RNA–Protein interactions for RNA: ENST00000589197.1

RDH13-212, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 792 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-212ENST00000589197 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
RDH13-212ENST00000589197 SF3B2Q13435 895 aaKnown RBP17.77■□□□□ 0.44
RDH13-212ENST00000589197 EZH2Q15910 746 aaKnown RBP17.77■□□□□ 0.44
RDH13-212ENST00000589197 AEBP1Q8IUX7 1158 aa17.77■□□□□ 0.44
RDH13-212ENST00000589197 RAPGEF4Q8WZA2 1011 aa17.77■□□□□ 0.44
RDH13-212ENST00000589197 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.44
RDH13-212ENST00000589197 SBF2Q86WG5 1849 aa17.77■□□□□ 0.43
RDH13-212ENST00000589197 TATP17735 454 aaPredicted RBP17.76■□□□□ 0.43
RDH13-212ENST00000589197 BCL11BQ9C0K0 894 aaPredicted RBP17.76■□□□□ 0.43
RDH13-212ENST00000589197 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
RDH13-212ENST00000589197 CYP27B1O15528 508 aa17.75■□□□□ 0.43
RDH13-212ENST00000589197 PPP2R1AP30153 589 aa17.75■□□□□ 0.43
RDH13-212ENST00000589197 BAG6P46379 1132 aa17.75■□□□□ 0.43
RDH13-212ENST00000589197 PROM2Q8N271 834 aa17.74■□□□□ 0.43
RDH13-212ENST00000589197 COL3A1P02461 1466 aaPredicted RBP17.74■□□□□ 0.43
RDH13-212ENST00000589197 SULT6B1Q6IMI4 303 aa17.71■□□□□ 0.43
RDH13-212ENST00000589197 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
RDH13-212ENST00000589197 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
RDH13-212ENST00000589197 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
RDH13-212ENST00000589197 PLSCR1O15162 318 aa17.69■□□□□ 0.42
RDH13-212ENST00000589197 KDRP35968 1356 aa17.68■□□□□ 0.42
RDH13-212ENST00000589197 HMOX1P09601 288 aa17.68■□□□□ 0.42
RDH13-212ENST00000589197 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
RDH13-212ENST00000589197 PKD1L3Q7Z443 1732 aa17.68■□□□□ 0.42
RDH13-212ENST00000589197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.42
RDH13-212ENST00000589197 NHSQ6T4R5 1651 aa17.67■□□□□ 0.42
RDH13-212ENST00000589197 PHKG2P15735 406 aa17.67■□□□□ 0.42
RDH13-212ENST00000589197 SPG7Q9UQ90 795 aa17.67■□□□□ 0.42
RDH13-212ENST00000589197 PCDH11XQ9BZA7 1347 aa17.67■□□□□ 0.42
RDH13-212ENST00000589197 PCDH11YQ9BZA8 1340 aa17.67■□□□□ 0.42
RDH13-212ENST00000589197 ZNF316A6NFI3 1004 aaPredicted RBP17.64■□□□□ 0.41
RDH13-212ENST00000589197 TXNRD1Q16881 649 aa17.64■□□□□ 0.41
RDH13-212ENST00000589197 PLEKHO1Q53GL0 409 aaPredicted RBP17.63■□□□□ 0.41
RDH13-212ENST00000589197 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
RDH13-212ENST00000589197 SYTL4Q96C24 671 aaPredicted RBP17.63■□□□□ 0.41
RDH13-212ENST00000589197 RREB1Q92766 1687 aa17.63■□□□□ 0.41
RDH13-212ENST00000589197 DOT1LQ8TEK3 1739 aa17.63■□□□□ 0.41
RDH13-212ENST00000589197 TOGARAM1Q9Y4F4 1720 aa17.63■□□□□ 0.41
RDH13-212ENST00000589197 PSDA5PKW4 1024 aaPredicted RBP17.62■□□□□ 0.41
RDH13-212ENST00000589197 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
RDH13-212ENST00000589197 LRRC4BQ9NT99 713 aa17.62■□□□□ 0.41
RDH13-212ENST00000589197 BTAF1O14981 1849 aa17.61■□□□□ 0.41
RDH13-212ENST00000589197 KCNQ4P56696 695 aa17.61■□□□□ 0.41
RDH13-212ENST00000589197 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
RDH13-212ENST00000589197 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
RDH13-212ENST00000589197 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
RDH13-212ENST00000589197 ZNF530Q6P9A1 599 aaPredicted RBP17.6■□□□□ 0.41
RDH13-212ENST00000589197 PIGBQ92521 554 aa17.6■□□□□ 0.41
RDH13-212ENST00000589197 ANO8Q9HCE9 1232 aaPredicted RBP17.6■□□□□ 0.41
RDH13-212ENST00000589197 PLEKHG2Q9H7P9 1386 aa17.6■□□□□ 0.41
RDH13-212ENST00000589197 R3HDM1Q15032 1099 aaKnown RBP17.59■□□□□ 0.41
RDH13-212ENST00000589197 RALBP1Q15311 655 aa17.59■□□□□ 0.41
RDH13-212ENST00000589197 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
RDH13-212ENST00000589197 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
RDH13-212ENST00000589197 CFAP53Q96M91 514 aa17.59■□□□□ 0.41
RDH13-212ENST00000589197 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
RDH13-212ENST00000589197 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.41
RDH13-212ENST00000589197 RGPD3A6NKT7 1758 aaPredicted RBP17.58■□□□□ 0.4
RDH13-212ENST00000589197 RGPD4Q7Z3J3 1758 aa17.58■□□□□ 0.4
RDH13-212ENST00000589197 LGR6Q9HBX8 967 aa17.57■□□□□ 0.4
RDH13-212ENST00000589197 PRKRIP1Q9H875 184 aaPredicted RBP17.56■□□□□ 0.4
RDH13-212ENST00000589197 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
RDH13-212ENST00000589197 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
RDH13-212ENST00000589197 PDGFDQ9GZP0 370 aaPredicted RBP17.55■□□□□ 0.4
RDH13-212ENST00000589197 ASAP1Q9ULH1 1129 aa17.55■□□□□ 0.4
RDH13-212ENST00000589197 ITGB4P16144 1822 aa17.55■□□□□ 0.4
RDH13-212ENST00000589197 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
RDH13-212ENST00000589197 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
RDH13-212ENST00000589197 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
RDH13-212ENST00000589197 AKAP4Q5JQC9 854 aa17.54■□□□□ 0.4
RDH13-212ENST00000589197 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
RDH13-212ENST00000589197 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
RDH13-212ENST00000589197 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
RDH13-212ENST00000589197 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
RDH13-212ENST00000589197 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
RDH13-212ENST00000589197 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.4
RDH13-212ENST00000589197 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
RDH13-212ENST00000589197 RNMTO43148 476 aaKnown RBP17.51■□□□□ 0.39
RDH13-212ENST00000589197 LY75O60449 1722 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 FCHSD2O94868 740 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 HSP90AB1P08238 724 aaKnown RBP17.51■□□□□ 0.39
RDH13-212ENST00000589197 NBPF14Q5TI25 921 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 NFATC2IPQ8NCF5 419 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 SLC4A9Q96Q91 983 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 PLEKHF1Q96S99 279 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 TMOD3Q9NYL9 352 aa17.51■□□□□ 0.39
RDH13-212ENST00000589197 PAPPAQ13219 1627 aa17.5■□□□□ 0.39
RDH13-212ENST00000589197 SLC15A2Q16348 729 aa17.5■□□□□ 0.39
RDH13-212ENST00000589197 CCDC184Q52MB2 194 aa17.5■□□□□ 0.39
RDH13-212ENST00000589197 SLC27A3Q5K4L6 730 aa17.5■□□□□ 0.39
RDH13-212ENST00000589197 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
RDH13-212ENST00000589197 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
RDH13-212ENST00000589197 CABP4P57796 275 aa17.49■□□□□ 0.39
RDH13-212ENST00000589197 CCNL1Q9UK58 526 aaPredicted RBP17.49■□□□□ 0.39
RDH13-212ENST00000589197 ITPK1Q13572 414 aa17.47■□□□□ 0.39
RDH13-212ENST00000589197 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
RDH13-212ENST00000589197 ADAMTS7Q9UKP4 1686 aa17.46■□□□□ 0.39
RDH13-212ENST00000589197 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
RDH13-212ENST00000589197 SMARCC1Q92922 1105 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms