RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 CAPN15O75808 1086 aa15.27■□□□□ 0.04
PGAP3-209ENST00000584620 KCNQ4P56696 695 aa15.27■□□□□ 0.04
PGAP3-209ENST00000584620 IL2RBP14784 551 aa15.26■□□□□ 0.03
PGAP3-209ENST00000584620 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
PGAP3-209ENST00000584620 IP6K1Q92551 441 aa15.25■□□□□ 0.03
PGAP3-209ENST00000584620 COL24A1Q17RW2 1714 aa15.25■□□□□ 0.03
PGAP3-209ENST00000584620 FBLN1P23142 703 aa15.24■□□□□ 0.03
PGAP3-209ENST00000584620 MAP3K19Q56UN5 1328 aa15.22■□□□□ 0.03
PGAP3-209ENST00000584620 MSH5O43196 834 aa15.22■□□□□ 0.03
PGAP3-209ENST00000584620 TRIM26Q12899 539 aaPredicted RBP15.22■□□□□ 0.03
PGAP3-209ENST00000584620 TUBGCP6Q96RT7 1819 aa15.22■□□□□ 0.03
PGAP3-209ENST00000584620 QSER1Q2KHR3 1735 aa15.21■□□□□ 0.03
PGAP3-209ENST00000584620 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
PGAP3-209ENST00000584620 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
PGAP3-209ENST00000584620 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
PGAP3-209ENST00000584620 COG3Q96JB2 828 aa15.21■□□□□ 0.03
PGAP3-209ENST00000584620 ADCY9O60503 1353 aa15.21■□□□□ 0.02
PGAP3-209ENST00000584620 ANKRD36BQ8N2N9 1353 aa15.21■□□□□ 0.02
PGAP3-209ENST00000584620 KIF3CO14782 793 aa15.2■□□□□ 0.02
PGAP3-209ENST00000584620 HOXC9P31274 260 aa15.2■□□□□ 0.02
PGAP3-209ENST00000584620 SLC27A3Q5K4L6 730 aa15.2■□□□□ 0.02
PGAP3-209ENST00000584620 COL13A1Q5TAT6 717 aaPredicted RBP15.2■□□□□ 0.02
PGAP3-209ENST00000584620 DNAJC5GQ8N7S2 189 aa15.2■□□□□ 0.02
PGAP3-209ENST00000584620 WWC3Q9ULE0 1092 aa15.2■□□□□ 0.02
PGAP3-209ENST00000584620 LTN1O94822 1766 aa15.19■□□□□ 0.02
PGAP3-209ENST00000584620 APLP1P51693 650 aa15.19■□□□□ 0.02
PGAP3-209ENST00000584620 USP47Q96K76 1375 aa15.19■□□□□ 0.02
PGAP3-209ENST00000584620 FYB1O15117 783 aa15.18■□□□□ 0.02
PGAP3-209ENST00000584620 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
PGAP3-209ENST00000584620 AMPHP49418 695 aa15.17■□□□□ 0.02
PGAP3-209ENST00000584620 TMF1P82094 1093 aa15.17■□□□□ 0.02
PGAP3-209ENST00000584620 DDX54Q8TDD1 881 aaKnown RBP15.17■□□□□ 0.02
PGAP3-209ENST00000584620 RRS1Q15050 365 aaKnown RBP15.16■□□□□ 0.02
PGAP3-209ENST00000584620 SYTL4Q96C24 671 aaPredicted RBP15.16■□□□□ 0.02
PGAP3-209ENST00000584620 GGNBP2Q9H3C7 697 aa15.16■□□□□ 0.02
PGAP3-209ENST00000584620 NBPF6Q5VWK0 638 aa15.14■□□□□ 0.01
PGAP3-209ENST00000584620 NBPF4Q96M43 638 aa15.14■□□□□ 0.01
PGAP3-209ENST00000584620 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
PGAP3-209ENST00000584620 RTL1A6NKG5 1358 aa15.13■□□□□ 0.01
PGAP3-209ENST00000584620 MEGF6O75095 1541 aa15.13■□□□□ 0.01
PGAP3-209ENST00000584620 CARD14Q9BXL6 1004 aa15.13■□□□□ 0.01
PGAP3-209ENST00000584620 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
PGAP3-209ENST00000584620 NSD2O96028 1365 aa15.12■□□□□ 0.01
PGAP3-209ENST00000584620 PRIM1P49642 420 aaKnown RBP15.12■□□□□ 0.01
PGAP3-209ENST00000584620 HTRA3P83110 453 aa15.12■□□□□ 0.01
PGAP3-209ENST00000584620 ZCRB1Q8TBF4 217 aaKnown RBP15.12■□□□□ 0.01
PGAP3-209ENST00000584620 TNS4Q8IZW8 715 aa15.11■□□□□ 0.01
PGAP3-209ENST00000584620 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
PGAP3-209ENST00000584620 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
PGAP3-209ENST00000584620 PRELPP51888 382 aa15.1■□□□□ 0.01
PGAP3-209ENST00000584620 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
PGAP3-209ENST00000584620 IGSF1Q8N6C5 1336 aa15.1■□□□□ 0.01
PGAP3-209ENST00000584620 TOMM70O94826 608 aa15.09■□□□□ 0.01
PGAP3-209ENST00000584620 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
PGAP3-209ENST00000584620 INSRP06213 1382 aa15.09■□□□□ 0.01
PGAP3-209ENST00000584620 LY75O60449 1722 aa15.08■□□□□ 0
PGAP3-209ENST00000584620 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
PGAP3-209ENST00000584620 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
PGAP3-209ENST00000584620 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
PGAP3-209ENST00000584620 RAPGEF4Q8WZA2 1011 aa15.06■□□□□ 0
PGAP3-209ENST00000584620 KLRG1Q96E93 195 aa15.06■□□□□ 0
PGAP3-209ENST00000584620 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
PGAP3-209ENST00000584620 FLT4P35916 1363 aa15.06■□□□□ 0
PGAP3-209ENST00000584620 KIF24Q5T7B8 1368 aa15.06■□□□□ 0
PGAP3-209ENST00000584620 NMRK2Q9NPI5 230 aa15.05■□□□□ -0
PGAP3-209ENST00000584620 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
PGAP3-209ENST00000584620 WDR90Q96KV7 1748 aa15.05■□□□□ -0
PGAP3-209ENST00000584620 RGPD2P0DJD1 1756 aa15.05■□□□□ -0
PGAP3-209ENST00000584620 DOT1LQ8TEK3 1739 aa15.04■□□□□ -0
PGAP3-209ENST00000584620 TATP17735 454 aaPredicted RBP15.04■□□□□ -0
PGAP3-209ENST00000584620 JMYQ8N9B5 988 aa15.04■□□□□ -0
PGAP3-209ENST00000584620 CYP27B1O15528 508 aa15.03■□□□□ -0
PGAP3-209ENST00000584620 SMIM5Q71RC9 77 aa15.03■□□□□ -0
PGAP3-209ENST00000584620 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
PGAP3-209ENST00000584620 NCAPD2Q15021 1401 aa15.01□□□□□ -0.01
PGAP3-209ENST00000584620 PCDH11XQ9BZA7 1347 aa15.01□□□□□ -0.01
PGAP3-209ENST00000584620 PCDH11YQ9BZA8 1340 aa15.01□□□□□ -0.01
PGAP3-209ENST00000584620 PCGF6Q9BYE7 350 aa15.01□□□□□ -0.01
PGAP3-209ENST00000584620 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
PGAP3-209ENST00000584620 AMIGO3Q86WK7 504 aa15□□□□□ -0.01
PGAP3-209ENST00000584620 PPM1GO15355 546 aaPredicted RBP14.99□□□□□ -0.01
PGAP3-209ENST00000584620 PHF14O94880 888 aa14.99□□□□□ -0.01
PGAP3-209ENST00000584620 FLAD1Q8NFF5 587 aa14.99□□□□□ -0.01
PGAP3-209ENST00000584620 POLKQ9UBT6 870 aa14.99□□□□□ -0.01
PGAP3-209ENST00000584620 KIF20BQ96Q89 1820 aa14.99□□□□□ -0.01
PGAP3-209ENST00000584620 C5P01031 1676 aa14.98□□□□□ -0.01
PGAP3-209ENST00000584620 RBM46Q8TBY0 533 aaKnown RBP14.98□□□□□ -0.01
PGAP3-209ENST00000584620 EYA1Q99502 592 aa14.98□□□□□ -0.01
PGAP3-209ENST00000584620 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
PGAP3-209ENST00000584620 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
PGAP3-209ENST00000584620 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
PGAP3-209ENST00000584620 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
PGAP3-209ENST00000584620 ARHGAP27Q6ZUM4 889 aa14.96□□□□□ -0.01
PGAP3-209ENST00000584620 PIGBQ92521 554 aa14.96□□□□□ -0.01
PGAP3-209ENST00000584620 BCS1LQ9Y276 419 aa14.96□□□□□ -0.01
PGAP3-209ENST00000584620 TAF1LQ8IZX4 1826 aa14.95□□□□□ -0.02
PGAP3-209ENST00000584620 HSPA5P11021 654 aaKnown RBP14.95□□□□□ -0.02
PGAP3-209ENST00000584620 AK7Q96M32 723 aa14.95□□□□□ -0.02
PGAP3-209ENST00000584620 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
PGAP3-209ENST00000584620 CICQ96RK0 1608 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms