RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 HTATSF1O43719 755 aaKnown RBP24.09■■□□□ 1.45
PRKCSH-209ENST00000589838 INTS3Q68E01 1043 aaKnown RBP24.07■■□□□ 1.44
PRKCSH-209ENST00000589838 EYA1Q99502 592 aa24.07■■□□□ 1.44
PRKCSH-209ENST00000589838 PTPRCP08575 1304 aa24.07■■□□□ 1.44
PRKCSH-209ENST00000589838 MTHFSDQ2M296 383 aaKnown RBP24.07■■□□□ 1.44
PRKCSH-209ENST00000589838 ABTB2Q8N961 1025 aa24.04■■□□□ 1.44
PRKCSH-209ENST00000589838 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
PRKCSH-209ENST00000589838 SETD1BQ9UPS6 1966 aaKnown RBP24.04■■□□□ 1.44
PRKCSH-209ENST00000589838 HOXC9P31274 260 aa24.04■■□□□ 1.44
PRKCSH-209ENST00000589838 LNPKQ9C0E8 428 aa24.04■■□□□ 1.44
PRKCSH-209ENST00000589838 PHF8Q9UPP1 1060 aa24.04■■□□□ 1.44
PRKCSH-209ENST00000589838 ANKRD45Q5TZF3 282 aa24.02■■□□□ 1.44
PRKCSH-209ENST00000589838 C1orf115Q9H7X2 142 aa24.02■■□□□ 1.44
PRKCSH-209ENST00000589838 TSPYL4Q9UJ04 414 aa24.02■■□□□ 1.44
PRKCSH-209ENST00000589838 RTL1A6NKG5 1358 aa24.02■■□□□ 1.44
PRKCSH-209ENST00000589838 NFKBIBQ15653 356 aa24■■□□□ 1.43
PRKCSH-209ENST00000589838 BMP2KLQ5H9B9 411 aa24■■□□□ 1.43
PRKCSH-209ENST00000589838 C22orf23Q9BZE7 217 aa24■■□□□ 1.43
PRKCSH-209ENST00000589838 FOXO3O43524 673 aa23.98■■□□□ 1.43
PRKCSH-209ENST00000589838 KRT24Q2M2I5 525 aa23.98■■□□□ 1.43
PRKCSH-209ENST00000589838 SIRT2Q8IXJ6 389 aa23.98■■□□□ 1.43
PRKCSH-209ENST00000589838 ADAMTSL3P82987 1691 aa23.98■■□□□ 1.43
PRKCSH-209ENST00000589838 GNAT3A8MTJ3 354 aa23.98■■□□□ 1.43
PRKCSH-209ENST00000589838 RGS12O14924 1447 aa23.97■■□□□ 1.43
PRKCSH-209ENST00000589838 MFAP1P55081 439 aaKnown RBP23.97■■□□□ 1.43
PRKCSH-209ENST00000589838 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
PRKCSH-209ENST00000589838 RPAP2Q8IXW5 612 aaPredicted RBP23.97■■□□□ 1.43
PRKCSH-209ENST00000589838 BABAM1Q9NWV8 329 aa23.97■■□□□ 1.43
PRKCSH-209ENST00000589838 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
PRKCSH-209ENST00000589838 ADGRL3Q9HAR2 1447 aa23.96■■□□□ 1.43
PRKCSH-209ENST00000589838 SLC4A2P04920 1241 aa23.96■■□□□ 1.43
PRKCSH-209ENST00000589838 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
PRKCSH-209ENST00000589838 LRRC37A3O60309 1634 aa23.96■■□□□ 1.43
PRKCSH-209ENST00000589838 EIF5BO60841 1220 aaKnown RBP23.95■■□□□ 1.42
PRKCSH-209ENST00000589838 DCTPP1Q9H773 170 aa23.95■■□□□ 1.42
PRKCSH-209ENST00000589838 ANKRD44Q8N8A2 993 aa23.94■■□□□ 1.42
PRKCSH-209ENST00000589838 NWD1Q149M9 1564 aa23.94■■□□□ 1.42
PRKCSH-209ENST00000589838 LTN1O94822 1766 aa23.94■■□□□ 1.42
PRKCSH-209ENST00000589838 MIS18AQ9NYP9 233 aa23.93■■□□□ 1.42
PRKCSH-209ENST00000589838 MAP3K5Q99683 1374 aa23.92■■□□□ 1.42
PRKCSH-209ENST00000589838 PSME1Q06323 249 aa23.92■■□□□ 1.42
PRKCSH-209ENST00000589838 KCNH5Q8NCM2 988 aa23.92■■□□□ 1.42
PRKCSH-209ENST00000589838 IP6K1Q92551 441 aa23.92■■□□□ 1.42
PRKCSH-209ENST00000589838 STK31Q9BXU1 1019 aa23.92■■□□□ 1.42
PRKCSH-209ENST00000589838 CACNA1FO60840 1977 aa23.92■■□□□ 1.42
PRKCSH-209ENST00000589838 CCT4P50991 539 aaKnown RBP23.92■■□□□ 1.42
PRKCSH-209ENST00000589838 TBC1D2Q9BYX2 928 aa23.91■■□□□ 1.42
PRKCSH-209ENST00000589838 NPHP4O75161 1426 aaPredicted RBP23.9■■□□□ 1.42
PRKCSH-209ENST00000589838 CCDC30Q5VVM6 783 aa23.9■■□□□ 1.42
PRKCSH-209ENST00000589838 TAF7Q15545 349 aaPredicted RBP23.89■■□□□ 1.41
PRKCSH-209ENST00000589838 ESCO1Q5FWF5 840 aa23.89■■□□□ 1.41
PRKCSH-209ENST00000589838 LTV1Q96GA3 475 aaPredicted RBP23.89■■□□□ 1.41
PRKCSH-209ENST00000589838 MSH6P52701 1360 aa23.89■■□□□ 1.41
PRKCSH-209ENST00000589838 RBM25P49756 843 aaKnown RBP23.88■■□□□ 1.41
PRKCSH-209ENST00000589838 ATP10DQ9P241 1426 aa23.88■■□□□ 1.41
PRKCSH-209ENST00000589838 NFAT5O94916 1531 aa23.88■■□□□ 1.41
PRKCSH-209ENST00000589838 CEP85Q6P2H3 762 aa23.87■■□□□ 1.41
PRKCSH-209ENST00000589838 HMMRO75330 724 aa23.87■■□□□ 1.41
PRKCSH-209ENST00000589838 PHRF1Q9P1Y6 1649 aaKnown RBP23.86■■□□□ 1.41
PRKCSH-209ENST00000589838 IL17REQ8NFR9 667 aa23.85■■□□□ 1.41
PRKCSH-209ENST00000589838 CHMP4AQ9BY43 222 aa23.84■■□□□ 1.41
PRKCSH-209ENST00000589838 MEIS3Q99687 375 aa23.83■■□□□ 1.41
PRKCSH-209ENST00000589838 FAM208AQ9UK61 1670 aaKnown RBP23.83■■□□□ 1.41
PRKCSH-209ENST00000589838 CDC45O75419 566 aa23.83■■□□□ 1.4
PRKCSH-209ENST00000589838 G2E3Q7L622 706 aa23.83■■□□□ 1.4
PRKCSH-209ENST00000589838 PLEKHM2Q8IWE5 1019 aa23.83■■□□□ 1.4
PRKCSH-209ENST00000589838 ANTXR1Q9H6X2 564 aa23.83■■□□□ 1.4
PRKCSH-209ENST00000589838 SLC4A10Q6U841 1118 aa23.82■■□□□ 1.4
PRKCSH-209ENST00000589838 HSCBQ8IWL3 235 aa23.82■■□□□ 1.4
PRKCSH-209ENST00000589838 SLKQ9H2G2 1235 aaPredicted RBP23.82■■□□□ 1.4
PRKCSH-209ENST00000589838 FRAT2O75474 233 aaPredicted RBP23.81■■□□□ 1.4
PRKCSH-209ENST00000589838 RBM33Q96EV2 1170 aaKnown RBP23.81■■□□□ 1.4
PRKCSH-209ENST00000589838 FLIIQ13045 1269 aa23.8■■□□□ 1.4
PRKCSH-209ENST00000589838 TBC1D9Q6ZT07 1266 aa23.8■■□□□ 1.4
PRKCSH-209ENST00000589838 GNAI3P08754 354 aa23.79■■□□□ 1.4
PRKCSH-209ENST00000589838 GSE1Q14687 1217 aa23.79■■□□□ 1.4
PRKCSH-209ENST00000589838 SNX21Q969T3 373 aa23.79■■□□□ 1.4
PRKCSH-209ENST00000589838 GNAI2P04899 355 aa23.79■■□□□ 1.4
PRKCSH-209ENST00000589838 TTC22Q5TAA0 569 aa23.79■■□□□ 1.4
PRKCSH-209ENST00000589838 FKBP5Q13451 457 aaPredicted RBP23.78■■□□□ 1.4
PRKCSH-209ENST00000589838 NBPF6Q5VWK0 638 aa23.78■■□□□ 1.4
PRKCSH-209ENST00000589838 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
PRKCSH-209ENST00000589838 NBPF4Q96M43 638 aa23.78■■□□□ 1.4
PRKCSH-209ENST00000589838 CEMIPQ8WUJ3 1361 aa23.78■■□□□ 1.4
PRKCSH-209ENST00000589838 F6X3S4 739 aa23.77■■□□□ 1.4
PRKCSH-209ENST00000589838 N4BP2Q86UW6 1770 aaPredicted RBP23.77■■□□□ 1.4
PRKCSH-209ENST00000589838 PLEKHO1Q53GL0 409 aaPredicted RBP23.76■■□□□ 1.39
PRKCSH-209ENST00000589838 PXDNLA1KZ92 1463 aa23.76■■□□□ 1.39
PRKCSH-209ENST00000589838 SLIT3O75094 1523 aa23.76■■□□□ 1.39
PRKCSH-209ENST00000589838 AMOTQ4VCS5 1084 aa23.75■■□□□ 1.39
PRKCSH-209ENST00000589838 KIF1AQ12756 1690 aa23.75■■□□□ 1.39
PRKCSH-209ENST00000589838 HOXB7P09629 217 aa23.75■■□□□ 1.39
PRKCSH-209ENST00000589838 LMO7Q8WWI1 1683 aa23.74■■□□□ 1.39
PRKCSH-209ENST00000589838 GCP02774 474 aa23.74■■□□□ 1.39
PRKCSH-209ENST00000589838 GSPT1P15170 499 aaKnown RBP23.74■■□□□ 1.39
PRKCSH-209ENST00000589838 ARHGEF25Q86VW2 580 aa23.74■■□□□ 1.39
PRKCSH-209ENST00000589838 CHMP5Q9NZZ3 219 aa23.74■■□□□ 1.39
PRKCSH-209ENST00000589838 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
PRKCSH-209ENST00000589838 AKAP4Q5JQC9 854 aa23.73■■□□□ 1.39
PRKCSH-209ENST00000589838 CASC1Q6TDU7 716 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms