RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 KRT18P05783 430 aaKnown RBP19.35■□□□□ 0.69
ERBB2-214ENST00000583038 MYL6BP14649 208 aa19.35■□□□□ 0.69
ERBB2-214ENST00000583038 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
ERBB2-214ENST00000583038 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
ERBB2-214ENST00000583038 SOGA3Q5TF21 947 aa19.34■□□□□ 0.69
ERBB2-214ENST00000583038 DUSP27Q5VZP5 1158 aa19.34■□□□□ 0.69
ERBB2-214ENST00000583038 CEP57L1Q8IYX8 460 aa19.34■□□□□ 0.69
ERBB2-214ENST00000583038 AMOTQ4VCS5 1084 aa19.34■□□□□ 0.69
ERBB2-214ENST00000583038 PPFIBP1Q86W92 1011 aa19.34■□□□□ 0.69
ERBB2-214ENST00000583038 CEBPZQ03701 1054 aaKnown RBP19.34■□□□□ 0.69
ERBB2-214ENST00000583038 LARP1Q6PKG0 1096 aaKnown RBP19.34■□□□□ 0.69
ERBB2-214ENST00000583038 SPATA32Q96LK8 384 aa19.34■□□□□ 0.69
ERBB2-214ENST00000583038 GRPEL1Q9HAV7 217 aa19.34■□□□□ 0.69
ERBB2-214ENST00000583038 RARSP54136 660 aaKnown RBP19.33■□□□□ 0.69
ERBB2-214ENST00000583038 CAMSAP2Q08AD1 1489 aa19.33■□□□□ 0.69
ERBB2-214ENST00000583038 NSD2O96028 1365 aa19.33■□□□□ 0.68
ERBB2-214ENST00000583038 UBAC1Q9BSL1 405 aa19.33■□□□□ 0.68
ERBB2-214ENST00000583038 ABCC5O15440 1437 aa19.33■□□□□ 0.68
ERBB2-214ENST00000583038 FKBP4Q02790 459 aaKnown RBP eCLIP19.33■□□□□ 0.68
ERBB2-214ENST00000583038 STK3Q13188 491 aa19.33■□□□□ 0.68
ERBB2-214ENST00000583038 IL1RAPL2Q9NP60 686 aa19.33■□□□□ 0.68
ERBB2-214ENST00000583038 ARHGEF11O15085 1522 aa19.32■□□□□ 0.68
ERBB2-214ENST00000583038 HSP90AB2PQ58FF8 381 aa19.32■□□□□ 0.68
ERBB2-214ENST00000583038 NKTRP30414 1462 aaKnown RBP19.32■□□□□ 0.68
ERBB2-214ENST00000583038 STARD3NLO95772 234 aa19.32■□□□□ 0.68
ERBB2-214ENST00000583038 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
ERBB2-214ENST00000583038 ZFYVE27Q5T4F4 411 aa19.32■□□□□ 0.68
ERBB2-214ENST00000583038 CWC27Q6UX04 472 aaKnown RBP19.32■□□□□ 0.68
ERBB2-214ENST00000583038 SYCP1Q15431 976 aa19.32■□□□□ 0.68
ERBB2-214ENST00000583038 AKAP2Q9Y2D5 859 aa19.32■□□□□ 0.68
ERBB2-214ENST00000583038 CUL7Q14999 1698 aa19.31■□□□□ 0.68
ERBB2-214ENST00000583038 NUP62CLQ9H1M0 184 aa19.31■□□□□ 0.68
ERBB2-214ENST00000583038 MX1P20591 662 aa19.31■□□□□ 0.68
ERBB2-214ENST00000583038 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
ERBB2-214ENST00000583038 SSH1Q8WYL5 1049 aa19.3■□□□□ 0.68
ERBB2-214ENST00000583038 IMMTQ16891 758 aaKnown RBP19.3■□□□□ 0.68
ERBB2-214ENST00000583038 U3KPZ7 1027 aaPredicted RBP19.3■□□□□ 0.68
ERBB2-214ENST00000583038 TDO2P48775 406 aa19.3■□□□□ 0.68
ERBB2-214ENST00000583038 BMP2KQ9NSY1 1161 aaPredicted RBP19.3■□□□□ 0.68
ERBB2-214ENST00000583038 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
ERBB2-214ENST00000583038 KDM4AO75164 1064 aa19.29■□□□□ 0.68
ERBB2-214ENST00000583038 IGHMBP2P38935 993 aaKnown RBP19.29■□□□□ 0.68
ERBB2-214ENST00000583038 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
ERBB2-214ENST00000583038 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
ERBB2-214ENST00000583038 PTPN23Q9H3S7 1636 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 EXOC6BQ9Y2D4 811 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 CD109Q6YHK3 1445 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 NCOA1Q15788 1441 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 SMTNL1A8MU46 457 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 CCDC112Q8NEF3 446 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
ERBB2-214ENST00000583038 SH2B1Q9NRF2 756 aaPredicted RBP19.28■□□□□ 0.68
ERBB2-214ENST00000583038 PLEKHH1Q9ULM0 1364 aa19.27■□□□□ 0.68
ERBB2-214ENST00000583038 TTLL5Q6EMB2 1281 aa19.27■□□□□ 0.68
ERBB2-214ENST00000583038 MAP4K4O95819 1239 aaPredicted RBP19.27■□□□□ 0.68
ERBB2-214ENST00000583038 CCDC66A2RUB6 948 aa19.27■□□□□ 0.67
ERBB2-214ENST00000583038 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
ERBB2-214ENST00000583038 CEP131Q9UPN4 1083 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 KIF14Q15058 1648 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 LAMC3Q9Y6N6 1575 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 ERLIN2O94905 339 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 SPC24Q8NBT2 197 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 WWC2Q6AWC2 1192 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 ZNF287Q9HBT7 754 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 LRP2BPQ9P2M1 347 aa19.26■□□□□ 0.67
ERBB2-214ENST00000583038 LRPPRCP42704 1394 aaKnown RBP19.26■□□□□ 0.67
ERBB2-214ENST00000583038 SCAND2PQ9GZW5 306 aaPredicted RBP19.26■□□□□ 0.67
ERBB2-214ENST00000583038 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
ERBB2-214ENST00000583038 AIDAQ96BJ3 306 aa19.25■□□□□ 0.67
ERBB2-214ENST00000583038 PTPRCP08575 1304 aa19.25■□□□□ 0.67
ERBB2-214ENST00000583038 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
ERBB2-214ENST00000583038 UPF3BQ9BZI7 483 aaKnown RBP19.25■□□□□ 0.67
ERBB2-214ENST00000583038 RAI14Q9P0K7 980 aa19.25■□□□□ 0.67
ERBB2-214ENST00000583038 SCAF11Q99590 1463 aaKnown RBP19.25■□□□□ 0.67
ERBB2-214ENST00000583038 ZNF652Q9Y2D9 606 aa19.25■□□□□ 0.67
ERBB2-214ENST00000583038 ADGRL1O94910 1474 aa19.25■□□□□ 0.67
ERBB2-214ENST00000583038 RPRD2Q5VT52 1461 aaKnown RBP19.25■□□□□ 0.67
ERBB2-214ENST00000583038 MAP3K11Q16584 847 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 DEF6Q9H4E7 631 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 TTC21BQ7Z4L5 1316 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 ERLIN1O75477 346 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 CASTP20810 708 aaKnown RBP19.24■□□□□ 0.67
ERBB2-214ENST00000583038 ATP2B2Q01814 1243 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 CCDC196A0A1B0GTZ2 297 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 MCM10Q7L590 875 aa19.24■□□□□ 0.67
ERBB2-214ENST00000583038 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
ERBB2-214ENST00000583038 IDH1O75874 414 aaKnown RBP19.23■□□□□ 0.67
ERBB2-214ENST00000583038 ZC3H6P61129 1189 aaKnown RBP19.23■□□□□ 0.67
ERBB2-214ENST00000583038 PATL2C9JE40 543 aaKnown RBP19.23■□□□□ 0.67
ERBB2-214ENST00000583038 HSP90AB3PQ58FF7 597 aa19.23■□□□□ 0.67
ERBB2-214ENST00000583038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.23■□□□□ 0.67
ERBB2-214ENST00000583038 DBF4Q9UBU7 674 aaPredicted RBP19.22■□□□□ 0.67
ERBB2-214ENST00000583038 FAM135AQ9P2D6 1515 aa19.22■□□□□ 0.67
ERBB2-214ENST00000583038 IFIT1P09914 478 aaKnown RBP19.22■□□□□ 0.67
ERBB2-214ENST00000583038 METTL24Q5JXM2 366 aa19.22■□□□□ 0.67
ERBB2-214ENST00000583038 WAPLQ7Z5K2 1190 aa19.22■□□□□ 0.67
ERBB2-214ENST00000583038 NUTM1Q86Y26 1132 aa19.22■□□□□ 0.67
ERBB2-214ENST00000583038 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms