RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
ERBB2-222ENST00000584908 PARD3Q8TEW0 1356 aa22.08■■□□□ 1.13
ERBB2-222ENST00000584908 BCL11BQ9C0K0 894 aaPredicted RBP22.08■■□□□ 1.13
ERBB2-222ENST00000584908 RREB1Q92766 1687 aa22.08■■□□□ 1.12
ERBB2-222ENST00000584908 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
ERBB2-222ENST00000584908 MTHFSP49914 203 aa22.06■■□□□ 1.12
ERBB2-222ENST00000584908 CAMKK2Q96RR4 588 aa22.06■■□□□ 1.12
ERBB2-222ENST00000584908 APBA3O96018 575 aa22.06■■□□□ 1.12
ERBB2-222ENST00000584908 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
ERBB2-222ENST00000584908 KAT6BQ8WYB5 2073 aa22.04■■□□□ 1.12
ERBB2-222ENST00000584908 IL13P35225 146 aa22.04■■□□□ 1.12
ERBB2-222ENST00000584908 DDX54Q8TDD1 881 aaKnown RBP22.04■■□□□ 1.12
ERBB2-222ENST00000584908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.04■■□□□ 1.12
ERBB2-222ENST00000584908 DOT1LQ8TEK3 1739 aa22.03■■□□□ 1.12
ERBB2-222ENST00000584908 PLSCR1O15162 318 aa22.03■■□□□ 1.12
ERBB2-222ENST00000584908 PTF1AQ7RTS3 328 aa22.03■■□□□ 1.12
ERBB2-222ENST00000584908 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
ERBB2-222ENST00000584908 BTAF1O14981 1849 aa22.02■■□□□ 1.12
ERBB2-222ENST00000584908 KDRP35968 1356 aa22.02■■□□□ 1.12
ERBB2-222ENST00000584908 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
ERBB2-222ENST00000584908 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
ERBB2-222ENST00000584908 NUP188Q5SRE5 1749 aa22.01■■□□□ 1.11
ERBB2-222ENST00000584908 EZH2Q15910 746 aaKnown RBP22.01■■□□□ 1.11
ERBB2-222ENST00000584908 KCNQ2O43526 872 aa22■■□□□ 1.11
ERBB2-222ENST00000584908 CYP27B1O15528 508 aa21.99■■□□□ 1.11
ERBB2-222ENST00000584908 ACSBG1Q96GR2 724 aa21.98■■□□□ 1.11
ERBB2-222ENST00000584908 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
ERBB2-222ENST00000584908 TOGARAM1Q9Y4F4 1720 aa21.96■■□□□ 1.11
ERBB2-222ENST00000584908 DIAPH1O60610 1272 aaKnown RBP21.96■■□□□ 1.11
ERBB2-222ENST00000584908 CNGB1Q14028 1251 aaPredicted RBP21.96■■□□□ 1.11
ERBB2-222ENST00000584908 NKX1-1Q15270 411 aaPredicted RBP21.96■■□□□ 1.11
ERBB2-222ENST00000584908 PPP2R1AP30153 589 aa21.95■■□□□ 1.1
ERBB2-222ENST00000584908 ITGB4P16144 1822 aa21.94■■□□□ 1.1
ERBB2-222ENST00000584908 AEBP1Q8IUX7 1158 aa21.94■■□□□ 1.1
ERBB2-222ENST00000584908 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
ERBB2-222ENST00000584908 SULT6B1Q6IMI4 303 aa21.93■■□□□ 1.1
ERBB2-222ENST00000584908 PROM2Q8N271 834 aa21.92■■□□□ 1.1
ERBB2-222ENST00000584908 LY75O60449 1722 aa21.91■■□□□ 1.1
ERBB2-222ENST00000584908 PHKG2P15735 406 aa21.91■■□□□ 1.1
ERBB2-222ENST00000584908 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
ERBB2-222ENST00000584908 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
ERBB2-222ENST00000584908 IFNL2Q8IZJ0 200 aa21.91■■□□□ 1.1
ERBB2-222ENST00000584908 PLEKHO1Q53GL0 409 aaPredicted RBP21.9■■□□□ 1.1
ERBB2-222ENST00000584908 CFAP53Q96M91 514 aa21.89■■□□□ 1.1
ERBB2-222ENST00000584908 TXNRD1Q16881 649 aa21.88■■□□□ 1.09
ERBB2-222ENST00000584908 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
ERBB2-222ENST00000584908 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
ERBB2-222ENST00000584908 RALBP1Q15311 655 aa21.86■■□□□ 1.09
ERBB2-222ENST00000584908 HMOX1P09601 288 aa21.84■■□□□ 1.09
ERBB2-222ENST00000584908 NBPF14Q5TI25 921 aa21.84■■□□□ 1.09
ERBB2-222ENST00000584908 ZNF530Q6P9A1 599 aaPredicted RBP21.84■■□□□ 1.09
ERBB2-222ENST00000584908 SCN11AQ9UI33 1791 aa21.84■■□□□ 1.09
ERBB2-222ENST00000584908 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
ERBB2-222ENST00000584908 VIRMAQ69YN4 1812 aaKnown RBP21.83■■□□□ 1.08
ERBB2-222ENST00000584908 SRCAPQ6ZRS2 3230 aa21.83■■□□□ 1.08
ERBB2-222ENST00000584908 DCAF5Q96JK2 942 aa21.82■■□□□ 1.08
ERBB2-222ENST00000584908 KDM6AO15550 1401 aaPredicted RBP21.82■■□□□ 1.08
ERBB2-222ENST00000584908 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
ERBB2-222ENST00000584908 SLC27A3Q5K4L6 730 aa21.81■■□□□ 1.08
ERBB2-222ENST00000584908 NUDCQ9Y266 331 aa21.81■■□□□ 1.08
ERBB2-222ENST00000584908 ADAMTS7Q9UKP4 1686 aa21.81■■□□□ 1.08
ERBB2-222ENST00000584908 ERVV-2B6SEH9 535 aa21.8■■□□□ 1.08
ERBB2-222ENST00000584908 R3HDM1Q15032 1099 aaKnown RBP21.8■■□□□ 1.08
ERBB2-222ENST00000584908 MPRIPQ6WCQ1 1025 aa21.8■■□□□ 1.08
ERBB2-222ENST00000584908 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
ERBB2-222ENST00000584908 PSDA5PKW4 1024 aaPredicted RBP21.8■■□□□ 1.08
ERBB2-222ENST00000584908 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
ERBB2-222ENST00000584908 C1orf141Q5JVX7 400 aa21.8■■□□□ 1.08
ERBB2-222ENST00000584908 PIGBQ92521 554 aa21.8■■□□□ 1.08
ERBB2-222ENST00000584908 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
ERBB2-222ENST00000584908 AKAP4Q5JQC9 854 aa21.79■■□□□ 1.08
ERBB2-222ENST00000584908 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
ERBB2-222ENST00000584908 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
ERBB2-222ENST00000584908 TAF1LQ8IZX4 1826 aa21.77■■□□□ 1.08
ERBB2-222ENST00000584908 LRP5O75197 1615 aa21.77■■□□□ 1.08
ERBB2-222ENST00000584908 MTHFSDQ2M296 383 aaKnown RBP21.77■■□□□ 1.07
ERBB2-222ENST00000584908 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.07
ERBB2-222ENST00000584908 CASZ1Q86V15 1759 aa21.77■■□□□ 1.07
ERBB2-222ENST00000584908 QSER1Q2KHR3 1735 aa21.76■■□□□ 1.07
ERBB2-222ENST00000584908 PALLDQ8WX93 1383 aa21.76■■□□□ 1.07
ERBB2-222ENST00000584908 MYBBP1AQ9BQG0 1328 aaKnown RBP21.76■■□□□ 1.07
ERBB2-222ENST00000584908 FCHSD2O94868 740 aa21.76■■□□□ 1.07
ERBB2-222ENST00000584908 SLC15A2Q16348 729 aa21.75■■□□□ 1.07
ERBB2-222ENST00000584908 C5P01031 1676 aa21.75■■□□□ 1.07
ERBB2-222ENST00000584908 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
ERBB2-222ENST00000584908 MRC1P22897 1456 aa21.74■■□□□ 1.07
ERBB2-222ENST00000584908 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
ERBB2-222ENST00000584908 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.07
ERBB2-222ENST00000584908 PRKRIP1Q9H875 184 aaPredicted RBP21.74■■□□□ 1.07
ERBB2-222ENST00000584908 STK32BQ9NY57 414 aa21.74■■□□□ 1.07
ERBB2-222ENST00000584908 PRKAR2BP31323 418 aa21.73■■□□□ 1.07
ERBB2-222ENST00000584908 CCNL1Q9UK58 526 aaPredicted RBP21.73■■□□□ 1.07
ERBB2-222ENST00000584908 HMGB2P26583 209 aaKnown RBP21.72■■□□□ 1.07
ERBB2-222ENST00000584908 GAS2L2Q8NHY3 880 aa21.72■■□□□ 1.07
ERBB2-222ENST00000584908 AKT1S1Q96B36 256 aa21.72■■□□□ 1.07
ERBB2-222ENST00000584908 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
ERBB2-222ENST00000584908 PHACTR3Q96KR7 559 aa21.71■■□□□ 1.07
ERBB2-222ENST00000584908 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
ERBB2-222ENST00000584908 ASAP1Q9ULH1 1129 aa21.71■■□□□ 1.07
ERBB2-222ENST00000584908 RNMTO43148 476 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms