RNA–Protein interactions for RNA: ENST00000587136.1

PTBP1-212, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-212ENST00000587136 NHSQ6T4R5 1651 aa28.61■■■□□ 2.17
PTBP1-212ENST00000587136 DDX54Q8TDD1 881 aaKnown RBP28.61■■■□□ 2.17
PTBP1-212ENST00000587136 PKD1L3Q7Z443 1732 aa28.6■■■□□ 2.17
PTBP1-212ENST00000587136 RGPD3A6NKT7 1758 aaPredicted RBP28.59■■■□□ 2.17
PTBP1-212ENST00000587136 RGPD4Q7Z3J3 1758 aa28.59■■■□□ 2.17
PTBP1-212ENST00000587136 BCL11BQ9C0K0 894 aaPredicted RBP28.58■■■□□ 2.17
PTBP1-212ENST00000587136 MTHFSP49914 203 aa28.57■■■□□ 2.16
PTBP1-212ENST00000587136 DOT1LQ8TEK3 1739 aa28.56■■■□□ 2.16
PTBP1-212ENST00000587136 RREB1Q92766 1687 aa28.56■■■□□ 2.16
PTBP1-212ENST00000587136 IGSF1Q8N6C5 1336 aa28.55■■■□□ 2.16
PTBP1-212ENST00000587136 BTAF1O14981 1849 aa28.55■■■□□ 2.16
PTBP1-212ENST00000587136 PARD3Q8TEW0 1356 aa28.54■■■□□ 2.16
PTBP1-212ENST00000587136 EZH2Q15910 746 aaKnown RBP28.54■■■□□ 2.16
PTBP1-212ENST00000587136 CAMKK2Q96RR4 588 aa28.54■■■□□ 2.16
PTBP1-212ENST00000587136 PTF1AQ7RTS3 328 aa28.53■■■□□ 2.16
PTBP1-212ENST00000587136 ACSBG1Q96GR2 724 aa28.53■■■□□ 2.16
PTBP1-212ENST00000587136 PCDH11XQ9BZA7 1347 aa28.52■■■□□ 2.16
PTBP1-212ENST00000587136 PCDH11YQ9BZA8 1340 aa28.52■■■□□ 2.16
PTBP1-212ENST00000587136 NUP188Q5SRE5 1749 aa28.51■■■□□ 2.15
PTBP1-212ENST00000587136 KCNQ2O43526 872 aa28.5■■■□□ 2.15
PTBP1-212ENST00000587136 PLSCR1O15162 318 aa28.49■■■□□ 2.15
PTBP1-212ENST00000587136 IL13P35225 146 aa28.49■■■□□ 2.15
PTBP1-212ENST00000587136 SPG7Q9UQ90 795 aa28.49■■■□□ 2.15
PTBP1-212ENST00000587136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.47■■■□□ 2.15
PTBP1-212ENST00000587136 PLEKHG2Q9H7P9 1386 aa28.47■■■□□ 2.15
PTBP1-212ENST00000587136 DIAPH1O60610 1272 aaKnown RBP28.45■■■□□ 2.14
PTBP1-212ENST00000587136 ITGB4P16144 1822 aa28.45■■■□□ 2.14
PTBP1-212ENST00000587136 CYP27B1O15528 508 aa28.44■■■□□ 2.14
PTBP1-212ENST00000587136 DDX10Q13206 875 aaKnown RBP28.44■■■□□ 2.14
PTBP1-212ENST00000587136 COL3A1P02461 1466 aaPredicted RBP28.43■■■□□ 2.14
PTBP1-212ENST00000587136 SULT6B1Q6IMI4 303 aa28.43■■■□□ 2.14
PTBP1-212ENST00000587136 AEBP1Q8IUX7 1158 aa28.42■■■□□ 2.14
PTBP1-212ENST00000587136 SYTL4Q96C24 671 aaPredicted RBP28.42■■■□□ 2.14
PTBP1-212ENST00000587136 TOGARAM1Q9Y4F4 1720 aa28.42■■■□□ 2.14
PTBP1-212ENST00000587136 KDRP35968 1356 aa28.41■■■□□ 2.14
PTBP1-212ENST00000587136 PPP2R1AP30153 589 aa28.41■■■□□ 2.14
PTBP1-212ENST00000587136 PRIM1P49642 420 aaKnown RBP28.41■■■□□ 2.14
PTBP1-212ENST00000587136 CFAP53Q96M91 514 aa28.4■■■□□ 2.14
PTBP1-212ENST00000587136 PLEKHO1Q53GL0 409 aaPredicted RBP28.39■■■□□ 2.14
PTBP1-212ENST00000587136 IFNL2Q8IZJ0 200 aa28.38■■■□□ 2.13
PTBP1-212ENST00000587136 NKX1-1Q15270 411 aaPredicted RBP28.37■■■□□ 2.13
PTBP1-212ENST00000587136 AMOTQ4VCS5 1084 aa28.37■■■□□ 2.13
PTBP1-212ENST00000587136 PHKG2P15735 406 aa28.36■■■□□ 2.13
PTBP1-212ENST00000587136 NBPF14Q5TI25 921 aa28.36■■■□□ 2.13
PTBP1-212ENST00000587136 LY75O60449 1722 aa28.35■■■□□ 2.13
PTBP1-212ENST00000587136 TXNRD1Q16881 649 aa28.35■■■□□ 2.13
PTBP1-212ENST00000587136 HMOX1P09601 288 aa28.34■■■□□ 2.13
PTBP1-212ENST00000587136 PROM2Q8N271 834 aa28.34■■■□□ 2.13
PTBP1-212ENST00000587136 PSDA5PKW4 1024 aaPredicted RBP28.33■■■□□ 2.13
PTBP1-212ENST00000587136 U2SURPO15042 1029 aaKnown RBP28.33■■■□□ 2.13
PTBP1-212ENST00000587136 VIRMAQ69YN4 1812 aaKnown RBP28.33■■■□□ 2.13
PTBP1-212ENST00000587136 ZNF530Q6P9A1 599 aaPredicted RBP28.32■■■□□ 2.12
PTBP1-212ENST00000587136 R3HDM1Q15032 1099 aaKnown RBP28.3■■■□□ 2.12
PTBP1-212ENST00000587136 HSP90AB1P08238 724 aaKnown RBP28.29■■■□□ 2.12
PTBP1-212ENST00000587136 MPRIPQ6WCQ1 1025 aa28.29■■■□□ 2.12
PTBP1-212ENST00000587136 NUDCQ9Y266 331 aa28.29■■■□□ 2.12
PTBP1-212ENST00000587136 RALBP1Q15311 655 aa28.28■■■□□ 2.12
PTBP1-212ENST00000587136 C1orf141Q5JVX7 400 aa28.28■■■□□ 2.12
PTBP1-212ENST00000587136 SCN11AQ9UI33 1791 aa28.28■■■□□ 2.12
PTBP1-212ENST00000587136 DCAF5Q96JK2 942 aa28.25■■■□□ 2.11
PTBP1-212ENST00000587136 PAPPAQ13219 1627 aa28.25■■■□□ 2.11
PTBP1-212ENST00000587136 ZNF316A6NFI3 1004 aaPredicted RBP28.24■■■□□ 2.11
PTBP1-212ENST00000587136 SLC27A3Q5K4L6 730 aa28.24■■■□□ 2.11
PTBP1-212ENST00000587136 PIGBQ92521 554 aa28.23■■■□□ 2.11
PTBP1-212ENST00000587136 ANO8Q9HCE9 1232 aaPredicted RBP28.23■■■□□ 2.11
PTBP1-212ENST00000587136 TMOD3Q9NYL9 352 aa28.23■■■□□ 2.11
PTBP1-212ENST00000587136 STK32BQ9NY57 414 aa28.22■■■□□ 2.11
PTBP1-212ENST00000587136 KDM6AO15550 1401 aaPredicted RBP28.21■■■□□ 2.11
PTBP1-212ENST00000587136 TAF1LQ8IZX4 1826 aa28.21■■■□□ 2.11
PTBP1-212ENST00000587136 AKAP4Q5JQC9 854 aa28.21■■■□□ 2.11
PTBP1-212ENST00000587136 LRRC4BQ9NT99 713 aa28.21■■■□□ 2.11
PTBP1-212ENST00000587136 ERVV-2B6SEH9 535 aa28.2■■■□□ 2.1
PTBP1-212ENST00000587136 U2AF1L5P0DN76 240 aaPredicted RBP28.2■■■□□ 2.1
PTBP1-212ENST00000587136 U2AF1Q01081 240 aaKnown RBP eCLIP28.2■■■□□ 2.1
PTBP1-212ENST00000587136 SMARCC1Q92922 1105 aaPredicted RBP28.2■■■□□ 2.1
PTBP1-212ENST00000587136 PALLDQ8WX93 1383 aa28.2■■■□□ 2.1
PTBP1-212ENST00000587136 MTHFSDQ2M296 383 aaKnown RBP28.18■■■□□ 2.1
PTBP1-212ENST00000587136 CCNL1Q9UK58 526 aaPredicted RBP28.18■■■□□ 2.1
PTBP1-212ENST00000587136 C5P01031 1676 aa28.18■■■□□ 2.1
PTBP1-212ENST00000587136 SLC15A2Q16348 729 aa28.17■■■□□ 2.1
PTBP1-212ENST00000587136 MYBBP1AQ9BQG0 1328 aaKnown RBP28.17■■■□□ 2.1
PTBP1-212ENST00000587136 QSER1Q2KHR3 1735 aa28.16■■■□□ 2.1
PTBP1-212ENST00000587136 PRKAR2BP31323 418 aa28.16■■■□□ 2.1
PTBP1-212ENST00000587136 RSPH6AQ9H0K4 717 aa28.16■■■□□ 2.1
PTBP1-212ENST00000587136 LRP5O75197 1615 aa28.15■■■□□ 2.1
PTBP1-212ENST00000587136 CASZ1Q86V15 1759 aa28.15■■■□□ 2.1
PTBP1-212ENST00000587136 KCNQ4P56696 695 aa28.15■■■□□ 2.1
PTBP1-212ENST00000587136 CABP4P57796 275 aa28.15■■■□□ 2.1
PTBP1-212ENST00000587136 ADAMTS7Q9UKP4 1686 aa28.15■■■□□ 2.1
PTBP1-212ENST00000587136 TUBGCP6Q96RT7 1819 aa28.14■■■□□ 2.1
PTBP1-212ENST00000587136 FCHSD2O94868 740 aa28.14■■■□□ 2.1
PTBP1-212ENST00000587136 GAS2L2Q8NHY3 880 aa28.14■■■□□ 2.1
PTBP1-212ENST00000587136 ASAP1Q9ULH1 1129 aa28.12■■■□□ 2.09
PTBP1-212ENST00000587136 HMGB2P26583 209 aaKnown RBP28.11■■■□□ 2.09
PTBP1-212ENST00000587136 PRKRIP1Q9H875 184 aaPredicted RBP28.11■■■□□ 2.09
PTBP1-212ENST00000587136 ATG3Q9NT62 314 aa28.1■■■□□ 2.09
PTBP1-212ENST00000587136 RNMTO43148 476 aaKnown RBP28.09■■■□□ 2.09
PTBP1-212ENST00000587136 ZNF827Q17R98 1081 aa28.09■■■□□ 2.09
PTBP1-212ENST00000587136 NFATC2IPQ8NCF5 419 aa28.09■■■□□ 2.09
PTBP1-212ENST00000587136 AKT1S1Q96B36 256 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms