RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CCNL1Q9UK58 526 aaPredicted RBP20.01■□□□□ 0.79
CSNK1D-219ENST00000581660 FAM208AQ9UK61 1670 aaKnown RBP20■□□□□ 0.79
CSNK1D-219ENST00000581660 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
CSNK1D-219ENST00000581660 MSH5O43196 834 aa19.98■□□□□ 0.79
CSNK1D-219ENST00000581660 DNAJC5GQ8N7S2 189 aa19.98■□□□□ 0.79
CSNK1D-219ENST00000581660 SYTL4Q96C24 671 aaPredicted RBP19.98■□□□□ 0.79
CSNK1D-219ENST00000581660 SBNO2Q9Y2G9 1366 aa19.96■□□□□ 0.79
CSNK1D-219ENST00000581660 CICQ96RK0 1608 aaPredicted RBP19.96■□□□□ 0.79
CSNK1D-219ENST00000581660 C5P01031 1676 aa19.95■□□□□ 0.78
CSNK1D-219ENST00000581660 NME9Q86XW9 330 aa19.95■□□□□ 0.78
CSNK1D-219ENST00000581660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.95■□□□□ 0.78
CSNK1D-219ENST00000581660 CD163L1Q9NR16 1453 aa19.94■□□□□ 0.78
CSNK1D-219ENST00000581660 FLAD1Q8NFF5 587 aa19.94■□□□□ 0.78
CSNK1D-219ENST00000581660 USP47Q96K76 1375 aa19.93■□□□□ 0.78
CSNK1D-219ENST00000581660 HMGB2P26583 209 aaKnown RBP19.92■□□□□ 0.78
CSNK1D-219ENST00000581660 IP6K1Q92551 441 aa19.92■□□□□ 0.78
CSNK1D-219ENST00000581660 IGSF1Q8N6C5 1336 aa19.92■□□□□ 0.78
CSNK1D-219ENST00000581660 TOMM70O94826 608 aa19.9■□□□□ 0.78
CSNK1D-219ENST00000581660 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
CSNK1D-219ENST00000581660 MEGF6O75095 1541 aa19.89■□□□□ 0.77
CSNK1D-219ENST00000581660 ZCRB1Q8TBF4 217 aaKnown RBP19.89■□□□□ 0.77
CSNK1D-219ENST00000581660 EDC4Q6P2E9 1401 aaKnown RBP19.88■□□□□ 0.77
CSNK1D-219ENST00000581660 TOGARAM1Q9Y4F4 1720 aa19.87■□□□□ 0.77
CSNK1D-219ENST00000581660 WDR90Q96KV7 1748 aa19.86■□□□□ 0.77
CSNK1D-219ENST00000581660 COL13A1Q5TAT6 717 aaPredicted RBP19.85■□□□□ 0.77
CSNK1D-219ENST00000581660 JMYQ8N9B5 988 aa19.85■□□□□ 0.77
CSNK1D-219ENST00000581660 LTV1Q96GA3 475 aaPredicted RBP19.85■□□□□ 0.77
CSNK1D-219ENST00000581660 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
CSNK1D-219ENST00000581660 PALLDQ8WX93 1383 aa19.83■□□□□ 0.77
CSNK1D-219ENST00000581660 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.77
CSNK1D-219ENST00000581660 UBR3Q6ZT12 1888 aa19.83■□□□□ 0.76
CSNK1D-219ENST00000581660 NSD3Q9BZ95 1437 aa19.83■□□□□ 0.76
CSNK1D-219ENST00000581660 ROCK2O75116 1388 aaKnown RBP19.83■□□□□ 0.76
CSNK1D-219ENST00000581660 PCNTO95613 3336 aa19.82■□□□□ 0.76
CSNK1D-219ENST00000581660 HDGFL2Q7Z4V5 671 aaPredicted RBP19.82■□□□□ 0.76
CSNK1D-219ENST00000581660 AMIGO3Q86WK7 504 aa19.82■□□□□ 0.76
CSNK1D-219ENST00000581660 WWC3Q9ULE0 1092 aa19.82■□□□□ 0.76
CSNK1D-219ENST00000581660 RGPD2P0DJD1 1756 aa19.82■□□□□ 0.76
CSNK1D-219ENST00000581660 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
CSNK1D-219ENST00000581660 KLRG1Q96E93 195 aa19.81■□□□□ 0.76
CSNK1D-219ENST00000581660 MAP3K19Q56UN5 1328 aa19.8■□□□□ 0.76
CSNK1D-219ENST00000581660 HOXC9P31274 260 aa19.8■□□□□ 0.76
CSNK1D-219ENST00000581660 PRELPP51888 382 aa19.8■□□□□ 0.76
CSNK1D-219ENST00000581660 RBM46Q8TBY0 533 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-219ENST00000581660 A0A1W2PP64 1363 aa19.8■□□□□ 0.76
CSNK1D-219ENST00000581660 KIF13BQ9NQT8 1826 aa19.79■□□□□ 0.76
CSNK1D-219ENST00000581660 AK7Q96M32 723 aa19.79■□□□□ 0.76
CSNK1D-219ENST00000581660 KIAA1551Q9HCM1 1747 aa19.79■□□□□ 0.76
CSNK1D-219ENST00000581660 PXDNLA1KZ92 1463 aa19.79■□□□□ 0.76
CSNK1D-219ENST00000581660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
CSNK1D-219ENST00000581660 SLC12A5Q9H2X9 1139 aa19.78■□□□□ 0.76
CSNK1D-219ENST00000581660 NMRK2Q9NPI5 230 aa19.78■□□□□ 0.76
CSNK1D-219ENST00000581660 SSFA2P28290 1259 aa19.77■□□□□ 0.76
CSNK1D-219ENST00000581660 TMC1Q8TDI8 760 aa19.77■□□□□ 0.76
CSNK1D-219ENST00000581660 TERF2IPQ9NYB0 399 aa19.77■□□□□ 0.76
CSNK1D-219ENST00000581660 RTL1A6NKG5 1358 aa19.77■□□□□ 0.76
CSNK1D-219ENST00000581660 TNS4Q8IZW8 715 aa19.76■□□□□ 0.75
CSNK1D-219ENST00000581660 CAPN15O75808 1086 aa19.75■□□□□ 0.75
CSNK1D-219ENST00000581660 SMARCC1Q92922 1105 aaPredicted RBP19.75■□□□□ 0.75
CSNK1D-219ENST00000581660 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
CSNK1D-219ENST00000581660 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
CSNK1D-219ENST00000581660 PHF14O94880 888 aa19.74■□□□□ 0.75
CSNK1D-219ENST00000581660 AMPHP49418 695 aa19.74■□□□□ 0.75
CSNK1D-219ENST00000581660 FSTL1Q12841 308 aa19.74■□□□□ 0.75
CSNK1D-219ENST00000581660 NBPF6Q5VWK0 638 aa19.74■□□□□ 0.75
CSNK1D-219ENST00000581660 NBPF4Q96M43 638 aa19.74■□□□□ 0.75
CSNK1D-219ENST00000581660 MAP2P11137 1827 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-219ENST00000581660 RAPGEF4Q8WZA2 1011 aa19.73■□□□□ 0.75
CSNK1D-219ENST00000581660 ITGB4P16144 1822 aa19.72■□□□□ 0.75
CSNK1D-219ENST00000581660 TGFB2P61812 414 aa19.72■□□□□ 0.75
CSNK1D-219ENST00000581660 HTRA3P83110 453 aa19.72■□□□□ 0.75
CSNK1D-219ENST00000581660 MPRIPQ6WCQ1 1025 aa19.72■□□□□ 0.75
CSNK1D-219ENST00000581660 C10orf71Q711Q0 1435 aa19.72■□□□□ 0.75
CSNK1D-219ENST00000581660 SMIM5Q71RC9 77 aa19.72■□□□□ 0.75
CSNK1D-219ENST00000581660 PUS7Q96PZ0 661 aaKnown RBP19.72■□□□□ 0.75
CSNK1D-219ENST00000581660 PLEKHG2Q9H7P9 1386 aa19.71■□□□□ 0.75
CSNK1D-219ENST00000581660 COG3Q96JB2 828 aa19.71■□□□□ 0.75
CSNK1D-219ENST00000581660 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
CSNK1D-219ENST00000581660 N4BP2Q86UW6 1770 aaPredicted RBP19.7■□□□□ 0.74
CSNK1D-219ENST00000581660 SMG6Q86US8 1419 aaKnown RBP19.69■□□□□ 0.74
CSNK1D-219ENST00000581660 CYP27B1O15528 508 aa19.69■□□□□ 0.74
CSNK1D-219ENST00000581660 MMP10P09238 476 aa19.69■□□□□ 0.74
CSNK1D-219ENST00000581660 USHBP1Q8N6Y0 703 aa19.69■□□□□ 0.74
CSNK1D-219ENST00000581660 BCS1LQ9Y276 419 aa19.69■□□□□ 0.74
CSNK1D-219ENST00000581660 BRCA1P38398 1863 aaKnown RBP19.69■□□□□ 0.74
CSNK1D-219ENST00000581660 FBLN1P23142 703 aa19.68■□□□□ 0.74
CSNK1D-219ENST00000581660 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
CSNK1D-219ENST00000581660 LINC00116Q8NCU8 138 aa19.68■□□□□ 0.74
CSNK1D-219ENST00000581660 ARHGAP27Q6ZUM4 889 aa19.67■□□□□ 0.74
CSNK1D-219ENST00000581660 PIGBQ92521 554 aa19.67■□□□□ 0.74
CSNK1D-219ENST00000581660 PKD1L3Q7Z443 1732 aa19.66■□□□□ 0.74
CSNK1D-219ENST00000581660 LOC102724428A0A0B4J2F2 783 aa19.66■□□□□ 0.74
CSNK1D-219ENST00000581660 SIK1P57059 783 aa19.66■□□□□ 0.74
CSNK1D-219ENST00000581660 A0A0G2JLW4 131 aa19.65■□□□□ 0.74
CSNK1D-219ENST00000581660 C9orf131Q5VYM1 1079 aa19.65■□□□□ 0.74
CSNK1D-219ENST00000581660 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
CSNK1D-219ENST00000581660 GNPATO15228 680 aa19.64■□□□□ 0.73
CSNK1D-219ENST00000581660 NKX1-1Q15270 411 aaPredicted RBP19.64■□□□□ 0.73
CSNK1D-219ENST00000581660 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.73
CSNK1D-219ENST00000581660 TNRC6CQ9HCJ0 1690 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms