RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
APBA3-205ENST00000590064 CCT4P50991 539 aaKnown RBP19.41■□□□□ 0.7
APBA3-205ENST00000590064 TMEM63CQ9P1W3 806 aa19.41■□□□□ 0.7
APBA3-205ENST00000590064 FOSBP53539 338 aa19.4■□□□□ 0.7
APBA3-205ENST00000590064 NOLC1Q14978 699 aaKnown RBP eCLIP19.4■□□□□ 0.7
APBA3-205ENST00000590064 DCTPP1Q9H773 170 aa19.4■□□□□ 0.7
APBA3-205ENST00000590064 NPHP1O15259 732 aa19.4■□□□□ 0.7
APBA3-205ENST00000590064 CNTROBQ8N137 903 aa19.4■□□□□ 0.7
APBA3-205ENST00000590064 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.7
APBA3-205ENST00000590064 FERMT3Q86UX7 667 aa19.39■□□□□ 0.7
APBA3-205ENST00000590064 ANKRD44Q8N8A2 993 aa19.39■□□□□ 0.7
APBA3-205ENST00000590064 SYNMO15061 1565 aa19.39■□□□□ 0.69
APBA3-205ENST00000590064 IFIT2P09913 472 aaKnown RBP19.39■□□□□ 0.69
APBA3-205ENST00000590064 NUTM1Q86Y26 1132 aa19.39■□□□□ 0.69
APBA3-205ENST00000590064 NGDNQ8NEJ9 315 aaKnown RBP19.39■□□□□ 0.69
APBA3-205ENST00000590064 NME9Q86XW9 330 aa19.39■□□□□ 0.69
APBA3-205ENST00000590064 DDX54Q8TDD1 881 aaKnown RBP19.39■□□□□ 0.69
APBA3-205ENST00000590064 MAST1Q9Y2H9 1570 aa19.38■□□□□ 0.69
APBA3-205ENST00000590064 CAMK4Q16566 473 aa19.38■□□□□ 0.69
APBA3-205ENST00000590064 CWC27Q6UX04 472 aaKnown RBP19.38■□□□□ 0.69
APBA3-205ENST00000590064 KRT24Q2M2I5 525 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 USP48Q86UV5 1035 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 TSC1Q92574 1164 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 CCDC9Q9Y3X0 531 aaKnown RBP19.37■□□□□ 0.69
APBA3-205ENST00000590064 GSPT1P15170 499 aaKnown RBP19.37■□□□□ 0.69
APBA3-205ENST00000590064 PRIMPOLQ96LW4 560 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 GIMAP6Q6P9H5 292 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 WAPLQ7Z5K2 1190 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 CCDC83Q8IWF9 413 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 CCDC112Q8NEF3 446 aa19.37■□□□□ 0.69
APBA3-205ENST00000590064 ERVK-7P63135 1459 aa19.36■□□□□ 0.69
APBA3-205ENST00000590064 C9orf78Q9NZ63 289 aaPredicted RBP19.36■□□□□ 0.69
APBA3-205ENST00000590064 HDGFP51858 240 aaKnown RBP19.36■□□□□ 0.69
APBA3-205ENST00000590064 PDE1AP54750 535 aa19.36■□□□□ 0.69
APBA3-205ENST00000590064 SF3A1Q15459 793 aaKnown RBP19.36■□□□□ 0.69
APBA3-205ENST00000590064 C17orf53Q8N3J3 647 aaPredicted RBP19.36■□□□□ 0.69
APBA3-205ENST00000590064 TNMDQ9H2S6 317 aa19.36■□□□□ 0.69
APBA3-205ENST00000590064 PLCH2O75038 1416 aa19.36■□□□□ 0.69
APBA3-205ENST00000590064 TERF1P54274 439 aa19.35■□□□□ 0.69
APBA3-205ENST00000590064 KDM5AP29375 1690 aaKnown RBP19.35■□□□□ 0.69
APBA3-205ENST00000590064 KRT85P78386 507 aa19.35■□□□□ 0.69
APBA3-205ENST00000590064 LARP1BQ659C4 914 aaKnown RBP19.35■□□□□ 0.69
APBA3-205ENST00000590064 ZNF692Q9BU19 519 aaPredicted RBP19.35■□□□□ 0.69
APBA3-205ENST00000590064 CNPY2Q9Y2B0 182 aa19.35■□□□□ 0.69
APBA3-205ENST00000590064 ARHGEF5Q12774 1597 aa19.35■□□□□ 0.69
APBA3-205ENST00000590064 A0A1W2PP64 1363 aa19.35■□□□□ 0.69
APBA3-205ENST00000590064 JAKMIP1Q96N16 626 aaKnown RBP19.34■□□□□ 0.69
APBA3-205ENST00000590064 CASTP20810 708 aaKnown RBP19.34■□□□□ 0.69
APBA3-205ENST00000590064 CCDC30Q5VVM6 783 aa19.34■□□□□ 0.69
APBA3-205ENST00000590064 NUP62CLQ9H1M0 184 aa19.34■□□□□ 0.69
APBA3-205ENST00000590064 C16orf45Q96MC5 204 aaPredicted RBP19.34■□□□□ 0.69
APBA3-205ENST00000590064 CEBPZQ03701 1054 aaKnown RBP19.34■□□□□ 0.69
APBA3-205ENST00000590064 GPT2Q8TD30 523 aa19.34■□□□□ 0.69
APBA3-205ENST00000590064 ZNF500O60304 480 aaPredicted RBP19.33■□□□□ 0.69
APBA3-205ENST00000590064 TNNT3P45378 269 aaPredicted RBP19.33■□□□□ 0.69
APBA3-205ENST00000590064 CCDC94Q9BW85 323 aaPredicted RBP19.33■□□□□ 0.69
APBA3-205ENST00000590064 SRCIN1Q9C0H9 1055 aa19.33■□□□□ 0.69
APBA3-205ENST00000590064 CYP46A1Q9Y6A2 500 aa19.33■□□□□ 0.69
APBA3-205ENST00000590064 IGSF3O75054 1194 aa19.33■□□□□ 0.68
APBA3-205ENST00000590064 CEP85Q6P2H3 762 aa19.33■□□□□ 0.68
APBA3-205ENST00000590064 TPM4P67936 248 aa19.33■□□□□ 0.68
APBA3-205ENST00000590064 CLASRPQ8N2M8 674 aaKnown RBP19.33■□□□□ 0.68
APBA3-205ENST00000590064 STK3Q13188 491 aa19.32■□□□□ 0.68
APBA3-205ENST00000590064 IDI1Q13907 227 aa19.32■□□□□ 0.68
APBA3-205ENST00000590064 TXNDC2Q86VQ3 553 aa19.32■□□□□ 0.68
APBA3-205ENST00000590064 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
APBA3-205ENST00000590064 RNF20Q5VTR2 975 aa19.32■□□□□ 0.68
APBA3-205ENST00000590064 ESYT1Q9BSJ8 1104 aa19.32■□□□□ 0.68
APBA3-205ENST00000590064 POLKQ9UBT6 870 aa19.32■□□□□ 0.68
APBA3-205ENST00000590064 UVSSAQ2YD98 709 aa19.31■□□□□ 0.68
APBA3-205ENST00000590064 STX6O43752 255 aa19.31■□□□□ 0.68
APBA3-205ENST00000590064 MAP3K11Q16584 847 aa19.31■□□□□ 0.68
APBA3-205ENST00000590064 CKAP2LQ8IYA6 745 aa19.31■□□□□ 0.68
APBA3-205ENST00000590064 RTEL1-TNFRSF6BF6WH68 1400 aa19.31■□□□□ 0.68
APBA3-205ENST00000590064 PDCP20941 246 aa19.31■□□□□ 0.68
APBA3-205ENST00000590064 PDRG1Q9NUG6 133 aa19.31■□□□□ 0.68
APBA3-205ENST00000590064 SRGAP3O43295 1099 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 GNL2Q13823 731 aaKnown RBP19.3■□□□□ 0.68
APBA3-205ENST00000590064 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 SAMD9LQ8IVG5 1584 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 ADGRL1O94910 1474 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 RAPGEF3O95398 923 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 CCDC73Q6ZRK6 1079 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 SLC52A1Q9NWF4 448 aa19.3■□□□□ 0.68
APBA3-205ENST00000590064 UBE2HP62256 183 aa19.29■□□□□ 0.68
APBA3-205ENST00000590064 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
APBA3-205ENST00000590064 HDAC5Q9UQL6 1122 aa19.29■□□□□ 0.68
APBA3-205ENST00000590064 PPIP5K1Q6PFW1 1433 aa19.29■□□□□ 0.68
APBA3-205ENST00000590064 SMAP1Q8IYB5 467 aaPredicted RBP19.29■□□□□ 0.68
APBA3-205ENST00000590064 SPG7Q9UQ90 795 aa19.29■□□□□ 0.68
APBA3-205ENST00000590064 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
APBA3-205ENST00000590064 LRRFIP2Q9Y608 721 aaKnown RBP19.28■□□□□ 0.68
APBA3-205ENST00000590064 HDGFL1Q5TGJ6 251 aa19.28■□□□□ 0.68
APBA3-205ENST00000590064 GADD45BO75293 160 aaPredicted RBP19.28■□□□□ 0.68
APBA3-205ENST00000590064 CCAR2Q8N163 923 aaKnown RBP19.28■□□□□ 0.68
APBA3-205ENST00000590064 SPATA32Q96LK8 384 aa19.28■□□□□ 0.68
APBA3-205ENST00000590064 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
APBA3-205ENST00000590064 ATP10AO60312 1499 aa19.27■□□□□ 0.68
APBA3-205ENST00000590064 DTNBO60941 627 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms