RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
GAPLINC-203ENST00000581029 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 HSP90AB1P08238 724 aaKnown RBP11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 TMPOP42166 694 aaKnown RBP11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 NFE2L2Q16236 605 aa11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 RTF1Q92541 710 aaKnown RBP11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 YTHDC1Q96MU7 727 aaKnown RBP11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 PLCH1Q4KWH8 1693 aa11.97□□□□□ -0.49
GAPLINC-203ENST00000581029 IL2RBP14784 551 aa11.96□□□□□ -0.49
GAPLINC-203ENST00000581029 RIPK4P57078 832 aa11.96□□□□□ -0.49
GAPLINC-203ENST00000581029 WDR63Q8IWG1 891 aa11.96□□□□□ -0.49
GAPLINC-203ENST00000581029 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
GAPLINC-203ENST00000581029 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.95□□□□□ -0.5
GAPLINC-203ENST00000581029 VPS72Q15906 364 aa11.95□□□□□ -0.5
GAPLINC-203ENST00000581029 C1orf141Q5JVX7 400 aa11.95□□□□□ -0.5
GAPLINC-203ENST00000581029 USP21Q9UK80 565 aa11.95□□□□□ -0.5
GAPLINC-203ENST00000581029 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 IL16Q14005 1332 aa11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 LARP1Q6PKG0 1096 aaKnown RBP11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 AEBP1Q8IUX7 1158 aa11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 TRPC5Q9UL62 973 aaPredicted RBP11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 NRAPQ86VF7 1730 aa11.94□□□□□ -0.5
GAPLINC-203ENST00000581029 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
GAPLINC-203ENST00000581029 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
GAPLINC-203ENST00000581029 IFNL2Q8IZJ0 200 aa11.93□□□□□ -0.5
GAPLINC-203ENST00000581029 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
GAPLINC-203ENST00000581029 LRP6O75581 1613 aa11.93□□□□□ -0.5
GAPLINC-203ENST00000581029 SPATA31A1Q5TZJ5 1347 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 SPATA31A5Q5VU36 1347 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 SPATA31A7Q8IWB4 1347 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 E9PSI1 815 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 WWC1Q8IX03 1113 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 USHBP1Q8N6Y0 703 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 PHACTR3Q96KR7 559 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
GAPLINC-203ENST00000581029 MTHFSDQ2M296 383 aaKnown RBP11.91□□□□□ -0.5
GAPLINC-203ENST00000581029 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
GAPLINC-203ENST00000581029 AFF2P51816 1311 aa11.9□□□□□ -0.5
GAPLINC-203ENST00000581029 BCL9LQ86UU0 1499 aa11.9□□□□□ -0.5
GAPLINC-203ENST00000581029 EXOC5O00471 708 aa11.9□□□□□ -0.5
GAPLINC-203ENST00000581029 GNAI1P63096 354 aa11.9□□□□□ -0.5
GAPLINC-203ENST00000581029 ZNF530Q6P9A1 599 aaPredicted RBP11.9□□□□□ -0.5
GAPLINC-203ENST00000581029 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.5
GAPLINC-203ENST00000581029 ZNF521Q96K83 1311 aa11.89□□□□□ -0.51
GAPLINC-203ENST00000581029 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
GAPLINC-203ENST00000581029 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
GAPLINC-203ENST00000581029 DDB1Q16531 1140 aa11.88□□□□□ -0.51
GAPLINC-203ENST00000581029 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
GAPLINC-203ENST00000581029 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
GAPLINC-203ENST00000581029 IFT57Q9NWB7 429 aa11.88□□□□□ -0.51
GAPLINC-203ENST00000581029 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
GAPLINC-203ENST00000581029 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
GAPLINC-203ENST00000581029 SALL2Q9Y467 1007 aaPredicted RBP11.88□□□□□ -0.51
GAPLINC-203ENST00000581029 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
GAPLINC-203ENST00000581029 MEGF6O75095 1541 aa11.87□□□□□ -0.51
GAPLINC-203ENST00000581029 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
GAPLINC-203ENST00000581029 PHKG2P15735 406 aa11.87□□□□□ -0.51
GAPLINC-203ENST00000581029 TEFQ10587 303 aa11.87□□□□□ -0.51
GAPLINC-203ENST00000581029 ATRNO75882 1429 aa11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 QTRT2Q9H974 415 aaKnown RBP11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 WNK3Q9BYP7 1800 aa11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
GAPLINC-203ENST00000581029 ERVV-2B6SEH9 535 aa11.85□□□□□ -0.51
GAPLINC-203ENST00000581029 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
GAPLINC-203ENST00000581029 RBM6P78332 1123 aaKnown RBP11.85□□□□□ -0.51
GAPLINC-203ENST00000581029 SLFN5Q08AF3 891 aa11.85□□□□□ -0.51
GAPLINC-203ENST00000581029 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
GAPLINC-203ENST00000581029 CEMIPQ8WUJ3 1361 aa11.84□□□□□ -0.51
GAPLINC-203ENST00000581029 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
GAPLINC-203ENST00000581029 TAF7Q15545 349 aaPredicted RBP11.84□□□□□ -0.51
GAPLINC-203ENST00000581029 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
GAPLINC-203ENST00000581029 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
GAPLINC-203ENST00000581029 A0A0G2JS52 829 aa11.82□□□□□ -0.52
GAPLINC-203ENST00000581029 MYT1Q01538 1121 aa11.82□□□□□ -0.52
GAPLINC-203ENST00000581029 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
GAPLINC-203ENST00000581029 DDX54Q8TDD1 881 aaKnown RBP11.82□□□□□ -0.52
GAPLINC-203ENST00000581029 CHL1O00533 1208 aa11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 CYP27B1O15528 508 aa11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 CABP4P57796 275 aa11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 MCM10Q7L590 875 aa11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
GAPLINC-203ENST00000581029 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms