RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
GGA3-212ENST00000582376 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
GGA3-212ENST00000582376 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
GGA3-212ENST00000582376 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
GGA3-212ENST00000582376 C16orf71Q8IYS4 520 aaPredicted RBP13.46□□□□□ -0.25
GGA3-212ENST00000582376 FLAD1Q8NFF5 587 aa13.46□□□□□ -0.25
GGA3-212ENST00000582376 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.26
GGA3-212ENST00000582376 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
GGA3-212ENST00000582376 CENPJQ9HC77 1338 aaPredicted RBP13.45□□□□□ -0.26
GGA3-212ENST00000582376 FSTL1Q12841 308 aa13.45□□□□□ -0.26
GGA3-212ENST00000582376 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
GGA3-212ENST00000582376 NSD2O96028 1365 aa13.45□□□□□ -0.26
GGA3-212ENST00000582376 ANKRD24Q8TF21 1146 aa13.44□□□□□ -0.26
GGA3-212ENST00000582376 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
GGA3-212ENST00000582376 USP47Q96K76 1375 aa13.43□□□□□ -0.26
GGA3-212ENST00000582376 DOT1LQ8TEK3 1739 aa13.42□□□□□ -0.26
GGA3-212ENST00000582376 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
GGA3-212ENST00000582376 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
GGA3-212ENST00000582376 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
GGA3-212ENST00000582376 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
GGA3-212ENST00000582376 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
GGA3-212ENST00000582376 C5P01031 1676 aa13.39□□□□□ -0.27
GGA3-212ENST00000582376 BCS1LQ9Y276 419 aa13.38□□□□□ -0.27
GGA3-212ENST00000582376 EVC2Q86UK5 1308 aa13.38□□□□□ -0.27
GGA3-212ENST00000582376 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
GGA3-212ENST00000582376 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
GGA3-212ENST00000582376 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
GGA3-212ENST00000582376 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
GGA3-212ENST00000582376 PLEKHG2Q9H7P9 1386 aa13.36□□□□□ -0.27
GGA3-212ENST00000582376 LTN1O94822 1766 aa13.36□□□□□ -0.27
GGA3-212ENST00000582376 SMC1BQ8NDV3 1235 aa13.36□□□□□ -0.27
GGA3-212ENST00000582376 ZCRB1Q8TBF4 217 aaKnown RBP13.36□□□□□ -0.27
GGA3-212ENST00000582376 AK7Q96M32 723 aa13.36□□□□□ -0.27
GGA3-212ENST00000582376 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
GGA3-212ENST00000582376 PHF14O94880 888 aa13.35□□□□□ -0.27
GGA3-212ENST00000582376 C9orf131Q5VYM1 1079 aa13.35□□□□□ -0.27
GGA3-212ENST00000582376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
GGA3-212ENST00000582376 NSD3Q9BZ95 1437 aa13.35□□□□□ -0.27
GGA3-212ENST00000582376 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
GGA3-212ENST00000582376 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
GGA3-212ENST00000582376 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
GGA3-212ENST00000582376 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
GGA3-212ENST00000582376 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
GGA3-212ENST00000582376 PALLDQ8WX93 1383 aa13.33□□□□□ -0.27
GGA3-212ENST00000582376 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
GGA3-212ENST00000582376 TGFB2P61812 414 aa13.33□□□□□ -0.28
GGA3-212ENST00000582376 AMIGO3Q86WK7 504 aa13.33□□□□□ -0.28
GGA3-212ENST00000582376 TAF1LQ8IZX4 1826 aa13.33□□□□□ -0.28
GGA3-212ENST00000582376 C4BP0C0L5 1744 aa13.33□□□□□ -0.28
GGA3-212ENST00000582376 FAM208AQ9UK61 1670 aaKnown RBP13.32□□□□□ -0.28
GGA3-212ENST00000582376 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
GGA3-212ENST00000582376 NME9Q86XW9 330 aa13.32□□□□□ -0.28
GGA3-212ENST00000582376 IP6K1Q92551 441 aa13.32□□□□□ -0.28
GGA3-212ENST00000582376 A0A0G2JLW4 131 aa13.31□□□□□ -0.28
GGA3-212ENST00000582376 FCHSD2O94868 740 aa13.31□□□□□ -0.28
GGA3-212ENST00000582376 SSFA2P28290 1259 aa13.31□□□□□ -0.28
GGA3-212ENST00000582376 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
GGA3-212ENST00000582376 MMP10P09238 476 aa13.3□□□□□ -0.28
GGA3-212ENST00000582376 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
GGA3-212ENST00000582376 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
GGA3-212ENST00000582376 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
GGA3-212ENST00000582376 MON2Q7Z3U7 1717 aa13.29□□□□□ -0.28
GGA3-212ENST00000582376 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
GGA3-212ENST00000582376 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
GGA3-212ENST00000582376 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
GGA3-212ENST00000582376 MEGF6O75095 1541 aa13.29□□□□□ -0.28
GGA3-212ENST00000582376 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
GGA3-212ENST00000582376 PKD1L3Q7Z443 1732 aa13.28□□□□□ -0.28
GGA3-212ENST00000582376 DPEP1P16444 411 aa13.28□□□□□ -0.28
GGA3-212ENST00000582376 RNF181Q9P0P0 153 aa13.28□□□□□ -0.28
GGA3-212ENST00000582376 FAM161AQ3B820 660 aa13.27□□□□□ -0.29
GGA3-212ENST00000582376 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
GGA3-212ENST00000582376 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
GGA3-212ENST00000582376 SBNO2Q9Y2G9 1366 aa13.26□□□□□ -0.29
GGA3-212ENST00000582376 PRDM10Q9NQV6 1147 aa13.25□□□□□ -0.29
GGA3-212ENST00000582376 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
GGA3-212ENST00000582376 GNPATO15228 680 aa13.24□□□□□ -0.29
GGA3-212ENST00000582376 LINC00116Q8NCU8 138 aa13.24□□□□□ -0.29
GGA3-212ENST00000582376 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
GGA3-212ENST00000582376 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
GGA3-212ENST00000582376 FOXN1O15353 648 aa13.23□□□□□ -0.29
GGA3-212ENST00000582376 HOXC9P31274 260 aa13.23□□□□□ -0.29
GGA3-212ENST00000582376 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
GGA3-212ENST00000582376 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
GGA3-212ENST00000582376 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
GGA3-212ENST00000582376 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
GGA3-212ENST00000582376 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
GGA3-212ENST00000582376 VEGFAP15692 232 aaPredicted RBP13.22□□□□□ -0.29
GGA3-212ENST00000582376 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
GGA3-212ENST00000582376 AMPHP49418 695 aa13.22□□□□□ -0.29
GGA3-212ENST00000582376 SIK1P57059 783 aa13.22□□□□□ -0.29
GGA3-212ENST00000582376 TMF1P82094 1093 aa13.22□□□□□ -0.29
GGA3-212ENST00000582376 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
GGA3-212ENST00000582376 PIM2Q9P1W9 311 aa13.22□□□□□ -0.29
GGA3-212ENST00000582376 BRCA1P38398 1863 aaKnown RBP13.22□□□□□ -0.29
GGA3-212ENST00000582376 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
GGA3-212ENST00000582376 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
GGA3-212ENST00000582376 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.29
GGA3-212ENST00000582376 KCNA3P22001 575 aa13.21□□□□□ -0.29
GGA3-212ENST00000582376 DALRD3Q5D0E6 543 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms