RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 FLT4P35916 1363 aa24.69■■□□□ 1.54
MBD1-216ENST00000587605 TBC1D9Q6ZT07 1266 aa24.67■■□□□ 1.54
MBD1-216ENST00000587605 HSP90AB2PQ58FF8 381 aa24.67■■□□□ 1.54
MBD1-216ENST00000587605 KDRP35968 1356 aa24.67■■□□□ 1.54
MBD1-216ENST00000587605 ATP10DQ9P241 1426 aa24.66■■□□□ 1.54
MBD1-216ENST00000587605 DDIT3P35638 169 aa24.65■■□□□ 1.54
MBD1-216ENST00000587605 BRPF3Q9ULD4 1205 aa24.65■■□□□ 1.54
MBD1-216ENST00000587605 DDX11L8A8MPP1 907 aa24.65■■□□□ 1.54
MBD1-216ENST00000587605 ANKARQ7Z5J8 1434 aa24.64■■□□□ 1.54
MBD1-216ENST00000587605 MCM10Q7L590 875 aa24.64■■□□□ 1.53
MBD1-216ENST00000587605 MAP3K19Q56UN5 1328 aa24.63■■□□□ 1.53
MBD1-216ENST00000587605 HTATSF1O43719 755 aaKnown RBP24.63■■□□□ 1.53
MBD1-216ENST00000587605 PLEKHM2Q8IWE5 1019 aa24.63■■□□□ 1.53
MBD1-216ENST00000587605 RTF1Q92541 710 aaKnown RBP24.63■■□□□ 1.53
MBD1-216ENST00000587605 AMOTL2Q9Y2J4 779 aa24.63■■□□□ 1.53
MBD1-216ENST00000587605 GAS2L2Q8NHY3 880 aa24.63■■□□□ 1.53
MBD1-216ENST00000587605 USP54Q70EL1 1684 aa24.62■■□□□ 1.53
MBD1-216ENST00000587605 HSP90AB1P08238 724 aaKnown RBP24.62■■□□□ 1.53
MBD1-216ENST00000587605 SPRYD3Q8NCJ5 442 aa24.62■■□□□ 1.53
MBD1-216ENST00000587605 RTL1A6NKG5 1358 aa24.62■■□□□ 1.53
MBD1-216ENST00000587605 XRN1Q8IZH2 1706 aaKnown RBP24.61■■□□□ 1.53
MBD1-216ENST00000587605 IGSF1Q8N6C5 1336 aa24.61■■□□□ 1.53
MBD1-216ENST00000587605 PTMSP20962 102 aa24.61■■□□□ 1.53
MBD1-216ENST00000587605 TTC22Q5TAA0 569 aa24.61■■□□□ 1.53
MBD1-216ENST00000587605 CEP85Q6P2H3 762 aa24.61■■□□□ 1.53
MBD1-216ENST00000587605 KIF2CQ99661 725 aa24.61■■□□□ 1.53
MBD1-216ENST00000587605 SLC26A8Q96RN1 970 aa24.6■■□□□ 1.53
MBD1-216ENST00000587605 MSH6P52701 1360 aa24.6■■□□□ 1.53
MBD1-216ENST00000587605 LRRC37A3O60309 1634 aa24.6■■□□□ 1.53
MBD1-216ENST00000587605 SOS1Q07889 1333 aaPredicted RBP24.6■■□□□ 1.53
MBD1-216ENST00000587605 PIK3C2AO00443 1686 aa24.59■■□□□ 1.53
MBD1-216ENST00000587605 HMMRO75330 724 aa24.59■■□□□ 1.53
MBD1-216ENST00000587605 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
MBD1-216ENST00000587605 NGDNQ8NEJ9 315 aaKnown RBP24.59■■□□□ 1.53
MBD1-216ENST00000587605 NUTM2FA1L443 756 aa24.57■■□□□ 1.52
MBD1-216ENST00000587605 GSPT1P15170 499 aaKnown RBP24.57■■□□□ 1.52
MBD1-216ENST00000587605 THEMISQ8N1K5 641 aaPredicted RBP24.57■■□□□ 1.52
MBD1-216ENST00000587605 KRT24Q2M2I5 525 aa24.57■■□□□ 1.52
MBD1-216ENST00000587605 TSPYL4Q9UJ04 414 aa24.57■■□□□ 1.52
MBD1-216ENST00000587605 K7ELQ4 463 aaPredicted RBP24.56■■□□□ 1.52
MBD1-216ENST00000587605 AMPHP49418 695 aa24.56■■□□□ 1.52
MBD1-216ENST00000587605 MTHFSDQ2M296 383 aaKnown RBP24.56■■□□□ 1.52
MBD1-216ENST00000587605 CASC1Q6TDU7 716 aa24.56■■□□□ 1.52
MBD1-216ENST00000587605 FER1L4A9Z1Z3 1794 aa24.55■■□□□ 1.52
MBD1-216ENST00000587605 SLC4A2P04920 1241 aa24.55■■□□□ 1.52
MBD1-216ENST00000587605 GBP4Q96PP9 640 aa24.55■■□□□ 1.52
MBD1-216ENST00000587605 RGPD8O14715 1765 aaPredicted RBP24.54■■□□□ 1.52
MBD1-216ENST00000587605 TRAK2O60296 914 aa24.54■■□□□ 1.52
MBD1-216ENST00000587605 RABEP1Q15276 862 aa24.54■■□□□ 1.52
MBD1-216ENST00000587605 BABAM1Q9NWV8 329 aa24.54■■□□□ 1.52
MBD1-216ENST00000587605 ISY1Q9ULR0 285 aaKnown RBP24.53■■□□□ 1.52
MBD1-216ENST00000587605 CACNA1FO60840 1977 aa24.53■■□□□ 1.52
MBD1-216ENST00000587605 CEP170BQ9Y4F5 1589 aaPredicted RBP24.53■■□□□ 1.52
MBD1-216ENST00000587605 RAB3GAP1Q15042 981 aa24.53■■□□□ 1.52
MBD1-216ENST00000587605 FSD2A1L4K1 749 aa24.52■■□□□ 1.52
MBD1-216ENST00000587605 GOLGA6L3A6NEY3 463 aa24.52■■□□□ 1.52
MBD1-216ENST00000587605 EYA1Q99502 592 aa24.52■■□□□ 1.52
MBD1-216ENST00000587605 HSP90AA1P07900 732 aaKnown RBP24.51■■□□□ 1.51
MBD1-216ENST00000587605 MEIS3Q99687 375 aa24.51■■□□□ 1.51
MBD1-216ENST00000587605 STK31Q9BXU1 1019 aa24.51■■□□□ 1.51
MBD1-216ENST00000587605 FAM208AQ9UK61 1670 aaKnown RBP24.5■■□□□ 1.51
MBD1-216ENST00000587605 N4BP2Q86UW6 1770 aaPredicted RBP24.5■■□□□ 1.51
MBD1-216ENST00000587605 SOX12O15370 315 aa24.49■■□□□ 1.51
MBD1-216ENST00000587605 CEBPAP49715 358 aaPredicted RBP24.49■■□□□ 1.51
MBD1-216ENST00000587605 SKOR2Q2VWA4 1001 aaPredicted RBP24.49■■□□□ 1.51
MBD1-216ENST00000587605 FAM43AQ8N2R8 423 aa24.49■■□□□ 1.51
MBD1-216ENST00000587605 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
MBD1-216ENST00000587605 CCDC30Q5VVM6 783 aa24.48■■□□□ 1.51
MBD1-216ENST00000587605 TNPO1Q92973 898 aaKnown RBP24.48■■□□□ 1.51
MBD1-216ENST00000587605 OSBPL3Q9H4L5 887 aa24.48■■□□□ 1.51
MBD1-216ENST00000587605 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
MBD1-216ENST00000587605 FOXO3O43524 673 aa24.47■■□□□ 1.51
MBD1-216ENST00000587605 USP26Q9BXU7 913 aa24.47■■□□□ 1.51
MBD1-216ENST00000587605 PXDNLA1KZ92 1463 aa24.46■■□□□ 1.51
MBD1-216ENST00000587605 GNAI2P04899 355 aa24.46■■□□□ 1.51
MBD1-216ENST00000587605 NLRP6P59044 892 aa24.46■■□□□ 1.51
MBD1-216ENST00000587605 NWD1Q149M9 1564 aa24.46■■□□□ 1.51
MBD1-216ENST00000587605 REC8O95072 547 aa24.45■■□□□ 1.51
MBD1-216ENST00000587605 GNAI3P08754 354 aa24.45■■□□□ 1.51
MBD1-216ENST00000587605 RTN4Q9NQC3 1192 aaKnown RBP24.45■■□□□ 1.51
MBD1-216ENST00000587605 MAP3K5Q99683 1374 aa24.45■■□□□ 1.5
MBD1-216ENST00000587605 SDSP20132 328 aa24.45■■□□□ 1.5
MBD1-216ENST00000587605 HOXC9P31274 260 aa24.45■■□□□ 1.5
MBD1-216ENST00000587605 CLEC17AQ6ZS10 378 aa24.45■■□□□ 1.5
MBD1-216ENST00000587605 C16orf71Q8IYS4 520 aaPredicted RBP24.45■■□□□ 1.5
MBD1-216ENST00000587605 MIS18AQ9NYP9 233 aa24.44■■□□□ 1.5
MBD1-216ENST00000587605 CD2BP2O95400 341 aaKnown RBP24.43■■□□□ 1.5
MBD1-216ENST00000587605 G2E3Q7L622 706 aa24.43■■□□□ 1.5
MBD1-216ENST00000587605 MRE11P49959 708 aa24.41■■□□□ 1.5
MBD1-216ENST00000587605 SLC4A10Q6U841 1118 aa24.41■■□□□ 1.5
MBD1-216ENST00000587605 FLIIQ13045 1269 aa24.41■■□□□ 1.5
MBD1-216ENST00000587605 GOLGA6L22H0YM25 854 aa24.4■■□□□ 1.5
MBD1-216ENST00000587605 OTUD7AQ8TE49 926 aaPredicted RBP24.4■■□□□ 1.5
MBD1-216ENST00000587605 CHMP4AQ9BY43 222 aa24.4■■□□□ 1.5
MBD1-216ENST00000587605 SMARCA5O60264 1052 aaPredicted RBP24.39■■□□□ 1.5
MBD1-216ENST00000587605 PLPPR3Q6T4P5 718 aa24.39■■□□□ 1.5
MBD1-216ENST00000587605 RBM42Q9BTD8 480 aaKnown RBP24.39■■□□□ 1.5
MBD1-216ENST00000587605 ERC2O15083 957 aa24.39■■□□□ 1.49
MBD1-216ENST00000587605 TAF7Q15545 349 aaPredicted RBP24.39■■□□□ 1.49
MBD1-216ENST00000587605 F6X3S4 739 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 254.2 ms