RNA–Protein interactions for RNA: ENST00000584397.1

ARHGDIA-216, Transcript of Rho GDP dissociation inhibitor alpha, human

TSL 2

Gene ARHGDIA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGDIA-216	ENST00000584397	COL3A1	P02461	1466 aa	Predicted RBP	33.56	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	PPP2R1A	P30153	589 aa		33.55	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	SBF2	Q86WG5	1849 aa		33.55	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.54	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	KDR	P35968	1356 aa		33.53	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	DEFB132	Q7Z7B7	95 aa		33.53	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	DDX54	Q8TDD1	881 aa	Known RBP	33.52	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.52	■■■□□ 2.96
ARHGDIA-216	ENST00000584397	PKD1L3	Q7Z443	1732 aa		33.5	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.5	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	DIAPH1	O60610	1272 aa	Known RBP	33.5	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	BAG6	P46379	1132 aa		33.5	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	PTF1A	Q7RTS3	328 aa		33.48	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	AEBP1	Q8IUX7	1158 aa		33.47	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	PCDH11X	Q9BZA7	1347 aa		33.47	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	PCDH11Y	Q9BZA8	1340 aa		33.47	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	CYP27B1	O15528	508 aa		33.46	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	APBA3	O96018	575 aa		33.46	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	SULT6B1	Q6IMI4	303 aa		33.45	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	CAMKK2	Q96RR4	588 aa		33.45	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	SPG7	Q9UQ90	795 aa		33.45	■■■□□ 2.95
ARHGDIA-216	ENST00000584397	EN1	Q05925	392 aa	Predicted RBP	33.44	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	RALBP1	Q15311	655 aa		33.44	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	KCNQ2	O43526	872 aa		33.43	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	NHS	Q6T4R5	1651 aa		33.42	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	NKX1-1	Q15270	411 aa	Predicted RBP	33.42	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	PLSCR1	O15162	318 aa		33.41	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	CFAP53	Q96M91	514 aa		33.41	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	ACSBG1	Q96GR2	724 aa		33.4	■■■□□ 2.94
ARHGDIA-216	ENST00000584397	EZH2	Q15910	746 aa	Known RBP	33.37	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	AMOT	Q4VCS5	1084 aa		33.37	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.36	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.35	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	RGPD4	Q7Z3J3	1758 aa		33.35	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	PHKG2	P15735	406 aa		33.35	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	IFNL2	Q8IZJ0	200 aa		33.34	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	HMOX1	P09601	288 aa		33.33	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	PRIM1	P49642	420 aa	Known RBP	33.33	■■■□□ 2.93
ARHGDIA-216	ENST00000584397	DOT1L	Q8TEK3	1739 aa		33.31	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	NUDC	Q9Y266	331 aa		33.3	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	U2SURP	O15042	1029 aa	Known RBP	33.29	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	PROM2	Q8N271	834 aa		33.29	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.29	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	RREB1	Q92766	1687 aa		33.29	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	BTAF1	O14981	1849 aa		33.28	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.28	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	KAT6B	Q8WYB5	2073 aa		33.27	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	TOGARAM1	Q9Y4F4	1720 aa		33.26	■■■□□ 2.92
ARHGDIA-216	ENST00000584397	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.26	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	HSP90AB1	P08238	724 aa	Known RBP	33.24	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	RSPH6A	Q9H0K4	717 aa		33.24	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	SYTL4	Q96C24	671 aa	Predicted RBP	33.23	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	DCAF5	Q96JK2	942 aa		33.22	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	TXNRD1	Q16881	649 aa		33.21	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	NUP188	Q5SRE5	1749 aa		33.2	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	FCHSD2	O94868	740 aa		33.2	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.2	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
ARHGDIA-216	ENST00000584397	KDM6A	O15550	1401 aa	Predicted RBP	33.19	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	MTHFSD	Q2M296	383 aa	Known RBP	33.19	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	AKAP4	Q5JQC9	854 aa		33.19	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	C1orf141	Q5JVX7	400 aa		33.19	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	ERVV-2	B6SEH9	535 aa		33.18	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	ITGB4	P16144	1822 aa		33.17	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	PIGB	Q92521	554 aa		33.17	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	MPRIP	Q6WCQ1	1025 aa		33.16	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	PRKAR2B	P31323	418 aa		33.15	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	PHACTR3	Q96KR7	559 aa		33.14	■■■□□ 2.9
ARHGDIA-216	ENST00000584397	SLC27A3	Q5K4L6	730 aa		33.12	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	TMOD3	Q9NYL9	352 aa		33.12	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	LY75	O60449	1722 aa		33.11	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	GAS2L2	Q8NHY3	880 aa		33.11	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	LRRC4B	Q9NT99	713 aa		33.11	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	ADAMTS7	Q9UKP4	1686 aa		33.1	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	NBPF14	Q5TI25	921 aa		33.08	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	SMARCC1	Q92922	1105 aa	Predicted RBP	33.08	■■■□□ 2.89
ARHGDIA-216	ENST00000584397	PLEKHF1	Q96S99	279 aa		33.07	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.07	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	PALLD	Q8WX93	1383 aa		33.07	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	SCN11A	Q9UI33	1791 aa		33.06	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	PAPPA	Q13219	1627 aa		33.06	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	RNMT	O43148	476 aa	Known RBP	33.06	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	LGR6	Q9HBX8	967 aa		33.06	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	CABP4	P57796	275 aa		33.04	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	R3HDM1	Q15032	1099 aa	Known RBP	33.04	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	ATG3	Q9NT62	314 aa		33.04	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	ASAP1	Q9ULH1	1129 aa		33.04	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	MAP3K5	Q99683	1374 aa		33.04	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	MRC1	P22897	1456 aa		33.04	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	GNAT3	A8MTJ3	354 aa		33.02	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	NFATC2IP	Q8NCF5	419 aa		33.02	■■■□□ 2.88
ARHGDIA-216	ENST00000584397	PSD	A5PKW4	1024 aa	Predicted RBP	33.01	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	SLC52A2	Q9HAB3	445 aa		33.01	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	CCNL1	Q9UK58	526 aa	Predicted RBP	33.01	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	IL17RE	Q8NFR9	667 aa		33	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	PNN	Q9H307	717 aa	Known RBP	33	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	SLC15A2	Q16348	729 aa		32.98	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	CEMIP	Q8WUJ3	1361 aa		32.97	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	KCNQ4	P56696	695 aa		32.97	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	AKT1S1	Q96B36	256 aa		32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms