RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
CNTD1-204ENST00000588408 API5Q9BZZ5 524 aaKnown RBP17.45■□□□□ 0.38
CNTD1-204ENST00000588408 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
CNTD1-204ENST00000588408 KDRP35968 1356 aa17.45■□□□□ 0.38
CNTD1-204ENST00000588408 CHD2O14647 1828 aaKnown RBP17.45■□□□□ 0.38
CNTD1-204ENST00000588408 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
CNTD1-204ENST00000588408 HOXC9P31274 260 aa17.44■□□□□ 0.38
CNTD1-204ENST00000588408 ANKARQ7Z5J8 1434 aa17.44■□□□□ 0.38
CNTD1-204ENST00000588408 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
CNTD1-204ENST00000588408 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
CNTD1-204ENST00000588408 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
CNTD1-204ENST00000588408 G2E3Q7L622 706 aa17.42■□□□□ 0.38
CNTD1-204ENST00000588408 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
CNTD1-204ENST00000588408 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
CNTD1-204ENST00000588408 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
CNTD1-204ENST00000588408 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
CNTD1-204ENST00000588408 FRAT2O75474 233 aaPredicted RBP17.41■□□□□ 0.38
CNTD1-204ENST00000588408 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
CNTD1-204ENST00000588408 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
CNTD1-204ENST00000588408 TBC1D2Q9BYX2 928 aa17.41■□□□□ 0.38
CNTD1-204ENST00000588408 C22orf23Q9BZE7 217 aa17.41■□□□□ 0.38
CNTD1-204ENST00000588408 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
CNTD1-204ENST00000588408 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
CNTD1-204ENST00000588408 PHF8Q9UPP1 1060 aa17.4■□□□□ 0.38
CNTD1-204ENST00000588408 LTN1O94822 1766 aa17.4■□□□□ 0.38
CNTD1-204ENST00000588408 PLEKHG5O94827 1062 aa17.4■□□□□ 0.38
CNTD1-204ENST00000588408 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
CNTD1-204ENST00000588408 MSH6P52701 1360 aa17.4■□□□□ 0.38
CNTD1-204ENST00000588408 F6X3S4 739 aa17.39■□□□□ 0.37
CNTD1-204ENST00000588408 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
CNTD1-204ENST00000588408 MEIS3Q99687 375 aa17.38■□□□□ 0.37
CNTD1-204ENST00000588408 BECN1Q14457 450 aa17.38■□□□□ 0.37
CNTD1-204ENST00000588408 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
CNTD1-204ENST00000588408 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
CNTD1-204ENST00000588408 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
CNTD1-204ENST00000588408 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
CNTD1-204ENST00000588408 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
CNTD1-204ENST00000588408 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
CNTD1-204ENST00000588408 XPCQ01831 940 aaPredicted RBP17.36■□□□□ 0.37
CNTD1-204ENST00000588408 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
CNTD1-204ENST00000588408 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
CNTD1-204ENST00000588408 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
CNTD1-204ENST00000588408 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
CNTD1-204ENST00000588408 RGPD2P0DJD1 1756 aa17.35■□□□□ 0.37
CNTD1-204ENST00000588408 LRRC37A3O60309 1634 aa17.35■□□□□ 0.37
CNTD1-204ENST00000588408 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
CNTD1-204ENST00000588408 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
CNTD1-204ENST00000588408 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
CNTD1-204ENST00000588408 ANTXR1Q9H6X2 564 aa17.35■□□□□ 0.37
CNTD1-204ENST00000588408 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
CNTD1-204ENST00000588408 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
CNTD1-204ENST00000588408 APBB1O00213 710 aa17.34■□□□□ 0.37
CNTD1-204ENST00000588408 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
CNTD1-204ENST00000588408 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
CNTD1-204ENST00000588408 PTPRCP08575 1304 aa17.34■□□□□ 0.37
CNTD1-204ENST00000588408 ANKRD44Q8N8A2 993 aa17.33■□□□□ 0.37
CNTD1-204ENST00000588408 DCTPP1Q9H773 170 aa17.33■□□□□ 0.37
CNTD1-204ENST00000588408 ORAI2Q96SN7 254 aa17.33■□□□□ 0.36
CNTD1-204ENST00000588408 SMARCA5O60264 1052 aaPredicted RBP17.32■□□□□ 0.36
CNTD1-204ENST00000588408 PSME1Q06323 249 aa17.32■□□□□ 0.36
CNTD1-204ENST00000588408 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
CNTD1-204ENST00000588408 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
CNTD1-204ENST00000588408 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
CNTD1-204ENST00000588408 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
CNTD1-204ENST00000588408 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
CNTD1-204ENST00000588408 NFAT5O94916 1531 aa17.32■□□□□ 0.36
CNTD1-204ENST00000588408 TBC1D9Q6ZT07 1266 aa17.31■□□□□ 0.36
CNTD1-204ENST00000588408 PLEKHM2Q8IWE5 1019 aa17.31■□□□□ 0.36
CNTD1-204ENST00000588408 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
CNTD1-204ENST00000588408 LRRC59Q96AG4 307 aaKnown RBP17.31■□□□□ 0.36
CNTD1-204ENST00000588408 ADGRL3Q9HAR2 1447 aa17.31■□□□□ 0.36
CNTD1-204ENST00000588408 FAM208AQ9UK61 1670 aaKnown RBP17.31■□□□□ 0.36
CNTD1-204ENST00000588408 IP6K1Q92551 441 aa17.29■□□□□ 0.36
CNTD1-204ENST00000588408 HTATSF1O43719 755 aaKnown RBP17.28■□□□□ 0.36
CNTD1-204ENST00000588408 LGR6Q9HBX8 967 aa17.28■□□□□ 0.36
CNTD1-204ENST00000588408 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
CNTD1-204ENST00000588408 RPAP2Q8IXW5 612 aaPredicted RBP17.28■□□□□ 0.36
CNTD1-204ENST00000588408 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.36
CNTD1-204ENST00000588408 FLIIQ13045 1269 aa17.27■□□□□ 0.36
CNTD1-204ENST00000588408 KIF2CQ99661 725 aa17.27■□□□□ 0.36
CNTD1-204ENST00000588408 TAF7Q15545 349 aaPredicted RBP17.26■□□□□ 0.35
CNTD1-204ENST00000588408 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
CNTD1-204ENST00000588408 FKBP5Q13451 457 aaPredicted RBP17.26■□□□□ 0.35
CNTD1-204ENST00000588408 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
CNTD1-204ENST00000588408 GSE1Q14687 1217 aa17.25■□□□□ 0.35
CNTD1-204ENST00000588408 KCNQ3O43525 872 aa17.24■□□□□ 0.35
CNTD1-204ENST00000588408 TTC22Q5TAA0 569 aa17.24■□□□□ 0.35
CNTD1-204ENST00000588408 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
CNTD1-204ENST00000588408 CD2BP2O95400 341 aaKnown RBP17.24■□□□□ 0.35
CNTD1-204ENST00000588408 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
CNTD1-204ENST00000588408 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
CNTD1-204ENST00000588408 CCT4P50991 539 aaKnown RBP17.23■□□□□ 0.35
CNTD1-204ENST00000588408 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
CNTD1-204ENST00000588408 CDC45O75419 566 aa17.22■□□□□ 0.35
CNTD1-204ENST00000588408 GCP02774 474 aa17.22■□□□□ 0.35
CNTD1-204ENST00000588408 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
CNTD1-204ENST00000588408 CACNA1FO60840 1977 aa17.22■□□□□ 0.35
CNTD1-204ENST00000588408 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
CNTD1-204ENST00000588408 CEMIPQ8WUJ3 1361 aa17.21■□□□□ 0.35
CNTD1-204ENST00000588408 PNMA6EA0A0J9YXQ4 647 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms