RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 RGPD2P0DJD1 1756 aa18.58■□□□□ 0.57
CCDC57-217ENST00000583053 PTF1AQ7RTS3 328 aa18.58■□□□□ 0.56
CCDC57-217ENST00000583053 TNS1Q9HBL0 1735 aaKnown RBP18.57■□□□□ 0.56
CCDC57-217ENST00000583053 PARD3Q8TEW0 1356 aa18.57■□□□□ 0.56
CCDC57-217ENST00000583053 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
CCDC57-217ENST00000583053 PLSCR1O15162 318 aa18.57■□□□□ 0.56
CCDC57-217ENST00000583053 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
CCDC57-217ENST00000583053 KCNQ2O43526 872 aa18.56■□□□□ 0.56
CCDC57-217ENST00000583053 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
CCDC57-217ENST00000583053 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
CCDC57-217ENST00000583053 IL13P35225 146 aa18.55■□□□□ 0.56
CCDC57-217ENST00000583053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC57-217ENST00000583053 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
CCDC57-217ENST00000583053 CYP27B1O15528 508 aa18.52■□□□□ 0.56
CCDC57-217ENST00000583053 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.55
CCDC57-217ENST00000583053 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
CCDC57-217ENST00000583053 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
CCDC57-217ENST00000583053 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
CCDC57-217ENST00000583053 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
CCDC57-217ENST00000583053 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
CCDC57-217ENST00000583053 AEBP1Q8IUX7 1158 aa18.49■□□□□ 0.55
CCDC57-217ENST00000583053 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
CCDC57-217ENST00000583053 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
CCDC57-217ENST00000583053 KDRP35968 1356 aa18.48■□□□□ 0.55
CCDC57-217ENST00000583053 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
CCDC57-217ENST00000583053 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
CCDC57-217ENST00000583053 IFNL2Q8IZJ0 200 aa18.48■□□□□ 0.55
CCDC57-217ENST00000583053 PROM2Q8N271 834 aa18.48■□□□□ 0.55
CCDC57-217ENST00000583053 SHANK3Q9BYB0 1731 aa18.48■□□□□ 0.55
CCDC57-217ENST00000583053 TXNRD1Q16881 649 aa18.47■□□□□ 0.55
CCDC57-217ENST00000583053 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
CCDC57-217ENST00000583053 PLEKHO1Q53GL0 409 aaPredicted RBP18.47■□□□□ 0.55
CCDC57-217ENST00000583053 PHKG2P15735 406 aa18.46■□□□□ 0.55
CCDC57-217ENST00000583053 NBPF14Q5TI25 921 aa18.46■□□□□ 0.55
CCDC57-217ENST00000583053 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
CCDC57-217ENST00000583053 PKD1L3Q7Z443 1732 aa18.45■□□□□ 0.54
CCDC57-217ENST00000583053 HMOX1P09601 288 aa18.44■□□□□ 0.54
CCDC57-217ENST00000583053 R3HDM1Q15032 1099 aaKnown RBP18.44■□□□□ 0.54
CCDC57-217ENST00000583053 COL3A1P02461 1466 aaPredicted RBP18.44■□□□□ 0.54
CCDC57-217ENST00000583053 RGPD3A6NKT7 1758 aaPredicted RBP18.43■□□□□ 0.54
CCDC57-217ENST00000583053 RGPD4Q7Z3J3 1758 aa18.43■□□□□ 0.54
CCDC57-217ENST00000583053 PSDA5PKW4 1024 aaPredicted RBP18.43■□□□□ 0.54
CCDC57-217ENST00000583053 RREB1Q92766 1687 aa18.42■□□□□ 0.54
CCDC57-217ENST00000583053 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
CCDC57-217ENST00000583053 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
CCDC57-217ENST00000583053 HSP90AB1P08238 724 aaKnown RBP18.41■□□□□ 0.54
CCDC57-217ENST00000583053 ZNF530Q6P9A1 599 aaPredicted RBP18.41■□□□□ 0.54
CCDC57-217ENST00000583053 DOT1LQ8TEK3 1739 aa18.4■□□□□ 0.54
CCDC57-217ENST00000583053 RALBP1Q15311 655 aa18.4■□□□□ 0.54
CCDC57-217ENST00000583053 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
CCDC57-217ENST00000583053 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
CCDC57-217ENST00000583053 SLC27A3Q5K4L6 730 aa18.39■□□□□ 0.53
CCDC57-217ENST00000583053 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
CCDC57-217ENST00000583053 NUP188Q5SRE5 1749 aa18.39■□□□□ 0.53
CCDC57-217ENST00000583053 BTAF1O14981 1849 aa18.38■□□□□ 0.53
CCDC57-217ENST00000583053 PIGBQ92521 554 aa18.38■□□□□ 0.53
CCDC57-217ENST00000583053 LRRC4BQ9NT99 713 aa18.38■□□□□ 0.53
CCDC57-217ENST00000583053 ERVV-2B6SEH9 535 aa18.37■□□□□ 0.53
CCDC57-217ENST00000583053 ANO8Q9HCE9 1232 aaPredicted RBP18.37■□□□□ 0.53
CCDC57-217ENST00000583053 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
CCDC57-217ENST00000583053 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
CCDC57-217ENST00000583053 STK32BQ9NY57 414 aa18.36■□□□□ 0.53
CCDC57-217ENST00000583053 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
CCDC57-217ENST00000583053 SLC15A2Q16348 729 aa18.35■□□□□ 0.53
CCDC57-217ENST00000583053 MTHFSDQ2M296 383 aaKnown RBP18.35■□□□□ 0.53
CCDC57-217ENST00000583053 SMARCC1Q92922 1105 aaPredicted RBP18.35■□□□□ 0.53
CCDC57-217ENST00000583053 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
CCDC57-217ENST00000583053 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCDC57-217ENST00000583053 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
CCDC57-217ENST00000583053 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
CCDC57-217ENST00000583053 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
CCDC57-217ENST00000583053 TOGARAM1Q9Y4F4 1720 aa18.33■□□□□ 0.52
CCDC57-217ENST00000583053 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
CCDC57-217ENST00000583053 FCHSD2O94868 740 aa18.32■□□□□ 0.52
CCDC57-217ENST00000583053 KCNQ4P56696 695 aa18.32■□□□□ 0.52
CCDC57-217ENST00000583053 CABP4P57796 275 aa18.32■□□□□ 0.52
CCDC57-217ENST00000583053 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
CCDC57-217ENST00000583053 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
CCDC57-217ENST00000583053 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
CCDC57-217ENST00000583053 GAS2L2Q8NHY3 880 aa18.31■□□□□ 0.52
CCDC57-217ENST00000583053 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
CCDC57-217ENST00000583053 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
CCDC57-217ENST00000583053 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
CCDC57-217ENST00000583053 KAT6BQ8WYB5 2073 aa18.3■□□□□ 0.52
CCDC57-217ENST00000583053 ZNF827Q17R98 1081 aa18.29■□□□□ 0.52
CCDC57-217ENST00000583053 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
CCDC57-217ENST00000583053 PRKRIP1Q9H875 184 aaPredicted RBP18.29■□□□□ 0.52
CCDC57-217ENST00000583053 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
CCDC57-217ENST00000583053 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
CCDC57-217ENST00000583053 RNMTO43148 476 aaKnown RBP18.28■□□□□ 0.52
CCDC57-217ENST00000583053 PHACTR3Q96KR7 559 aa18.28■□□□□ 0.52
CCDC57-217ENST00000583053 LY75O60449 1722 aa18.27■□□□□ 0.52
CCDC57-217ENST00000583053 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
CCDC57-217ENST00000583053 SIK1P57059 783 aa18.27■□□□□ 0.52
CCDC57-217ENST00000583053 SLC52A2Q9HAB3 445 aa18.27■□□□□ 0.52
CCDC57-217ENST00000583053 SRCAPQ6ZRS2 3230 aa18.27■□□□□ 0.52
CCDC57-217ENST00000583053 ITGB4P16144 1822 aa18.26■□□□□ 0.51
CCDC57-217ENST00000583053 GNAT3A8MTJ3 354 aa18.26■□□□□ 0.51
CCDC57-217ENST00000583053 PDGFDQ9GZP0 370 aaPredicted RBP18.26■□□□□ 0.51
CCDC57-217ENST00000583053 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms