RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 CUL4AQ13619 759 aa17.9■□□□□ 0.46
MBD1-212ENST00000585672 CREBRFQ8IUR6 639 aa17.9■□□□□ 0.46
MBD1-212ENST00000585672 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
MBD1-212ENST00000585672 EFCC1Q9HA90 598 aa17.89■□□□□ 0.45
MBD1-212ENST00000585672 UHRF1BP1LA0JNW5 1464 aa17.89■□□□□ 0.45
MBD1-212ENST00000585672 LRMPQ12912 555 aa17.89■□□□□ 0.45
MBD1-212ENST00000585672 FBXO38Q6PIJ6 1188 aa17.89■□□□□ 0.45
MBD1-212ENST00000585672 KIF1BPQ96EK5 621 aa17.89■□□□□ 0.45
MBD1-212ENST00000585672 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
MBD1-212ENST00000585672 ADGRB2O60241 1585 aa17.88■□□□□ 0.45
MBD1-212ENST00000585672 GIMAP6Q6P9H5 292 aa17.88■□□□□ 0.45
MBD1-212ENST00000585672 NOL10Q9BSC4 688 aaKnown RBP17.88■□□□□ 0.45
MBD1-212ENST00000585672 YY1AP1Q9H869 796 aa17.88■□□□□ 0.45
MBD1-212ENST00000585672 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
MBD1-212ENST00000585672 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
MBD1-212ENST00000585672 SDSP20132 328 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 TMEM87AQ8NBN3 555 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 CFAP53Q96M91 514 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.87■□□□□ 0.45
MBD1-212ENST00000585672 V9GYY5 206 aaPredicted RBP17.87■□□□□ 0.45
MBD1-212ENST00000585672 NSD3Q9BZ95 1437 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 UNC13BO14795 1591 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 ZNF446Q9NWS9 450 aa17.87■□□□□ 0.45
MBD1-212ENST00000585672 RSPH14Q9UHP6 348 aa17.86■□□□□ 0.45
MBD1-212ENST00000585672 PPRC1Q5VV67 1664 aaKnown RBP17.86■□□□□ 0.45
MBD1-212ENST00000585672 SOX12O15370 315 aa17.86■□□□□ 0.45
MBD1-212ENST00000585672 TNNT3P45378 269 aaPredicted RBP17.86■□□□□ 0.45
MBD1-212ENST00000585672 ALDH1L2Q3SY69 923 aa17.86■□□□□ 0.45
MBD1-212ENST00000585672 CCDC186Q7Z3E2 898 aa17.86■□□□□ 0.45
MBD1-212ENST00000585672 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
MBD1-212ENST00000585672 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.86■□□□□ 0.45
MBD1-212ENST00000585672 ZNF215Q9UL58 517 aaPredicted RBP17.86■□□□□ 0.45
MBD1-212ENST00000585672 ADGRL1O94910 1474 aa17.85■□□□□ 0.45
MBD1-212ENST00000585672 TMPOP42166 694 aaKnown RBP17.85■□□□□ 0.45
MBD1-212ENST00000585672 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
MBD1-212ENST00000585672 GEMIN8Q9NWZ8 242 aaKnown RBP17.85■□□□□ 0.45
MBD1-212ENST00000585672 CNPY2Q9Y2B0 182 aa17.85■□□□□ 0.45
MBD1-212ENST00000585672 ARHGEF5Q12774 1597 aa17.85■□□□□ 0.45
MBD1-212ENST00000585672 REC8O95072 547 aa17.84■□□□□ 0.45
MBD1-212ENST00000585672 NOL8Q76FK4 1167 aaKnown RBP17.84■□□□□ 0.45
MBD1-212ENST00000585672 NOP2P46087 812 aaKnown RBP17.84■□□□□ 0.45
MBD1-212ENST00000585672 MMP14P50281 582 aa17.84■□□□□ 0.45
MBD1-212ENST00000585672 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
MBD1-212ENST00000585672 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
MBD1-212ENST00000585672 RTF1Q92541 710 aaKnown RBP17.84■□□□□ 0.45
MBD1-212ENST00000585672 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
MBD1-212ENST00000585672 ZNF592Q92610 1267 aa17.83■□□□□ 0.45
MBD1-212ENST00000585672 SRPK2P78362 688 aaKnown RBP17.83■□□□□ 0.44
MBD1-212ENST00000585672 KLHL34Q8N239 644 aa17.83■□□□□ 0.44
MBD1-212ENST00000585672 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.44
MBD1-212ENST00000585672 NRBP1Q9UHY1 535 aa17.83■□□□□ 0.44
MBD1-212ENST00000585672 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.44
MBD1-212ENST00000585672 MCM2P49736 904 aa17.82■□□□□ 0.44
MBD1-212ENST00000585672 ELF2Q15723 593 aa17.82■□□□□ 0.44
MBD1-212ENST00000585672 TPD52L1Q16890 204 aaPredicted RBP17.82■□□□□ 0.44
MBD1-212ENST00000585672 CEP135Q66GS9 1140 aa17.82■□□□□ 0.44
MBD1-212ENST00000585672 PLEKHF1Q96S99 279 aa17.82■□□□□ 0.44
MBD1-212ENST00000585672 IL16Q14005 1332 aa17.82■□□□□ 0.44
MBD1-212ENST00000585672 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
MBD1-212ENST00000585672 UBE2HP62256 183 aa17.82■□□□□ 0.44
MBD1-212ENST00000585672 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
MBD1-212ENST00000585672 IQGAP3Q86VI3 1631 aa17.82■□□□□ 0.44
MBD1-212ENST00000585672 ERC2O15083 957 aa17.81■□□□□ 0.44
MBD1-212ENST00000585672 ZSCAN25Q6NSZ9 544 aa17.81■□□□□ 0.44
MBD1-212ENST00000585672 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.81■□□□□ 0.44
MBD1-212ENST00000585672 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
MBD1-212ENST00000585672 FBLN2P98095 1184 aa17.81■□□□□ 0.44
MBD1-212ENST00000585672 MLECQ14165 292 aa17.81■□□□□ 0.44
MBD1-212ENST00000585672 SLFNL1Q499Z3 407 aa17.81■□□□□ 0.44
MBD1-212ENST00000585672 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
MBD1-212ENST00000585672 RASSF4Q9H2L5 321 aa17.8■□□□□ 0.44
MBD1-212ENST00000585672 DUOX2Q9NRD8 1548 aa17.8■□□□□ 0.44
MBD1-212ENST00000585672 PIK3R4Q99570 1358 aa17.8■□□□□ 0.44
MBD1-212ENST00000585672 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
MBD1-212ENST00000585672 ERBB3P21860 1342 aa17.8■□□□□ 0.44
MBD1-212ENST00000585672 DHX16O60231 1041 aaKnown RBP17.79■□□□□ 0.44
MBD1-212ENST00000585672 PSEN1P49768 467 aa17.79■□□□□ 0.44
MBD1-212ENST00000585672 TMX1Q9H3N1 280 aa17.79■□□□□ 0.44
MBD1-212ENST00000585672 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
MBD1-212ENST00000585672 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
MBD1-212ENST00000585672 LOC102724159A0A0B4J2E5 919 aa17.78■□□□□ 0.44
MBD1-212ENST00000585672 BMS1Q14692 1282 aaKnown RBP17.78■□□□□ 0.44
MBD1-212ENST00000585672 PWP2Q15269 919 aaKnown RBP17.78■□□□□ 0.44
MBD1-212ENST00000585672 NEK11Q8NG66 645 aa17.78■□□□□ 0.44
MBD1-212ENST00000585672 SYT10Q6XYQ8 523 aa17.78■□□□□ 0.44
MBD1-212ENST00000585672 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
MBD1-212ENST00000585672 FHOD1Q9Y613 1164 aa17.78■□□□□ 0.44
MBD1-212ENST00000585672 PLEKHD1A6NEE1 506 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 SLC12A5Q9H2X9 1139 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 RTL1A6NKG5 1358 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 PTPRTO14522 1441 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 MUM1L1Q5H9M0 696 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 ATAD2Q6PL18 1390 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 DRC7Q8IY82 874 aa17.77■□□□□ 0.44
MBD1-212ENST00000585672 MRPL50Q8N5N7 158 aaKnown RBP17.77■□□□□ 0.44
MBD1-212ENST00000585672 TRIM66O15016 1216 aa17.76■□□□□ 0.43
MBD1-212ENST00000585672 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms