RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 TCERG1O14776 1098 aaKnown RBP12.19□□□□□ -0.46
LINC01539-201ENST00000587904 SOX12O15370 315 aa12.19□□□□□ -0.46
LINC01539-201ENST00000587904 TPM2P07951 284 aa12.19□□□□□ -0.46
LINC01539-201ENST00000587904 L1TD1Q5T7N2 865 aaKnown RBP12.19□□□□□ -0.46
LINC01539-201ENST00000587904 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
LINC01539-201ENST00000587904 AEBP1Q8IUX7 1158 aa12.19□□□□□ -0.46
LINC01539-201ENST00000587904 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
LINC01539-201ENST00000587904 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
LINC01539-201ENST00000587904 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
LINC01539-201ENST00000587904 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
LINC01539-201ENST00000587904 SMC4Q9NTJ3 1288 aa12.18□□□□□ -0.46
LINC01539-201ENST00000587904 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
LINC01539-201ENST00000587904 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
LINC01539-201ENST00000587904 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
LINC01539-201ENST00000587904 GAS2L2Q8NHY3 880 aa12.17□□□□□ -0.46
LINC01539-201ENST00000587904 ALS2Q96Q42 1657 aa12.17□□□□□ -0.46
LINC01539-201ENST00000587904 USP19O94966 1318 aa12.17□□□□□ -0.46
LINC01539-201ENST00000587904 ATF3P18847 181 aa12.17□□□□□ -0.46
LINC01539-201ENST00000587904 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
LINC01539-201ENST00000587904 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
LINC01539-201ENST00000587904 LRRC37A3O60309 1634 aa12.16□□□□□ -0.46
LINC01539-201ENST00000587904 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
LINC01539-201ENST00000587904 SSH1Q8WYL5 1049 aa12.16□□□□□ -0.46
LINC01539-201ENST00000587904 IP6K1Q92551 441 aa12.16□□□□□ -0.46
LINC01539-201ENST00000587904 ORAI2Q96SN7 254 aa12.16□□□□□ -0.46
LINC01539-201ENST00000587904 EYA1Q99502 592 aa12.16□□□□□ -0.46
LINC01539-201ENST00000587904 HTATSF1O43719 755 aaKnown RBP12.15□□□□□ -0.46
LINC01539-201ENST00000587904 NUTM2GQ5VZR2 741 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
LINC01539-201ENST00000587904 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 BCL2L13Q9BXK5 485 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 STRCQ7RTU9 1775 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.46
LINC01539-201ENST00000587904 BBXQ8WY36 941 aaPredicted RBP12.15□□□□□ -0.46
LINC01539-201ENST00000587904 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 MSH6P52701 1360 aa12.15□□□□□ -0.46
LINC01539-201ENST00000587904 FOXO3O43524 673 aa12.14□□□□□ -0.47
LINC01539-201ENST00000587904 RGS3P49796 1198 aa12.14□□□□□ -0.47
LINC01539-201ENST00000587904 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
LINC01539-201ENST00000587904 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
LINC01539-201ENST00000587904 THUMPD2Q9BTF0 503 aaKnown RBP12.14□□□□□ -0.47
LINC01539-201ENST00000587904 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
LINC01539-201ENST00000587904 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
LINC01539-201ENST00000587904 ABCC6O95255 1503 aa12.13□□□□□ -0.47
LINC01539-201ENST00000587904 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
LINC01539-201ENST00000587904 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
LINC01539-201ENST00000587904 ARHGAP45Q92619 1136 aa12.13□□□□□ -0.47
LINC01539-201ENST00000587904 CRB1P82279 1406 aa12.13□□□□□ -0.47
LINC01539-201ENST00000587904 NCAPD2Q15021 1401 aa12.13□□□□□ -0.47
LINC01539-201ENST00000587904 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 CHL1O00533 1208 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 VAMP4O75379 141 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 RLBP1P12271 317 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
LINC01539-201ENST00000587904 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
LINC01539-201ENST00000587904 TRIM27P14373 513 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
LINC01539-201ENST00000587904 SMAP1Q8IYB5 467 aaPredicted RBP12.12□□□□□ -0.47
LINC01539-201ENST00000587904 MAP7D2Q96T17 732 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 NPHP3Q7Z494 1330 aa12.12□□□□□ -0.47
LINC01539-201ENST00000587904 GCP02774 474 aa12.11□□□□□ -0.47
LINC01539-201ENST00000587904 TWISTNBQ3B726 338 aaPredicted RBP12.11□□□□□ -0.47
LINC01539-201ENST00000587904 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
LINC01539-201ENST00000587904 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
LINC01539-201ENST00000587904 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
LINC01539-201ENST00000587904 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
LINC01539-201ENST00000587904 MED1Q15648 1581 aaPredicted RBP12.11□□□□□ -0.47
LINC01539-201ENST00000587904 PDE4AP27815 886 aa12.1□□□□□ -0.47
LINC01539-201ENST00000587904 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
LINC01539-201ENST00000587904 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
LINC01539-201ENST00000587904 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
LINC01539-201ENST00000587904 DCTN1Q14203 1278 aa12.1□□□□□ -0.47
LINC01539-201ENST00000587904 BABAM1Q9NWV8 329 aa12.1□□□□□ -0.47
LINC01539-201ENST00000587904 MCM10Q7L590 875 aa12.09□□□□□ -0.47
LINC01539-201ENST00000587904 MRPL50Q8N5N7 158 aaKnown RBP12.09□□□□□ -0.47
LINC01539-201ENST00000587904 PXDNQ92626 1479 aa12.09□□□□□ -0.47
LINC01539-201ENST00000587904 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
LINC01539-201ENST00000587904 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
LINC01539-201ENST00000587904 XPCQ01831 940 aaPredicted RBP12.08□□□□□ -0.48
LINC01539-201ENST00000587904 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
LINC01539-201ENST00000587904 TNNQ9UQP3 1299 aa12.08□□□□□ -0.48
LINC01539-201ENST00000587904 PLEKHG2Q9H7P9 1386 aa12.08□□□□□ -0.48
LINC01539-201ENST00000587904 FAM208AQ9UK61 1670 aaKnown RBP12.08□□□□□ -0.48
LINC01539-201ENST00000587904 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
LINC01539-201ENST00000587904 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
LINC01539-201ENST00000587904 LMO7Q8WWI1 1683 aa12.07□□□□□ -0.48
LINC01539-201ENST00000587904 CRYBG1Q9Y4K1 1723 aa12.07□□□□□ -0.48
LINC01539-201ENST00000587904 ITPRIPQ8IWB1 547 aa12.07□□□□□ -0.48
LINC01539-201ENST00000587904 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
LINC01539-201ENST00000587904 RWDD1Q9H446 243 aaPredicted RBP12.07□□□□□ -0.48
LINC01539-201ENST00000587904 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
LINC01539-201ENST00000587904 ABCC4O15439 1325 aa12.06□□□□□ -0.48
LINC01539-201ENST00000587904 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
LINC01539-201ENST00000587904 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
LINC01539-201ENST00000587904 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
LINC01539-201ENST00000587904 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms