00000590260 LY75O60449 1722 aa24.76■■□□□ 1.55
DDX39A-212ENST00000590260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.76■■□□□ 1.55
DDX39A-212ENST00000590260 NKX1-1Q15270 411 aaPredicted RBP24.75■■□□□ 1.55
DDX39A-212ENST00000590260 PLEKHG2Q9H7P9 1386 aa24.75■■□□□ 1.55
DDX39A-212ENST00000590260 KAT6BQ8WYB5 2073 aa24.74■■□□□ 1.55
DDX39A-212ENST00000590260 SYTL4Q96C24 671 aaPredicted RBP24.73■■□□□ 1.55
DDX39A-212ENST00000590260 LRRC4BQ9NT99 713 aa24.73■■□□□ 1.55
DDX39A-212ENST00000590260 SPG7Q9UQ90 795 aa24.73■■□□□ 1.55
DDX39A-212ENST00000590260 SRCAPQ6ZRS2 3230 aa24.73■■□□□ 1.55
DDX39A-212ENST00000590260 PHKG2P15735 406 aa24.72■■□□□ 1.55
DDX39A-212ENST00000590260 SULT6B1Q6IMI4 303 aa24.72■■□□□ 1.55
DDX39A-212ENST00000590260 LRP5O75197 1615 aa24.71■■□□□ 1.55
DDX39A-212ENST00000590260 CASZ1Q86V15 1759 aa24.7■■□□□ 1.55
DDX39A-212ENST00000590260 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
DDX39A-212ENST00000590260 DIAPH1O60610 1272 aaKnown RBP24.68■■□□□ 1.54
DDX39A-212ENST00000590260 KCNQ4P56696 695 aa24.67■■□□□ 1.54
DDX39A-212ENST00000590260 NBPF14Q5TI25 921 aa24.67■■□□□ 1.54
DDX39A-212ENST00000590260 IFNL2Q8IZJ0 200 aa24.67■■□□□ 1.54
DDX39A-212ENST00000590260 PDGFDQ9GZP0 370 aaPredicted RBP24.67■■□□□ 1.54
DDX39A-212ENST00000590260 KDM6AO15550 1401 aaPredicted RBP24.67■■□□□ 1.54
DDX39A-212ENST00000590260 HMOX1P09601 288 aa24.66■■□□□ 1.54
DDX39A-212ENST00000590260 ZNF827Q17R98 1081 aa24.64■■□□□ 1.54
DDX39A-212ENST00000590260 PLEKHO1Q53GL0 409 aaPredicted RBP24.64■■□□□ 1.54
DDX39A-212ENST00000590260 MPRIPQ6WCQ1 1025 aa24.64■■□□□ 1.54
DDX39A-212ENST00000590260 PIGBQ92521 554 aa24.64■■□□□ 1.54
DDX39A-212ENST00000590260 TUBGCP6Q96RT7 1819 aa24.63■■□□□ 1.53
DDX39A-212ENST00000590260 DDX10Q13206 875 aaKnown RBP24.62■■□□□ 1.53
DDX39A-212ENST00000590260 SLC15A2Q16348 729 aa24.62■■□□□ 1.53
DDX39A-212ENST00000590260 ZNF530Q6P9A1 599 aaPredicted RBP24.62■■□□□ 1.53
DDX39A-212ENST00000590260 AMOTQ4VCS5 1084 aa24.61■■□□□ 1.53
DDX39A-212ENST00000590260 SLC27A3Q5K4L6 730 aa24.6■■□□□ 1.53
DDX39A-212ENST00000590260 TAF1LQ8IZX4 1826 aa24.59■■□□□ 1.53
DDX39A-212ENST00000590260 PALLDQ8WX93 1383 aa24.59■■□□□ 1.53
DDX39A-212ENST00000590260 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
DDX39A-212ENST00000590260 AKT1S1Q96B36 256 aa24.59■■□□□ 1.53
DDX39A-212ENST00000590260 SCN11AQ9UI33 1791 aa24.59■■□□□ 1.53
DDX39A-212ENST00000590260 C5P01031 1676 aa24.59■■□□□ 1.53
DDX39A-212ENST00000590260 ADAMTS7Q9UKP4 1686 aa24.59■■□□□ 1.53
DDX39A-212ENST00000590260 QSER1Q2KHR3 1735 aa24.58■■□□□ 1.53
DDX39A-212ENST00000590260 STK32BQ9NY57 414 aa24.58■■□□□ 1.53
DDX39A-212ENST00000590260 VIRMAQ69YN4 1812 aaKnown RBP24.56■■□□□ 1.52
DDX39A-212ENST00000590260 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
DDX39A-212ENST00000590260 MTHFSDQ2M296 383 aaKnown RBP24.56■■□□□ 1.52
DDX39A-212ENST00000590260 DCAF5Q96JK2 942 aa24.56■■□□□ 1.52
DDX39A-212ENST00000590260 CCNL1Q9UK58 526 aaPredicted RBP24.56■■□□□ 1.52
DDX39A-212ENST00000590260 ASAP1Q9ULH1 1129 aa24.56■■□□□ 1.52
DDX39A-212ENST00000590260 ERVV-2B6SEH9 535 aa24.54■■□□□ 1.52
DDX39A-212ENST00000590260 ATG3Q9NT62 314 aa24.54■■□□□ 1.52
DDX39A-212ENST00000590260 TMOD3Q9NYL9 352 aa24.54■■□□□ 1.52
DDX39A-212ENST00000590260 HSP90AB1P08238 724 aaKnown RBP24.53■■□□□ 1.52
DDX39A-212ENST00000590260 RSPH6AQ9H0K4 717 aa24.53■■□□□ 1.52
DDX39A-212ENST00000590260 CFAP53Q96M91 514 aa24.52■■□□□ 1.52
DDX39A-212ENST00000590260 LGR6Q9HBX8 967 aa24.52■■□□□ 1.52
DDX39A-212ENST00000590260 MRC1P22897 1456 aa24.51■■□□□ 1.51
DDX39A-212ENST00000590260 AKAP4Q5JQC9 854 aa24.51■■□□□ 1.51
DDX39A-212ENST00000590260 C1orf141Q5JVX7 400 aa24.51■■□□□ 1.51
DDX39A-212ENST00000590260 PHACTR3Q96KR7 559 aa24.51■■□□□ 1.51
DDX39A-212ENST00000590260 C4BP0C0L5 1744 aa24.5■■□□□ 1.51
DDX39A-212ENST00000590260 SMARCC1Q92922 1105 aaPredicted RBP24.5■■□□□ 1.51
DDX39A-212ENST00000590260 SLC4A9Q96Q91 983 aa24.5■■□□□ 1.51
DDX39A-212ENST00000590260 PNPLA7Q6ZV29 1317 aa24.5■■□□□ 1.51
DDX39A-212ENST00000590260 ZBTB7AO95365 584 aa24.48■■□□□ 1.51
DDX39A-212ENST00000590260 ITPK1Q13572 414 aa24.48■■□□□ 1.51
DDX39A-212ENST00000590260 ZNF831Q5JPB2 1677 aa24.48■■□□□ 1.51
DDX39A-212ENST00000590260 RNMTO43148 476 aaKnown RBP24.47■■□□□ 1.51
DDX39A-212ENST00000590260 PRKAR2BP31323 418 aa24.47■■□□□ 1.51
DDX39A-212ENST00000590260 AMIGO3Q86WK7 504 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms