RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 TOGARAM1Q9Y4F4 1720 aa15.71■□□□□ 0.1
LRFN3-202ENST00000585876 VIRMAQ69YN4 1812 aaKnown RBP15.71■□□□□ 0.1
LRFN3-202ENST00000585876 EXOC5O00471 708 aa15.7■□□□□ 0.1
LRFN3-202ENST00000585876 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
LRFN3-202ENST00000585876 MARCH10Q8NA82 808 aaPredicted RBP15.7■□□□□ 0.1
LRFN3-202ENST00000585876 RAPGEF4Q8WZA2 1011 aa15.7■□□□□ 0.1
LRFN3-202ENST00000585876 RREB1Q92766 1687 aa15.7■□□□□ 0.1
LRFN3-202ENST00000585876 BTAF1O14981 1849 aa15.69■□□□□ 0.1
LRFN3-202ENST00000585876 RALBP1Q15311 655 aa15.69■□□□□ 0.1
LRFN3-202ENST00000585876 ITGB4P16144 1822 aa15.68■□□□□ 0.1
LRFN3-202ENST00000585876 FAM182BQ5T319 152 aa15.68■□□□□ 0.1
LRFN3-202ENST00000585876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.68■□□□□ 0.1
LRFN3-202ENST00000585876 TATP17735 454 aaPredicted RBP15.67■□□□□ 0.1
LRFN3-202ENST00000585876 KAT6BQ8WYB5 2073 aa15.67■□□□□ 0.1
LRFN3-202ENST00000585876 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
LRFN3-202ENST00000585876 ZCRB1Q8TBF4 217 aaKnown RBP15.66■□□□□ 0.1
LRFN3-202ENST00000585876 ADAMTS7Q9UKP4 1686 aa15.66■□□□□ 0.1
LRFN3-202ENST00000585876 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
LRFN3-202ENST00000585876 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
LRFN3-202ENST00000585876 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
LRFN3-202ENST00000585876 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
LRFN3-202ENST00000585876 CFAP53Q96M91 514 aa15.65■□□□□ 0.1
LRFN3-202ENST00000585876 NUP188Q5SRE5 1749 aa15.64■□□□□ 0.09
LRFN3-202ENST00000585876 LY75O60449 1722 aa15.63■□□□□ 0.09
LRFN3-202ENST00000585876 AEBP1Q8IUX7 1158 aa15.63■□□□□ 0.09
LRFN3-202ENST00000585876 MYBBP1AQ9BQG0 1328 aaKnown RBP15.63■□□□□ 0.09
LRFN3-202ENST00000585876 SULT6B1Q6IMI4 303 aa15.62■□□□□ 0.09
LRFN3-202ENST00000585876 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
LRFN3-202ENST00000585876 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
LRFN3-202ENST00000585876 CYP27B1O15528 508 aa15.61■□□□□ 0.09
LRFN3-202ENST00000585876 BCL11BQ9C0K0 894 aaPredicted RBP15.61■□□□□ 0.09
LRFN3-202ENST00000585876 TRIM37O94972 964 aa15.6■□□□□ 0.09
LRFN3-202ENST00000585876 NKX1-1Q15270 411 aaPredicted RBP15.6■□□□□ 0.09
LRFN3-202ENST00000585876 SF3B2Q13435 895 aaKnown RBP15.59■□□□□ 0.09
LRFN3-202ENST00000585876 AMOTQ4VCS5 1084 aa15.59■□□□□ 0.09
LRFN3-202ENST00000585876 DDX54Q8TDD1 881 aaKnown RBP15.59■□□□□ 0.09
LRFN3-202ENST00000585876 DLG5Q8TDM6 1919 aa15.58■□□□□ 0.09
LRFN3-202ENST00000585876 BAG6P46379 1132 aa15.58■□□□□ 0.08
LRFN3-202ENST00000585876 NUDCQ9Y266 331 aa15.58■□□□□ 0.08
LRFN3-202ENST00000585876 MRC1P22897 1456 aa15.58■□□□□ 0.08
LRFN3-202ENST00000585876 SIPA1L3O60292 1781 aaPredicted RBP15.57■□□□□ 0.08
LRFN3-202ENST00000585876 PHKG2P15735 406 aa15.57■□□□□ 0.08
LRFN3-202ENST00000585876 PLEKHO1Q53GL0 409 aaPredicted RBP15.57■□□□□ 0.08
LRFN3-202ENST00000585876 KDM6AO15550 1401 aaPredicted RBP15.57■□□□□ 0.08
LRFN3-202ENST00000585876 PAPPAQ13219 1627 aa15.57■□□□□ 0.08
LRFN3-202ENST00000585876 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
LRFN3-202ENST00000585876 HMOX1P09601 288 aa15.56■□□□□ 0.08
LRFN3-202ENST00000585876 PTF1AQ7RTS3 328 aa15.56■□□□□ 0.08
LRFN3-202ENST00000585876 IFNL2Q8IZJ0 200 aa15.56■□□□□ 0.08
LRFN3-202ENST00000585876 RSPH6AQ9H0K4 717 aa15.56■□□□□ 0.08
LRFN3-202ENST00000585876 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
LRFN3-202ENST00000585876 U2SURPO15042 1029 aaKnown RBP15.55■□□□□ 0.08
LRFN3-202ENST00000585876 PLSCR1O15162 318 aa15.55■□□□□ 0.08
LRFN3-202ENST00000585876 DEFB132Q7Z7B7 95 aa15.55■□□□□ 0.08
LRFN3-202ENST00000585876 CICQ96RK0 1608 aaPredicted RBP15.54■□□□□ 0.08
LRFN3-202ENST00000585876 KCNQ2O43526 872 aa15.54■□□□□ 0.08
LRFN3-202ENST00000585876 FCHSD2O94868 740 aa15.54■□□□□ 0.08
LRFN3-202ENST00000585876 APBA3O96018 575 aa15.54■□□□□ 0.08
LRFN3-202ENST00000585876 CAMKK2Q96RR4 588 aa15.54■□□□□ 0.08
LRFN3-202ENST00000585876 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
LRFN3-202ENST00000585876 ZNF530Q6P9A1 599 aaPredicted RBP15.53■□□□□ 0.08
LRFN3-202ENST00000585876 QSER1Q2KHR3 1735 aa15.53■□□□□ 0.08
LRFN3-202ENST00000585876 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.08
LRFN3-202ENST00000585876 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.08
LRFN3-202ENST00000585876 ACSBG1Q96GR2 724 aa15.52■□□□□ 0.08
LRFN3-202ENST00000585876 DCAF5Q96JK2 942 aa15.52■□□□□ 0.08
LRFN3-202ENST00000585876 UBR2Q8IWV8 1755 aa15.52■□□□□ 0.07
LRFN3-202ENST00000585876 C5P01031 1676 aa15.51■□□□□ 0.07
LRFN3-202ENST00000585876 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
LRFN3-202ENST00000585876 PRIM1P49642 420 aaKnown RBP15.51■□□□□ 0.07
LRFN3-202ENST00000585876 EN1Q05925 392 aaPredicted RBP15.51■□□□□ 0.07
LRFN3-202ENST00000585876 AKAP4Q5JQC9 854 aa15.51■□□□□ 0.07
LRFN3-202ENST00000585876 ERVV-2B6SEH9 535 aa15.5■□□□□ 0.07
LRFN3-202ENST00000585876 MTHFSDQ2M296 383 aaKnown RBP15.5■□□□□ 0.07
LRFN3-202ENST00000585876 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
LRFN3-202ENST00000585876 MAP3K5Q99683 1374 aa15.49■□□□□ 0.07
LRFN3-202ENST00000585876 EZH2Q15910 746 aaKnown RBP15.49■□□□□ 0.07
LRFN3-202ENST00000585876 GAS2L2Q8NHY3 880 aa15.49■□□□□ 0.07
LRFN3-202ENST00000585876 TUBGCP6Q96RT7 1819 aa15.49■□□□□ 0.07
LRFN3-202ENST00000585876 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
LRFN3-202ENST00000585876 ANP32CO43423 234 aa15.48■□□□□ 0.07
LRFN3-202ENST00000585876 PHACTR3Q96KR7 559 aa15.48■□□□□ 0.07
LRFN3-202ENST00000585876 SRCAPQ6ZRS2 3230 aa15.48■□□□□ 0.07
LRFN3-202ENST00000585876 SYTL4Q96C24 671 aaPredicted RBP15.47■□□□□ 0.07
LRFN3-202ENST00000585876 PLEKHF1Q96S99 279 aa15.47■□□□□ 0.07
LRFN3-202ENST00000585876 CEMIPQ8WUJ3 1361 aa15.47■□□□□ 0.07
LRFN3-202ENST00000585876 PROM2Q8N271 834 aa15.46■□□□□ 0.07
LRFN3-202ENST00000585876 CASZ1Q86V15 1759 aa15.46■□□□□ 0.07
LRFN3-202ENST00000585876 TXNRD1Q16881 649 aa15.45■□□□□ 0.06
LRFN3-202ENST00000585876 PIGBQ92521 554 aa15.45■□□□□ 0.06
LRFN3-202ENST00000585876 PNNQ9H307 717 aaKnown RBP15.45■□□□□ 0.06
LRFN3-202ENST00000585876 TMOD3Q9NYL9 352 aa15.45■□□□□ 0.06
LRFN3-202ENST00000585876 PALLDQ8WX93 1383 aa15.45■□□□□ 0.06
LRFN3-202ENST00000585876 TJP1Q07157 1748 aa15.45■□□□□ 0.06
LRFN3-202ENST00000585876 C4BP0C0L5 1744 aa15.44■□□□□ 0.06
LRFN3-202ENST00000585876 GNAT3A8MTJ3 354 aa15.44■□□□□ 0.06
LRFN3-202ENST00000585876 SLC27A3Q5K4L6 730 aa15.44■□□□□ 0.06
LRFN3-202ENST00000585876 MPRIPQ6WCQ1 1025 aa15.44■□□□□ 0.06
LRFN3-202ENST00000585876 KDM3BQ7LBC6 1761 aa15.44■□□□□ 0.06
LRFN3-202ENST00000585876 RNMTO43148 476 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms