RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 NRKQ7Z2Y5 1582 aa12.59□□□□□ -0.39
TRAPPC8-211ENST00000582539 ERC1Q8IUD2 1116 aa12.59□□□□□ -0.39
TRAPPC8-211ENST00000582539 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
TRAPPC8-211ENST00000582539 SOX12O15370 315 aa12.58□□□□□ -0.4
TRAPPC8-211ENST00000582539 ZNF530Q6P9A1 599 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC8-211ENST00000582539 AEBP2Q6ZN18 517 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC8-211ENST00000582539 CDCA7Q9BWT1 371 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC8-211ENST00000582539 NOB1Q9ULX3 412 aaKnown RBP12.58□□□□□ -0.4
TRAPPC8-211ENST00000582539 CHL1O00533 1208 aa12.57□□□□□ -0.4
TRAPPC8-211ENST00000582539 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
TRAPPC8-211ENST00000582539 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
TRAPPC8-211ENST00000582539 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
TRAPPC8-211ENST00000582539 KDRP35968 1356 aa12.57□□□□□ -0.4
TRAPPC8-211ENST00000582539 PLIN1O60240 522 aa12.56□□□□□ -0.4
TRAPPC8-211ENST00000582539 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC8-211ENST00000582539 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
TRAPPC8-211ENST00000582539 RGS3P49796 1198 aa12.56□□□□□ -0.4
TRAPPC8-211ENST00000582539 GNAI2P04899 355 aa12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 SSH2Q76I76 1423 aa12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 BCAR3O75815 825 aa12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
TRAPPC8-211ENST00000582539 EVA1CP58658 441 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 BACH2Q9BYV9 841 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 REC8O95072 547 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 PANK1Q8TE04 598 aa12.54□□□□□ -0.4
TRAPPC8-211ENST00000582539 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 GCP02774 474 aa12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 VAMP4O75379 141 aa12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 HDGFL1Q5TGJ6 251 aa12.53□□□□□ -0.4
TRAPPC8-211ENST00000582539 ALDH1L1O75891 902 aa12.52□□□□□ -0.4
TRAPPC8-211ENST00000582539 FKBP5Q13451 457 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC8-211ENST00000582539 ANKRD24Q8TF21 1146 aa12.52□□□□□ -0.4
TRAPPC8-211ENST00000582539 USP54Q70EL1 1684 aa12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 INTS3Q68E01 1043 aaKnown RBP12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 HIP1O00291 1037 aa12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 EYA1Q99502 592 aa12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 MST1RQ04912 1400 aa12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 USP19O94966 1318 aa12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 C1orf167Q5SNV9 1468 aa12.52□□□□□ -0.41
TRAPPC8-211ENST00000582539 TRIM27P14373 513 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 OS9Q13438 667 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 RUFY2Q8WXA3 655 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 UBTFL1P0CB47 393 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 TNS3Q68CZ2 1445 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 TMEM94Q12767 1356 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 ERC2O15083 957 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 PRDM11Q9NQV5 511 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
TRAPPC8-211ENST00000582539 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
TRAPPC8-211ENST00000582539 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-211ENST00000582539 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC8-211ENST00000582539 MAP2P11137 1827 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-211ENST00000582539 CDC45O75419 566 aa12.5□□□□□ -0.41
TRAPPC8-211ENST00000582539 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-211ENST00000582539 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
TRAPPC8-211ENST00000582539 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
TRAPPC8-211ENST00000582539 ABCC4O15439 1325 aa12.49□□□□□ -0.41
TRAPPC8-211ENST00000582539 PXDNLA1KZ92 1463 aa12.49□□□□□ -0.41
TRAPPC8-211ENST00000582539 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
TRAPPC8-211ENST00000582539 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
TRAPPC8-211ENST00000582539 FOXO3O43524 673 aa12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 DCAF5Q96JK2 942 aa12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 LARP1Q6PKG0 1096 aaKnown RBP12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 AOX1Q06278 1338 aa12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 MCM2P49736 904 aa12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
TRAPPC8-211ENST00000582539 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 PCDH11XQ9BZA7 1347 aa12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 PCDH11YQ9BZA8 1340 aa12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 TICAM2Q86XR7 235 aa12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 LRRC59Q96AG4 307 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 MTHFSDQ2M296 383 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 ANKRD45Q5TZF3 282 aa12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
TRAPPC8-211ENST00000582539 ZBTB40Q9NUA8 1239 aa12.46□□□□□ -0.41
TRAPPC8-211ENST00000582539 CABP4P57796 275 aa12.46□□□□□ -0.41
TRAPPC8-211ENST00000582539 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.41
TRAPPC8-211ENST00000582539 C9orf78Q9NZ63 289 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-211ENST00000582539 CPDO75976 1380 aa12.46□□□□□ -0.41
TRAPPC8-211ENST00000582539 HSP90AB3PQ58FF7 597 aa12.46□□□□□ -0.42
TRAPPC8-211ENST00000582539 BMP2KLQ5H9B9 411 aa12.46□□□□□ -0.42
TRAPPC8-211ENST00000582539 SLC4A10Q6U841 1118 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms