RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 CT47B1P0C2W7 299 aaPredicted RBP7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 MMS22LQ6ZRQ5 1243 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 HFM1A2PYH4 1435 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 EPRSP07814 1512 aaKnown RBP7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 UGGT2Q9NYU1 1516 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 FBLN2P98095 1184 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 C1QTNF12Q5T7M4 302 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 DNAJC14Q6Y2X3 702 aaPredicted RBP7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 PAIP2Q9BPZ3 127 aaKnown RBP7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 TSPY26PQ9H489 355 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 PYCARDQ9ULZ3 195 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 PTPRCP08575 1304 aa7.75□□□□□ -1.17
AP000547.3-204ENST00000588548 ARHGEF11O15085 1522 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 WDR62O43379 1518 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 CPP00450 1065 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 RBM5P52756 815 aaKnown RBP eCLIP7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 DUSP27Q5VZP5 1158 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 FBXO38Q6PIJ6 1188 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 GOLGA5Q8TBA6 731 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 TPM3P06753 285 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 NUCB2P80303 420 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 MORC1Q86VD1 984 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 PPM1EQ8WY54 764 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 KIF2CQ99661 725 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 NUCKS1Q9H1E3 243 aaKnown RBP7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 CWC22Q9HCG8 908 aaKnown RBP7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 CGNL1Q0VF96 1302 aa7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 ZNF644Q9H582 1327 aaPredicted RBP7.74□□□□□ -1.17
AP000547.3-204ENST00000588548 EHBP1L1Q8N3D4 1523 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 SHROOM2Q13796 1616 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 CYP2E1P05181 493 aaPredicted RBP7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 TPM4P67936 248 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 IRX1P78414 480 aaPredicted RBP7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 FAXDC2Q96IV6 333 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 DISP1Q96F81 1524 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 KDM6BO15054 1643 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 C21orf2O43822 256 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 SPAG9O60271 1321 aaKnown RBP7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 PLA2G4AP47712 749 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 CCT2P78371 535 aaKnown RBP7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 GPS2Q13227 327 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 JAKMIP3Q5VZ66 844 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 SUPT6HQ7KZ85 1726 aaKnown RBP7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 CCDC112Q8NEF3 446 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 TATDN2Q93075 761 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 L3MBTL2Q969R5 705 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 CLUAP1Q96AJ1 413 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 IFT140Q96RY7 1462 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 KCNF1Q9H3M0 494 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 PDZRN3Q9UPQ7 1066 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 FHOD1Q9Y613 1164 aa7.73□□□□□ -1.17
AP000547.3-204ENST00000588548 DENND4BO75064 1496 aaPredicted RBP7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 K7ELQ4 463 aaPredicted RBP7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 ADCY5O95622 1261 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 NBPF8Q3BBV2 869 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 NLRP13Q86W25 1043 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 GTF3C6Q969F1 213 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 SMARCE1Q969G3 411 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 SCP2P22307 547 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 TTC19Q6DKK2 380 aaPredicted RBP7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 TSHZ1Q6ZSZ6 1077 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 TMTC2Q8N394 836 aa7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 TEX13AQ9BXU3 409 aaPredicted RBP7.72□□□□□ -1.17
AP000547.3-204ENST00000588548 PRPF40AO75400 957 aaKnown RBP7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 ST5P78524 1137 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 GAS2L2Q8NHY3 880 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 ERCC4Q92889 916 aaPredicted RBP7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 ZNF428Q96B54 188 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 ETAA1Q9NY74 926 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 V9GYY5 206 aaPredicted RBP7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 E9PCH4 1651 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 HECW1Q76N89 1606 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 SMC2O95347 1197 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 NAIF1Q69YI7 327 aaPredicted RBP7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 PMFBP1Q8TBY8 1022 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 MIEF2Q96C03 454 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 PSD3Q9NYI0 1048 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 USP25Q9UHP3 1055 aa7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.18
AP000547.3-204ENST00000588548 ANKRD18BA2A2Z9 1011 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 EIF3CLB5ME19 914 aaKnown RBP7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 MBD3O95983 291 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 TPM1P09493 284 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 PNMA6AP0CW24 399 aaPredicted RBP7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 H2AFXP16104 143 aaPredicted RBP7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 ERCC3P19447 782 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 PAX7P23759 505 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 ADCY2Q08462 1091 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 RNF20Q5VTR2 975 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 MKL1Q969V6 931 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 EIF3CQ99613 913 aaKnown RBP7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 UBXN6Q9BZV1 441 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 ZSCAN16Q9H4T2 348 aaPredicted RBP7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 GRIN2AQ12879 1464 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 ANKRD36BQ8N2N9 1353 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 KIAA0586Q9BVV6 1533 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 CD2BP2O95400 341 aaKnown RBP7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 CORO7P57737 925 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 PDE3AQ14432 1141 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms