RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 HTRA3P83110 453 aa10.26□□□□□ -0.77
CTC1-211ENST00000583254 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
CTC1-211ENST00000583254 DDX54Q8TDD1 881 aaKnown RBP10.26□□□□□ -0.77
CTC1-211ENST00000583254 CCNL1Q9UK58 526 aaPredicted RBP10.26□□□□□ -0.77
CTC1-211ENST00000583254 PCNTO95613 3336 aa10.26□□□□□ -0.77
CTC1-211ENST00000583254 ANKRD36BQ8N2N9 1353 aa10.26□□□□□ -0.77
CTC1-211ENST00000583254 USP54Q70EL1 1684 aa10.25□□□□□ -0.77
CTC1-211ENST00000583254 TOMM70O94826 608 aa10.25□□□□□ -0.77
CTC1-211ENST00000583254 PRIM1P49642 420 aaKnown RBP10.25□□□□□ -0.77
CTC1-211ENST00000583254 TTC21AQ8NDW8 1320 aa10.25□□□□□ -0.77
CTC1-211ENST00000583254 MON2Q7Z3U7 1717 aa10.24□□□□□ -0.77
CTC1-211ENST00000583254 JMYQ8N9B5 988 aa10.24□□□□□ -0.77
CTC1-211ENST00000583254 ANKRD24Q8TF21 1146 aa10.24□□□□□ -0.77
CTC1-211ENST00000583254 KLRG1Q96E93 195 aa10.24□□□□□ -0.77
CTC1-211ENST00000583254 TOGARAM1Q9Y4F4 1720 aa10.24□□□□□ -0.77
CTC1-211ENST00000583254 TAF1LQ8IZX4 1826 aa10.23□□□□□ -0.77
CTC1-211ENST00000583254 FAM208AQ9UK61 1670 aaKnown RBP10.23□□□□□ -0.77
CTC1-211ENST00000583254 NMRK2Q9NPI5 230 aa10.23□□□□□ -0.77
CTC1-211ENST00000583254 RAB3GAP2Q9H2M9 1393 aa10.23□□□□□ -0.77
CTC1-211ENST00000583254 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.77
CTC1-211ENST00000583254 KTN1Q86UP2 1357 aaKnown RBP10.21□□□□□ -0.78
CTC1-211ENST00000583254 USP47Q96K76 1375 aa10.21□□□□□ -0.78
CTC1-211ENST00000583254 C4BP0C0L5 1744 aa10.21□□□□□ -0.78
CTC1-211ENST00000583254 RGPD2P0DJD1 1756 aa10.2□□□□□ -0.78
CTC1-211ENST00000583254 UBR3Q6ZT12 1888 aa10.2□□□□□ -0.78
CTC1-211ENST00000583254 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
CTC1-211ENST00000583254 EVC2Q86UK5 1308 aa10.2□□□□□ -0.78
CTC1-211ENST00000583254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.2□□□□□ -0.78
CTC1-211ENST00000583254 RBM46Q8TBY0 533 aaKnown RBP10.2□□□□□ -0.78
CTC1-211ENST00000583254 KIAA1551Q9HCM1 1747 aa10.2□□□□□ -0.78
CTC1-211ENST00000583254 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
CTC1-211ENST00000583254 MEGF6O75095 1541 aa10.19□□□□□ -0.78
CTC1-211ENST00000583254 SLC34A2O95436 690 aa10.19□□□□□ -0.78
CTC1-211ENST00000583254 AMIGO3Q86WK7 504 aa10.19□□□□□ -0.78
CTC1-211ENST00000583254 SMIM5Q71RC9 77 aa10.18□□□□□ -0.78
CTC1-211ENST00000583254 NME9Q86XW9 330 aa10.18□□□□□ -0.78
CTC1-211ENST00000583254 FLAD1Q8NFF5 587 aa10.18□□□□□ -0.78
CTC1-211ENST00000583254 LTV1Q96GA3 475 aaPredicted RBP10.18□□□□□ -0.78
CTC1-211ENST00000583254 PKD1L3Q7Z443 1732 aa10.18□□□□□ -0.78
CTC1-211ENST00000583254 PXDNLA1KZ92 1463 aa10.17□□□□□ -0.78
CTC1-211ENST00000583254 KIF13BQ9NQT8 1826 aa10.17□□□□□ -0.78
CTC1-211ENST00000583254 PHF14O94880 888 aa10.17□□□□□ -0.78
CTC1-211ENST00000583254 C16orf71Q8IYS4 520 aaPredicted RBP10.17□□□□□ -0.78
CTC1-211ENST00000583254 PALLDQ8WX93 1383 aa10.16□□□□□ -0.78
CTC1-211ENST00000583254 HSPA1AP0DMV8 641 aaKnown RBP10.16□□□□□ -0.78
CTC1-211ENST00000583254 HSPA1BP0DMV9 641 aaKnown RBP10.16□□□□□ -0.78
CTC1-211ENST00000583254 ZCRB1Q8TBF4 217 aaKnown RBP10.16□□□□□ -0.78
CTC1-211ENST00000583254 AK7Q96M32 723 aa10.16□□□□□ -0.78
CTC1-211ENST00000583254 KCPQ6ZWJ8 1503 aa10.16□□□□□ -0.78
CTC1-211ENST00000583254 SBNO2Q9Y2G9 1366 aa10.15□□□□□ -0.78
CTC1-211ENST00000583254 FSTL1Q12841 308 aa10.15□□□□□ -0.78
CTC1-211ENST00000583254 BCS1LQ9Y276 419 aa10.15□□□□□ -0.78
CTC1-211ENST00000583254 CD163L1Q9NR16 1453 aa10.15□□□□□ -0.78
CTC1-211ENST00000583254 TNRC6CQ9HCJ0 1690 aaKnown RBP10.15□□□□□ -0.79
CTC1-211ENST00000583254 BRCA1P38398 1863 aaKnown RBP10.15□□□□□ -0.79
CTC1-211ENST00000583254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.14□□□□□ -0.79
CTC1-211ENST00000583254 ARHGAP27Q6ZUM4 889 aa10.14□□□□□ -0.79
CTC1-211ENST00000583254 IP6K1Q92551 441 aa10.14□□□□□ -0.79
CTC1-211ENST00000583254 NSD3Q9BZ95 1437 aa10.14□□□□□ -0.79
CTC1-211ENST00000583254 PLEKHG2Q9H7P9 1386 aa10.14□□□□□ -0.79
CTC1-211ENST00000583254 ITGB4P16144 1822 aa10.13□□□□□ -0.79
CTC1-211ENST00000583254 ARFGEF1Q9Y6D6 1849 aa10.12□□□□□ -0.79
CTC1-211ENST00000583254 C9orf131Q5VYM1 1079 aa10.12□□□□□ -0.79
CTC1-211ENST00000583254 C10orf71Q711Q0 1435 aa10.12□□□□□ -0.79
CTC1-211ENST00000583254 EDC4Q6P2E9 1401 aaKnown RBP10.11□□□□□ -0.79
CTC1-211ENST00000583254 A0A0G2JLW4 131 aa10.11□□□□□ -0.79
CTC1-211ENST00000583254 MMP10P09238 476 aa10.11□□□□□ -0.79
CTC1-211ENST00000583254 SSFA2P28290 1259 aa10.11□□□□□ -0.79
CTC1-211ENST00000583254 MAP2P11137 1827 aaKnown RBP10.11□□□□□ -0.79
CTC1-211ENST00000583254 FCHSD2O94868 740 aa10.1□□□□□ -0.79
CTC1-211ENST00000583254 HOXC9P31274 260 aa10.1□□□□□ -0.79
CTC1-211ENST00000583254 MPRIPQ6WCQ1 1025 aa10.1□□□□□ -0.79
CTC1-211ENST00000583254 USHBP1Q8N6Y0 703 aa10.1□□□□□ -0.79
CTC1-211ENST00000583254 RRAGCQ9HB90 399 aa10.1□□□□□ -0.79
CTC1-211ENST00000583254 MAP3K19Q56UN5 1328 aa10.09□□□□□ -0.79
CTC1-211ENST00000583254 KDM2BQ8NHM5 1336 aa10.09□□□□□ -0.79
CTC1-211ENST00000583254 HMGB2P26583 209 aaKnown RBP10.09□□□□□ -0.79
CTC1-211ENST00000583254 TGFB2P61812 414 aa10.09□□□□□ -0.79
CTC1-211ENST00000583254 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
CTC1-211ENST00000583254 SMC1BQ8NDV3 1235 aa10.09□□□□□ -0.79
CTC1-211ENST00000583254 C4AP0C0L4 1744 aa10.09□□□□□ -0.79
CTC1-211ENST00000583254 GNPATO15228 680 aa10.08□□□□□ -0.8
CTC1-211ENST00000583254 DPEP1P16444 411 aa10.08□□□□□ -0.8
CTC1-211ENST00000583254 AMPHP49418 695 aa10.08□□□□□ -0.8
CTC1-211ENST00000583254 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
CTC1-211ENST00000583254 RNF181Q9P0P0 153 aa10.08□□□□□ -0.8
CTC1-211ENST00000583254 A0A1W2PP64 1363 aa10.08□□□□□ -0.8
CTC1-211ENST00000583254 SBF1O95248 1867 aa10.08□□□□□ -0.8
CTC1-211ENST00000583254 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 FBLN1P23142 703 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 NBPF6Q5VWK0 638 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 HDGFL2Q7Z4V5 671 aaPredicted RBP10.07□□□□□ -0.8
CTC1-211ENST00000583254 TMC1Q8TDI8 760 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 RAPGEF4Q8WZA2 1011 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 NBPF4Q96M43 638 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
CTC1-211ENST00000583254 ROCK2O75116 1388 aaKnown RBP10.06□□□□□ -0.8
CTC1-211ENST00000583254 TATP17735 454 aaPredicted RBP10.06□□□□□ -0.8
CTC1-211ENST00000583254 SLC12A5Q9H2X9 1139 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms