RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 BCL11BQ9C0K0 894 aaPredicted RBP25.45■■□□□ 1.66
ERCC1-207ENST00000588738 SHANK3Q9BYB0 1731 aa25.44■■□□□ 1.66
ERCC1-207ENST00000588738 IGSF1Q8N6C5 1336 aa25.43■■□□□ 1.66
ERCC1-207ENST00000588738 KAT6BQ8WYB5 2073 aa25.43■■□□□ 1.66
ERCC1-207ENST00000588738 DDX10Q13206 875 aaKnown RBP25.41■■□□□ 1.66
ERCC1-207ENST00000588738 IL13P35225 146 aa25.4■■□□□ 1.66
ERCC1-207ENST00000588738 PCDH11XQ9BZA7 1347 aa25.39■■□□□ 1.66
ERCC1-207ENST00000588738 PCDH11YQ9BZA8 1340 aa25.39■■□□□ 1.66
ERCC1-207ENST00000588738 NHSQ6T4R5 1651 aa25.39■■□□□ 1.66
ERCC1-207ENST00000588738 ACSBG1Q96GR2 724 aa25.39■■□□□ 1.66
ERCC1-207ENST00000588738 CAMKK2Q96RR4 588 aa25.39■■□□□ 1.66
ERCC1-207ENST00000588738 SPG7Q9UQ90 795 aa25.39■■□□□ 1.66
ERCC1-207ENST00000588738 PKD1L3Q7Z443 1732 aa25.39■■□□□ 1.65
ERCC1-207ENST00000588738 KCNQ2O43526 872 aa25.38■■□□□ 1.65
ERCC1-207ENST00000588738 EZH2Q15910 746 aaKnown RBP25.38■■□□□ 1.65
ERCC1-207ENST00000588738 PTF1AQ7RTS3 328 aa25.38■■□□□ 1.65
ERCC1-207ENST00000588738 PARD3Q8TEW0 1356 aa25.38■■□□□ 1.65
ERCC1-207ENST00000588738 DIAPH1O60610 1272 aaKnown RBP25.37■■□□□ 1.65
ERCC1-207ENST00000588738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.37■■□□□ 1.65
ERCC1-207ENST00000588738 PLSCR1O15162 318 aa25.36■■□□□ 1.65
ERCC1-207ENST00000588738 PLEKHG2Q9H7P9 1386 aa25.35■■□□□ 1.65
ERCC1-207ENST00000588738 RGPD3A6NKT7 1758 aaPredicted RBP25.34■■□□□ 1.65
ERCC1-207ENST00000588738 RGPD4Q7Z3J3 1758 aa25.34■■□□□ 1.65
ERCC1-207ENST00000588738 PPP2R1AP30153 589 aa25.34■■□□□ 1.65
ERCC1-207ENST00000588738 SULT6B1Q6IMI4 303 aa25.34■■□□□ 1.65
ERCC1-207ENST00000588738 CFAP53Q96M91 514 aa25.34■■□□□ 1.65
ERCC1-207ENST00000588738 CYP27B1O15528 508 aa25.33■■□□□ 1.65
ERCC1-207ENST00000588738 DOT1LQ8TEK3 1739 aa25.33■■□□□ 1.65
ERCC1-207ENST00000588738 AEBP1Q8IUX7 1158 aa25.32■■□□□ 1.64
ERCC1-207ENST00000588738 BTAF1O14981 1849 aa25.31■■□□□ 1.64
ERCC1-207ENST00000588738 PRIM1P49642 420 aaKnown RBP25.31■■□□□ 1.64
ERCC1-207ENST00000588738 SYTL4Q96C24 671 aaPredicted RBP25.31■■□□□ 1.64
ERCC1-207ENST00000588738 RREB1Q92766 1687 aa25.31■■□□□ 1.64
ERCC1-207ENST00000588738 KDRP35968 1356 aa25.31■■□□□ 1.64
ERCC1-207ENST00000588738 PLEKHO1Q53GL0 409 aaPredicted RBP25.3■■□□□ 1.64
ERCC1-207ENST00000588738 COL3A1P02461 1466 aaPredicted RBP25.29■■□□□ 1.64
ERCC1-207ENST00000588738 AMOTQ4VCS5 1084 aa25.29■■□□□ 1.64
ERCC1-207ENST00000588738 IFNL2Q8IZJ0 200 aa25.29■■□□□ 1.64
ERCC1-207ENST00000588738 NKX1-1Q15270 411 aaPredicted RBP25.28■■□□□ 1.64
ERCC1-207ENST00000588738 U2SURPO15042 1029 aaKnown RBP25.26■■□□□ 1.63
ERCC1-207ENST00000588738 HMOX1P09601 288 aa25.26■■□□□ 1.63
ERCC1-207ENST00000588738 PHKG2P15735 406 aa25.26■■□□□ 1.63
ERCC1-207ENST00000588738 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
ERCC1-207ENST00000588738 RALBP1Q15311 655 aa25.25■■□□□ 1.63
ERCC1-207ENST00000588738 ZNF316A6NFI3 1004 aaPredicted RBP25.24■■□□□ 1.63
ERCC1-207ENST00000588738 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
ERCC1-207ENST00000588738 TXNRD1Q16881 649 aa25.23■■□□□ 1.63
ERCC1-207ENST00000588738 NBPF14Q5TI25 921 aa25.23■■□□□ 1.63
ERCC1-207ENST00000588738 ZNF530Q6P9A1 599 aaPredicted RBP25.23■■□□□ 1.63
ERCC1-207ENST00000588738 PROM2Q8N271 834 aa25.23■■□□□ 1.63
ERCC1-207ENST00000588738 ITGB4P16144 1822 aa25.22■■□□□ 1.63
ERCC1-207ENST00000588738 HSP90AB1P08238 724 aaKnown RBP25.22■■□□□ 1.63
ERCC1-207ENST00000588738 TOGARAM1Q9Y4F4 1720 aa25.21■■□□□ 1.63
ERCC1-207ENST00000588738 C1orf141Q5JVX7 400 aa25.21■■□□□ 1.63
ERCC1-207ENST00000588738 MPRIPQ6WCQ1 1025 aa25.2■■□□□ 1.62
ERCC1-207ENST00000588738 DCAF5Q96JK2 942 aa25.18■■□□□ 1.62
ERCC1-207ENST00000588738 PSDA5PKW4 1024 aaPredicted RBP25.17■■□□□ 1.62
ERCC1-207ENST00000588738 R3HDM1Q15032 1099 aaKnown RBP25.17■■□□□ 1.62
ERCC1-207ENST00000588738 LY75O60449 1722 aa25.15■■□□□ 1.62
ERCC1-207ENST00000588738 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
ERCC1-207ENST00000588738 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
ERCC1-207ENST00000588738 TMOD3Q9NYL9 352 aa25.15■■□□□ 1.62
ERCC1-207ENST00000588738 ERVV-2B6SEH9 535 aa25.14■■□□□ 1.62
ERCC1-207ENST00000588738 AKAP4Q5JQC9 854 aa25.14■■□□□ 1.62
ERCC1-207ENST00000588738 SLC27A3Q5K4L6 730 aa25.14■■□□□ 1.62
ERCC1-207ENST00000588738 PIGBQ92521 554 aa25.14■■□□□ 1.62
ERCC1-207ENST00000588738 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
ERCC1-207ENST00000588738 MTHFSDQ2M296 383 aaKnown RBP25.12■■□□□ 1.61
ERCC1-207ENST00000588738 SMARCC1Q92922 1105 aaPredicted RBP25.12■■□□□ 1.61
ERCC1-207ENST00000588738 FCHSD2O94868 740 aa25.11■■□□□ 1.61
ERCC1-207ENST00000588738 RSPH6AQ9H0K4 717 aa25.11■■□□□ 1.61
ERCC1-207ENST00000588738 LRRC4BQ9NT99 713 aa25.11■■□□□ 1.61
ERCC1-207ENST00000588738 PRKAR2BP31323 418 aa25.1■■□□□ 1.61
ERCC1-207ENST00000588738 PRKRIP1Q9H875 184 aaPredicted RBP25.1■■□□□ 1.61
ERCC1-207ENST00000588738 STK32BQ9NY57 414 aa25.1■■□□□ 1.61
ERCC1-207ENST00000588738 SCN11AQ9UI33 1791 aa25.1■■□□□ 1.61
ERCC1-207ENST00000588738 KDM6AO15550 1401 aaPredicted RBP25.1■■□□□ 1.61
ERCC1-207ENST00000588738 CABP4P57796 275 aa25.09■■□□□ 1.61
ERCC1-207ENST00000588738 ANO8Q9HCE9 1232 aaPredicted RBP25.09■■□□□ 1.61
ERCC1-207ENST00000588738 CCNL1Q9UK58 526 aaPredicted RBP25.09■■□□□ 1.61
ERCC1-207ENST00000588738 PALLDQ8WX93 1383 aa25.08■■□□□ 1.61
ERCC1-207ENST00000588738 GAS2L2Q8NHY3 880 aa25.08■■□□□ 1.61
ERCC1-207ENST00000588738 VIRMAQ69YN4 1812 aaKnown RBP25.07■■□□□ 1.6
ERCC1-207ENST00000588738 HMGB2P26583 209 aaKnown RBP25.07■■□□□ 1.6
ERCC1-207ENST00000588738 KCNQ4P56696 695 aa25.06■■□□□ 1.6
ERCC1-207ENST00000588738 SLC15A2Q16348 729 aa25.06■■□□□ 1.6
ERCC1-207ENST00000588738 PAPPAQ13219 1627 aa25.05■■□□□ 1.6
ERCC1-207ENST00000588738 PHACTR3Q96KR7 559 aa25.05■■□□□ 1.6
ERCC1-207ENST00000588738 ASAP1Q9ULH1 1129 aa25.05■■□□□ 1.6
ERCC1-207ENST00000588738 NFATC2IPQ8NCF5 419 aa25.04■■□□□ 1.6
ERCC1-207ENST00000588738 LGR6Q9HBX8 967 aa25.04■■□□□ 1.6
ERCC1-207ENST00000588738 GNAT3A8MTJ3 354 aa25.03■■□□□ 1.6
ERCC1-207ENST00000588738 RNMTO43148 476 aaKnown RBP25.03■■□□□ 1.6
ERCC1-207ENST00000588738 ATG3Q9NT62 314 aa25.03■■□□□ 1.6
ERCC1-207ENST00000588738 NEFMP07197 916 aa25.02■■□□□ 1.6
ERCC1-207ENST00000588738 PNNQ9H307 717 aaKnown RBP25.02■■□□□ 1.6
ERCC1-207ENST00000588738 MAP3K5Q99683 1374 aa25.02■■□□□ 1.6
ERCC1-207ENST00000588738 ADAMTS7Q9UKP4 1686 aa25.01■■□□□ 1.59
ERCC1-207ENST00000588738 TAF1LQ8IZX4 1826 aa25■■□□□ 1.59
ERCC1-207ENST00000588738 LOC102724428A0A0B4J2F2 783 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms