RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 RGPD4Q7Z3J3 1758 aa18.07■□□□□ 0.48
SMARCA4-210ENST00000586892 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
SMARCA4-210ENST00000586892 DDX54Q8TDD1 881 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-210ENST00000586892 EYA1Q99502 592 aa18.06■□□□□ 0.48
SMARCA4-210ENST00000586892 KAT6BQ8WYB5 2073 aa18.06■□□□□ 0.48
SMARCA4-210ENST00000586892 CAMKK2Q96RR4 588 aa18.05■□□□□ 0.48
SMARCA4-210ENST00000586892 PKD1L3Q7Z443 1732 aa18.04■□□□□ 0.48
SMARCA4-210ENST00000586892 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
SMARCA4-210ENST00000586892 IGSF1Q8N6C5 1336 aa18.03■□□□□ 0.48
SMARCA4-210ENST00000586892 RREB1Q92766 1687 aa18.03■□□□□ 0.48
SMARCA4-210ENST00000586892 MTHFSP49914 203 aa18.03■□□□□ 0.48
SMARCA4-210ENST00000586892 EZH2Q15910 746 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-210ENST00000586892 PCDH11XQ9BZA7 1347 aa18.02■□□□□ 0.48
SMARCA4-210ENST00000586892 PCDH11YQ9BZA8 1340 aa18.02■□□□□ 0.48
SMARCA4-210ENST00000586892 PLSCR1O15162 318 aa18.02■□□□□ 0.48
SMARCA4-210ENST00000586892 PTF1AQ7RTS3 328 aa18.01■□□□□ 0.47
SMARCA4-210ENST00000586892 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
SMARCA4-210ENST00000586892 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
SMARCA4-210ENST00000586892 KCNQ2O43526 872 aa18■□□□□ 0.47
SMARCA4-210ENST00000586892 CNGB1Q14028 1251 aaPredicted RBP18■□□□□ 0.47
SMARCA4-210ENST00000586892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18■□□□□ 0.47
SMARCA4-210ENST00000586892 BTAF1O14981 1849 aa18■□□□□ 0.47
SMARCA4-210ENST00000586892 SRCAPQ6ZRS2 3230 aa18■□□□□ 0.47
SMARCA4-210ENST00000586892 NUP188Q5SRE5 1749 aa17.99■□□□□ 0.47
SMARCA4-210ENST00000586892 SPG7Q9UQ90 795 aa17.99■□□□□ 0.47
SMARCA4-210ENST00000586892 IL13P35225 146 aa17.98■□□□□ 0.47
SMARCA4-210ENST00000586892 KDRP35968 1356 aa17.96■□□□□ 0.47
SMARCA4-210ENST00000586892 CYP27B1O15528 508 aa17.96■□□□□ 0.47
SMARCA4-210ENST00000586892 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
SMARCA4-210ENST00000586892 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
SMARCA4-210ENST00000586892 PRIM1P49642 420 aaKnown RBP17.94■□□□□ 0.46
SMARCA4-210ENST00000586892 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
SMARCA4-210ENST00000586892 SYTL4Q96C24 671 aaPredicted RBP17.94■□□□□ 0.46
SMARCA4-210ENST00000586892 NKX1-1Q15270 411 aaPredicted RBP17.93■□□□□ 0.46
SMARCA4-210ENST00000586892 AEBP1Q8IUX7 1158 aa17.93■□□□□ 0.46
SMARCA4-210ENST00000586892 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
SMARCA4-210ENST00000586892 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
SMARCA4-210ENST00000586892 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-210ENST00000586892 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
SMARCA4-210ENST00000586892 IFNL2Q8IZJ0 200 aa17.92■□□□□ 0.46
SMARCA4-210ENST00000586892 ITGB4P16144 1822 aa17.91■□□□□ 0.46
SMARCA4-210ENST00000586892 PHKG2P15735 406 aa17.91■□□□□ 0.46
SMARCA4-210ENST00000586892 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
SMARCA4-210ENST00000586892 DDX10Q13206 875 aaKnown RBP17.91■□□□□ 0.46
SMARCA4-210ENST00000586892 TXNRD1Q16881 649 aa17.91■□□□□ 0.46
SMARCA4-210ENST00000586892 PROM2Q8N271 834 aa17.91■□□□□ 0.46
SMARCA4-210ENST00000586892 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
SMARCA4-210ENST00000586892 PSDA5PKW4 1024 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-210ENST00000586892 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-210ENST00000586892 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-210ENST00000586892 LY75O60449 1722 aa17.88■□□□□ 0.45
SMARCA4-210ENST00000586892 HMOX1P09601 288 aa17.87■□□□□ 0.45
SMARCA4-210ENST00000586892 SLC27A3Q5K4L6 730 aa17.87■□□□□ 0.45
SMARCA4-210ENST00000586892 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
SMARCA4-210ENST00000586892 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-210ENST00000586892 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
SMARCA4-210ENST00000586892 PAPPAQ13219 1627 aa17.85■□□□□ 0.45
SMARCA4-210ENST00000586892 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
SMARCA4-210ENST00000586892 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
SMARCA4-210ENST00000586892 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
SMARCA4-210ENST00000586892 RALBP1Q15311 655 aa17.84■□□□□ 0.45
SMARCA4-210ENST00000586892 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-210ENST00000586892 TMOD3Q9NYL9 352 aa17.84■□□□□ 0.45
SMARCA4-210ENST00000586892 PIGBQ92521 554 aa17.83■□□□□ 0.44
SMARCA4-210ENST00000586892 ERVV-2B6SEH9 535 aa17.82■□□□□ 0.44
SMARCA4-210ENST00000586892 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
SMARCA4-210ENST00000586892 LRRC4BQ9NT99 713 aa17.82■□□□□ 0.44
SMARCA4-210ENST00000586892 STK32BQ9NY57 414 aa17.82■□□□□ 0.44
SMARCA4-210ENST00000586892 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-210ENST00000586892 PALLDQ8WX93 1383 aa17.81■□□□□ 0.44
SMARCA4-210ENST00000586892 LRP5O75197 1615 aa17.81■□□□□ 0.44
SMARCA4-210ENST00000586892 SLC15A2Q16348 729 aa17.81■□□□□ 0.44
SMARCA4-210ENST00000586892 AKAP4Q5JQC9 854 aa17.81■□□□□ 0.44
SMARCA4-210ENST00000586892 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
SMARCA4-210ENST00000586892 HMGB2P26583 209 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-210ENST00000586892 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
SMARCA4-210ENST00000586892 VIRMAQ69YN4 1812 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-210ENST00000586892 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
SMARCA4-210ENST00000586892 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMARCA4-210ENST00000586892 MTHFSDQ2M296 383 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-210ENST00000586892 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
SMARCA4-210ENST00000586892 CASZ1Q86V15 1759 aa17.78■□□□□ 0.44
SMARCA4-210ENST00000586892 C5P01031 1676 aa17.77■□□□□ 0.44
SMARCA4-210ENST00000586892 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.44
SMARCA4-210ENST00000586892 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
SMARCA4-210ENST00000586892 CABP4P57796 275 aa17.77■□□□□ 0.44
SMARCA4-210ENST00000586892 GAS2L2Q8NHY3 880 aa17.77■□□□□ 0.44
SMARCA4-210ENST00000586892 QSER1Q2KHR3 1735 aa17.77■□□□□ 0.44
SMARCA4-210ENST00000586892 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-210ENST00000586892 FCHSD2O94868 740 aa17.76■□□□□ 0.43
SMARCA4-210ENST00000586892 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
SMARCA4-210ENST00000586892 KCNQ4P56696 695 aa17.76■□□□□ 0.43
SMARCA4-210ENST00000586892 AKT1S1Q96B36 256 aa17.76■□□□□ 0.43
SMARCA4-210ENST00000586892 ASAP1Q9ULH1 1129 aa17.76■□□□□ 0.43
SMARCA4-210ENST00000586892 ADAMTS7Q9UKP4 1686 aa17.76■□□□□ 0.43
SMARCA4-210ENST00000586892 ZNF827Q17R98 1081 aa17.75■□□□□ 0.43
SMARCA4-210ENST00000586892 ATG3Q9NT62 314 aa17.75■□□□□ 0.43
SMARCA4-210ENST00000586892 MRC1P22897 1456 aa17.75■□□□□ 0.43
SMARCA4-210ENST00000586892 ZNF831Q5JPB2 1677 aa17.74■□□□□ 0.43
SMARCA4-210ENST00000586892 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms