RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 SPG7Q9UQ90 795 aa24.4■■□□□ 1.5
TOP2A-205ENST00000581055 APBA3O96018 575 aa24.39■■□□□ 1.49
TOP2A-205ENST00000581055 BCL11BQ9C0K0 894 aaPredicted RBP24.39■■□□□ 1.49
TOP2A-205ENST00000581055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.39■■□□□ 1.494e-14■■■□□ 18
TOP2A-205ENST00000581055 PLEKHG2Q9H7P9 1386 aa24.39■■□□□ 1.49
TOP2A-205ENST00000581055 PCDH11XQ9BZA7 1347 aa24.38■■□□□ 1.49
TOP2A-205ENST00000581055 PCDH11YQ9BZA8 1340 aa24.38■■□□□ 1.49
TOP2A-205ENST00000581055 RALBP1Q15311 655 aa24.38■■□□□ 1.49
TOP2A-205ENST00000581055 DEFB132Q7Z7B7 95 aa24.38■■□□□ 1.49
TOP2A-205ENST00000581055 PARD3Q8TEW0 1356 aa24.38■■□□□ 1.49
TOP2A-205ENST00000581055 SULT6B1Q6IMI4 303 aa24.37■■□□□ 1.49
TOP2A-205ENST00000581055 RGPD2P0DJD1 1756 aa24.36■■□□□ 1.49
TOP2A-205ENST00000581055 EN1Q05925 392 aaPredicted RBP24.33■■□□□ 1.49
TOP2A-205ENST00000581055 AMOTQ4VCS5 1084 aa24.33■■□□□ 1.49
TOP2A-205ENST00000581055 PLEKHO1Q53GL0 409 aaPredicted RBP24.33■■□□□ 1.49
TOP2A-205ENST00000581055 AEBP1Q8IUX7 1158 aa24.33■■□□□ 1.49
TOP2A-205ENST00000581055 NUDCQ9Y266 331 aa24.33■■□□□ 1.49
TOP2A-205ENST00000581055 KDRP35968 1356 aa24.32■■□□□ 1.48
TOP2A-205ENST00000581055 ACSBG1Q96GR2 724 aa24.32■■□□□ 1.48
TOP2A-205ENST00000581055 RGPD1P0DJD0 1748 aa24.32■■□□□ 1.48
TOP2A-205ENST00000581055 U2SURPO15042 1029 aaKnown RBP24.31■■□□□ 1.48
TOP2A-205ENST00000581055 CYP27B1O15528 508 aa24.31■■□□□ 1.48
TOP2A-205ENST00000581055 KCNQ2O43526 872 aa24.3■■□□□ 1.48
TOP2A-205ENST00000581055 COL3A1P02461 1466 aaPredicted RBP24.3■■□□□ 1.48
TOP2A-205ENST00000581055 IFNL2Q8IZJ0 200 aa24.29■■□□□ 1.48
TOP2A-205ENST00000581055 CAMKK2Q96RR4 588 aa24.29■■□□□ 1.48
TOP2A-205ENST00000581055 PLSCR1O15162 318 aa24.28■■□□□ 1.48
TOP2A-205ENST00000581055 HMOX1P09601 288 aa24.28■■□□□ 1.48
TOP2A-205ENST00000581055 PTF1AQ7RTS3 328 aa24.28■■□□□ 1.48
TOP2A-205ENST00000581055 PRIM1P49642 420 aaKnown RBP24.27■■□□□ 1.48
TOP2A-205ENST00000581055 NKX1-1Q15270 411 aaPredicted RBP24.27■■□□□ 1.48
TOP2A-205ENST00000581055 SYTL4Q96C24 671 aaPredicted RBP24.27■■□□□ 1.48
TOP2A-205ENST00000581055 PHKG2P15735 406 aa24.26■■□□□ 1.47
TOP2A-205ENST00000581055 EZH2Q15910 746 aaKnown RBP24.26■■□□□ 1.47
TOP2A-205ENST00000581055 HSP90AB1P08238 724 aaKnown RBP24.25■■□□□ 1.47
TOP2A-205ENST00000581055 ZNF530Q6P9A1 599 aaPredicted RBP24.25■■□□□ 1.47
TOP2A-205ENST00000581055 MYBBP1AQ9BQG0 1328 aaKnown RBP24.25■■□□□ 1.47
TOP2A-205ENST00000581055 C1orf141Q5JVX7 400 aa24.24■■□□□ 1.47
TOP2A-205ENST00000581055 TNS1Q9HBL0 1735 aaKnown RBP24.24■■□□□ 1.47
TOP2A-205ENST00000581055 U2AF1L5P0DN76 240 aaPredicted RBP24.22■■□□□ 1.47
TOP2A-205ENST00000581055 U2AF1Q01081 240 aaKnown RBP eCLIP24.22■■□□□ 1.47
TOP2A-205ENST00000581055 PRKRIP1Q9H875 184 aaPredicted RBP24.22■■□□□ 1.47
TOP2A-205ENST00000581055 PKD1L3Q7Z443 1732 aa24.21■■□□□ 1.47
TOP2A-205ENST00000581055 DCAF5Q96JK2 942 aa24.2■■□□□ 1.46
TOP2A-205ENST00000581055 NHSQ6T4R5 1651 aa24.2■■□□□ 1.46
TOP2A-205ENST00000581055 SHANK3Q9BYB0 1731 aa24.19■■□□□ 1.46
TOP2A-205ENST00000581055 FCHSD2O94868 740 aa24.18■■□□□ 1.46
TOP2A-205ENST00000581055 MPRIPQ6WCQ1 1025 aa24.18■■□□□ 1.46
TOP2A-205ENST00000581055 AKAP4Q5JQC9 854 aa24.17■■□□□ 1.46
TOP2A-205ENST00000581055 SBF2Q86WG5 1849 aa24.17■■□□□ 1.46
TOP2A-205ENST00000581055 TXNRD1Q16881 649 aa24.16■■□□□ 1.46
TOP2A-205ENST00000581055 NBPF14Q5TI25 921 aa24.16■■□□□ 1.46
TOP2A-205ENST00000581055 RSPH6AQ9H0K4 717 aa24.16■■□□□ 1.46
TOP2A-205ENST00000581055 ERVV-2B6SEH9 535 aa24.15■■□□□ 1.46
TOP2A-205ENST00000581055 PRKAR2BP31323 418 aa24.15■■□□□ 1.46
TOP2A-205ENST00000581055 MTHFSDQ2M296 383 aaKnown RBP24.15■■□□□ 1.46
TOP2A-205ENST00000581055 GAS2L2Q8NHY3 880 aa24.15■■□□□ 1.46
TOP2A-205ENST00000581055 TMOD3Q9NYL9 352 aa24.15■■□□□ 1.46
TOP2A-205ENST00000581055 PROM2Q8N271 834 aa24.14■■□□□ 1.45
TOP2A-205ENST00000581055 PIGBQ92521 554 aa24.13■■□□□ 1.45
TOP2A-205ENST00000581055 PNNQ9H307 717 aaKnown RBP24.13■■□□□ 1.45
TOP2A-205ENST00000581055 NEFMP07197 916 aa24.12■■□□□ 1.45
TOP2A-205ENST00000581055 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
TOP2A-205ENST00000581055 SMARCC1Q92922 1105 aaPredicted RBP24.12■■□□□ 1.45
TOP2A-205ENST00000581055 DOT1LQ8TEK3 1739 aa24.11■■□□□ 1.45
TOP2A-205ENST00000581055 ANP32CO43423 234 aa24.11■■□□□ 1.45
TOP2A-205ENST00000581055 CABP4P57796 275 aa24.11■■□□□ 1.45
TOP2A-205ENST00000581055 HMGB2P26583 209 aaKnown RBP24.1■■□□□ 1.45
TOP2A-205ENST00000581055 RGPD3A6NKT7 1758 aaPredicted RBP24.1■■□□□ 1.45
TOP2A-205ENST00000581055 RGPD4Q7Z3J3 1758 aa24.1■■□□□ 1.45
TOP2A-205ENST00000581055 PHACTR3Q96KR7 559 aa24.09■■□□□ 1.45
TOP2A-205ENST00000581055 KDM6AO15550 1401 aaPredicted RBP24.08■■□□□ 1.44
TOP2A-205ENST00000581055 GNAT3A8MTJ3 354 aa24.07■■□□□ 1.44
TOP2A-205ENST00000581055 PALLDQ8WX93 1383 aa24.06■■□□□ 1.44
TOP2A-205ENST00000581055 BTAF1O14981 1849 aa24.06■■□□□ 1.44
TOP2A-205ENST00000581055 R3HDM1Q15032 1099 aaKnown RBP24.06■■□□□ 1.44
TOP2A-205ENST00000581055 WDR43Q15061 677 aaKnown RBP eCLIP24.06■■□□□ 1.44
TOP2A-205ENST00000581055 CCNL1Q9UK58 526 aaPredicted RBP24.06■■□□□ 1.44
TOP2A-205ENST00000581055 MAP3K5Q99683 1374 aa24.05■■□□□ 1.44
TOP2A-205ENST00000581055 RNMTO43148 476 aaKnown RBP24.05■■□□□ 1.44
TOP2A-205ENST00000581055 STK32BQ9NY57 414 aa24.05■■□□□ 1.44
TOP2A-205ENST00000581055 PSDA5PKW4 1024 aaPredicted RBP24.04■■□□□ 1.44
TOP2A-205ENST00000581055 NFATC2IPQ8NCF5 419 aa24.04■■□□□ 1.44
TOP2A-205ENST00000581055 RREB1Q92766 1687 aa24.04■■□□□ 1.44
TOP2A-205ENST00000581055 SLC52A2Q9HAB3 445 aa24.03■■□□□ 1.44
TOP2A-205ENST00000581055 LGR6Q9HBX8 967 aa24.03■■□□□ 1.44
TOP2A-205ENST00000581055 LRRC4BQ9NT99 713 aa24.03■■□□□ 1.44
TOP2A-205ENST00000581055 ASAP1Q9ULH1 1129 aa24.03■■□□□ 1.44
TOP2A-205ENST00000581055 MAPK8IP3Q9UPT6 1336 aa24.03■■□□□ 1.44
TOP2A-205ENST00000581055 TOGARAM1Q9Y4F4 1720 aa24.02■■□□□ 1.44
TOP2A-205ENST00000581055 ATG3Q9NT62 314 aa24.02■■□□□ 1.44
TOP2A-205ENST00000581055 RTF1Q92541 710 aaKnown RBP24.01■■□□□ 1.43
TOP2A-205ENST00000581055 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
TOP2A-205ENST00000581055 KAT6BQ8WYB5 2073 aa24.01■■□□□ 1.43
TOP2A-205ENST00000581055 SLC15A2Q16348 729 aa24■■□□□ 1.43
TOP2A-205ENST00000581055 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
TOP2A-205ENST00000581055 NUP188Q5SRE5 1749 aa23.99■■□□□ 1.43
TOP2A-205ENST00000581055 LOC102724428A0A0B4J2F2 783 aa23.99■■□□□ 1.43
TOP2A-205ENST00000581055 HTATSF1O43719 755 aaKnown RBP23.99■■□□□ 1.43
TOP2A-205ENST00000581055 SIK1P57059 783 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms