RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 NUP155O75694 1391 aa8.43□□□□□ -1.06
CDH8-213ENST00000584966 MYO5BQ9ULV0 1848 aa8.43□□□□□ -1.06
CDH8-213ENST00000584966 NPATQ14207 1427 aa8.42□□□□□ -1.06
CDH8-213ENST00000584966 SYNMO15061 1565 aa8.42□□□□□ -1.06
CDH8-213ENST00000584966 SPHKAPQ2M3C7 1700 aa8.42□□□□□ -1.06
CDH8-213ENST00000584966 MYO3AQ8NEV4 1616 aa8.41□□□□□ -1.06
CDH8-213ENST00000584966 KANK1Q14678 1352 aa8.41□□□□□ -1.06
CDH8-213ENST00000584966 ZNF142P52746 1687 aaPredicted RBP8.4□□□□□ -1.06
CDH8-213ENST00000584966 PIK3C2BO00750 1634 aa8.4□□□□□ -1.06
CDH8-213ENST00000584966 ERVK-7P63135 1459 aa8.4□□□□□ -1.06
CDH8-213ENST00000584966 RPRD2Q5VT52 1461 aaKnown RBP8.4□□□□□ -1.06
CDH8-213ENST00000584966 NOS1P29475 1434 aa8.4□□□□□ -1.06
CDH8-213ENST00000584966 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
CDH8-213ENST00000584966 PTGDRQ13258 359 aa8.4□□□□□ -1.06
CDH8-213ENST00000584966 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
CDH8-213ENST00000584966 ESF1Q9H501 851 aaKnown RBP8.4□□□□□ -1.06
CDH8-213ENST00000584966 ARHGEF1Q92888 912 aaKnown RBP8.39□□□□□ -1.07
CDH8-213ENST00000584966 UBR1Q8IWV7 1749 aa8.39□□□□□ -1.07
CDH8-213ENST00000584966 PLA2R1Q13018 1463 aa8.38□□□□□ -1.07
CDH8-213ENST00000584966 LMTK3Q96Q04 1460 aa8.38□□□□□ -1.07
CDH8-213ENST00000584966 PTPRTO14522 1441 aa8.38□□□□□ -1.07
CDH8-213ENST00000584966 STRCQ7RTU9 1775 aa8.38□□□□□ -1.07
CDH8-213ENST00000584966 KDM5AP29375 1690 aaKnown RBP8.38□□□□□ -1.07
CDH8-213ENST00000584966 SMPD1P17405 629 aa8.38□□□□□ -1.07
CDH8-213ENST00000584966 MPHOSPH9Q99550 1183 aa8.38□□□□□ -1.07
CDH8-213ENST00000584966 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
CDH8-213ENST00000584966 MLLT3P42568 568 aaPredicted RBP8.37□□□□□ -1.07
CDH8-213ENST00000584966 TRIM52Q96A61 297 aa8.37□□□□□ -1.07
CDH8-213ENST00000584966 KIF1BO60333 1816 aa8.37□□□□□ -1.07
CDH8-213ENST00000584966 TNRQ92752 1358 aa8.36□□□□□ -1.07
CDH8-213ENST00000584966 UGGT1Q9NYU2 1555 aa8.36□□□□□ -1.07
CDH8-213ENST00000584966 CEP170BQ9Y4F5 1589 aaPredicted RBP8.36□□□□□ -1.07
CDH8-213ENST00000584966 ACIN1Q9UKV3 1341 aaKnown RBP8.36□□□□□ -1.07
CDH8-213ENST00000584966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
CDH8-213ENST00000584966 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
CDH8-213ENST00000584966 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
CDH8-213ENST00000584966 CLTCL1P53675 1640 aa8.36□□□□□ -1.07
CDH8-213ENST00000584966 TRPM2O94759 1503 aa8.35□□□□□ -1.07
CDH8-213ENST00000584966 A2ML1A8K2U0 1454 aa8.35□□□□□ -1.07
CDH8-213ENST00000584966 J3QL48 77 aa8.35□□□□□ -1.07
CDH8-213ENST00000584966 IDI1Q13907 227 aa8.35□□□□□ -1.07
CDH8-213ENST00000584966 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
CDH8-213ENST00000584966 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
CDH8-213ENST00000584966 NLRP1Q9C000 1473 aa8.34□□□□□ -1.07
CDH8-213ENST00000584966 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
CDH8-213ENST00000584966 FAM160A2Q8N612 972 aaPredicted RBP8.34□□□□□ -1.07
CDH8-213ENST00000584966 ZSCAN1Q8NBB4 408 aa8.34□□□□□ -1.07
CDH8-213ENST00000584966 SLC16A10Q8TF71 515 aa8.34□□□□□ -1.07
CDH8-213ENST00000584966 PCGF6Q9BYE7 350 aa8.34□□□□□ -1.07
CDH8-213ENST00000584966 UHRF1BP1Q6BDS2 1440 aa8.34□□□□□ -1.07
CDH8-213ENST00000584966 POLR1AO95602 1720 aaPredicted RBP8.33□□□□□ -1.08
CDH8-213ENST00000584966 GMPRP36959 345 aa8.33□□□□□ -1.08
CDH8-213ENST00000584966 THAP11Q96EK4 314 aa8.33□□□□□ -1.08
CDH8-213ENST00000584966 NUTM2FA1L443 756 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 TESPA1A2RU30 521 aaPredicted RBP8.32□□□□□ -1.08
CDH8-213ENST00000584966 TULP1O00294 542 aaPredicted RBP8.32□□□□□ -1.08
CDH8-213ENST00000584966 WNT7AO00755 349 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 MORN1Q5T089 497 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 HPS1Q92902 700 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 SLC52A1Q9NWF4 448 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 ANKRD30BQ9BXX2 1392 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 IFT172Q9UG01 1749 aa8.32□□□□□ -1.08
CDH8-213ENST00000584966 ADGRB3O60242 1522 aa8.31□□□□□ -1.08
CDH8-213ENST00000584966 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
CDH8-213ENST00000584966 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
CDH8-213ENST00000584966 HSPA2P54652 639 aa8.31□□□□□ -1.08
CDH8-213ENST00000584966 MRGPRX2Q96LB1 330 aa8.31□□□□□ -1.08
CDH8-213ENST00000584966 DHX57Q6P158 1386 aaKnown RBP8.31□□□□□ -1.08
CDH8-213ENST00000584966 ARHGAP23Q9P227 1491 aa8.31□□□□□ -1.08
CDH8-213ENST00000584966 PPLO60437 1756 aa8.3□□□□□ -1.08
CDH8-213ENST00000584966 SLIT1O75093 1534 aa8.3□□□□□ -1.08
CDH8-213ENST00000584966 SEMA3EO15041 775 aa8.3□□□□□ -1.08
CDH8-213ENST00000584966 FUT2Q10981 343 aa8.3□□□□□ -1.08
CDH8-213ENST00000584966 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
CDH8-213ENST00000584966 NEURL4Q96JN8 1562 aa8.3□□□□□ -1.08
CDH8-213ENST00000584966 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
CDH8-213ENST00000584966 RDH13Q8NBN7 331 aa8.29□□□□□ -1.08
CDH8-213ENST00000584966 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
CDH8-213ENST00000584966 ZC3H15Q8WU90 426 aaKnown RBP8.29□□□□□ -1.08
CDH8-213ENST00000584966 NXF1Q9UBU9 619 aaKnown RBP8.29□□□□□ -1.08
CDH8-213ENST00000584966 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
CDH8-213ENST00000584966 SPATA31E1Q6ZUB1 1445 aa8.29□□□□□ -1.08
CDH8-213ENST00000584966 TRIM32Q13049 653 aa8.28□□□□□ -1.08
CDH8-213ENST00000584966 THEMISQ8N1K5 641 aaPredicted RBP8.28□□□□□ -1.08
CDH8-213ENST00000584966 NEXMIFQ5QGS0 1516 aa8.28□□□□□ -1.08
CDH8-213ENST00000584966 ZFYVE9O95405 1425 aa8.28□□□□□ -1.08
CDH8-213ENST00000584966 OATP04181 439 aa8.27□□□□□ -1.09
CDH8-213ENST00000584966 FECHP22830 423 aa8.27□□□□□ -1.09
CDH8-213ENST00000584966 LTKP29376 864 aa8.27□□□□□ -1.09
CDH8-213ENST00000584966 ATP6V1AP38606 617 aa8.27□□□□□ -1.09
CDH8-213ENST00000584966 VEGFBP49765 207 aa8.27□□□□□ -1.09
CDH8-213ENST00000584966 MED14O60244 1454 aa8.26□□□□□ -1.09
CDH8-213ENST00000584966 TMEM2Q9UHN6 1383 aa8.26□□□□□ -1.09
CDH8-213ENST00000584966 NRXN3Q9Y4C0 1643 aa8.26□□□□□ -1.09
CDH8-213ENST00000584966 IRF7Q92985 503 aa8.26□□□□□ -1.09
CDH8-213ENST00000584966 IQGAP1P46940 1657 aa8.26□□□□□ -1.09
CDH8-213ENST00000584966 CCDC144AA2RUR9 1427 aa8.26□□□□□ -1.09
CDH8-213ENST00000584966 SETD1AO15047 1707 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms