RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-205ENST00000580034 DEPDC5O75140 1603 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 SAMD9LQ8IVG5 1584 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 NUTM2FA1L443 756 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 IRS1P35568 1242 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 GCGRP47871 477 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 SCARF1Q14162 830 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 GGT6Q6P531 493 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 ANKLE2Q86XL3 938 aa7.56□□□□□ -1.2
RTTN-205ENST00000580034 XIRP1Q702N8 1843 aaKnown RBP7.56□□□□□ -1.2
RTTN-205ENST00000580034 PLXNC1O60486 1568 aa7.55□□□□□ -1.2
RTTN-205ENST00000580034 KRTAP9-6A0A140TA67 174 aa7.55□□□□□ -1.2
RTTN-205ENST00000580034 DDX11L8A8MPP1 907 aa7.55□□□□□ -1.2
RTTN-205ENST00000580034 DXOO77932 396 aaKnown RBP7.55□□□□□ -1.2
RTTN-205ENST00000580034 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
RTTN-205ENST00000580034 DAXXQ9UER7 740 aaPredicted RBP7.55□□□□□ -1.2
RTTN-205ENST00000580034 UGGT1Q9NYU2 1555 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 ATP7AQ04656 1500 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 SYCP2Q9BX26 1530 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 FAM135AQ9P2D6 1515 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 ADAM23O75077 832 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 METTL3Q86U44 580 aaKnown RBP7.54□□□□□ -1.2
RTTN-205ENST00000580034 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 PURBQ96QR8 312 aaKnown RBP7.54□□□□□ -1.2
RTTN-205ENST00000580034 CDK11AQ9UQ88 783 aaPredicted RBP7.54□□□□□ -1.2
RTTN-205ENST00000580034 PHLPP1O60346 1717 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 CDC42BPAQ5VT25 1732 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 TNRQ92752 1358 aa7.54□□□□□ -1.2
RTTN-205ENST00000580034 TROQ12816 1431 aaPredicted RBP7.53□□□□□ -1.2
RTTN-205ENST00000580034 PPFIA3O75145 1194 aa7.53□□□□□ -1.2
RTTN-205ENST00000580034 Q3C1V9 767 aa7.53□□□□□ -1.2
RTTN-205ENST00000580034 MEX3CQ5U5Q3 659 aaKnown RBP7.53□□□□□ -1.2
RTTN-205ENST00000580034 MED14O60244 1454 aa7.53□□□□□ -1.2
RTTN-205ENST00000580034 A2MP01023 1474 aa7.53□□□□□ -1.2
RTTN-205ENST00000580034 ADGBQ8N7X0 1667 aa7.53□□□□□ -1.2
RTTN-205ENST00000580034 LRRIQ1Q96JM4 1722 aa7.52□□□□□ -1.2
RTTN-205ENST00000580034 ZC3H13Q5T200 1668 aaKnown RBP7.52□□□□□ -1.21
RTTN-205ENST00000580034 INO80Q9ULG1 1556 aaPredicted RBP7.52□□□□□ -1.21
RTTN-205ENST00000580034 GRIPAP1Q4V328 841 aa7.52□□□□□ -1.21
RTTN-205ENST00000580034 SPAG9O60271 1321 aaKnown RBP7.52□□□□□ -1.21
RTTN-205ENST00000580034 FCHSD2O94868 740 aa7.51□□□□□ -1.21
RTTN-205ENST00000580034 KRT76Q01546 638 aa7.51□□□□□ -1.21
RTTN-205ENST00000580034 KANK3Q6NY19 840 aa7.51□□□□□ -1.21
RTTN-205ENST00000580034 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
RTTN-205ENST00000580034 USB1Q9BQ65 265 aaKnown RBP7.51□□□□□ -1.21
RTTN-205ENST00000580034 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
RTTN-205ENST00000580034 ZNF777Q9ULD5 760 aaPredicted RBP7.51□□□□□ -1.21
RTTN-205ENST00000580034 FAM135BQ49AJ0 1406 aa7.51□□□□□ -1.21
RTTN-205ENST00000580034 ZNF772Q68DY9 489 aaPredicted RBP7.5□□□□□ -1.21
RTTN-205ENST00000580034 THEMISQ8N1K5 641 aaPredicted RBP7.5□□□□□ -1.21
RTTN-205ENST00000580034 PZPP20742 1482 aa7.49□□□□□ -1.21
RTTN-205ENST00000580034 NLRP1Q9C000 1473 aa7.49□□□□□ -1.21
RTTN-205ENST00000580034 KDM5DQ9BY66 1539 aa7.49□□□□□ -1.21
RTTN-205ENST00000580034 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
RTTN-205ENST00000580034 GPR161Q8N6U8 529 aaKnown RBP7.49□□□□□ -1.21
RTTN-205ENST00000580034 LRP6O75581 1613 aa7.49□□□□□ -1.21
RTTN-205ENST00000580034 JCADQ9P266 1359 aa7.48□□□□□ -1.21
RTTN-205ENST00000580034 MAN1A2O60476 641 aa7.48□□□□□ -1.21
RTTN-205ENST00000580034 ZNF385CQ66K41 422 aaPredicted RBP7.48□□□□□ -1.21
RTTN-205ENST00000580034 SETBP1Q9Y6X0 1596 aa7.48□□□□□ -1.21
RTTN-205ENST00000580034 LRRC9Q6ZRR7 1453 aa7.48□□□□□ -1.21
RTTN-205ENST00000580034 FMN1Q68DA7 1419 aa7.47□□□□□ -1.21
RTTN-205ENST00000580034 RXRBP28702 533 aa7.47□□□□□ -1.21
RTTN-205ENST00000580034 KRTAP1-3Q8IUG1 177 aa7.47□□□□□ -1.21
RTTN-205ENST00000580034 SULF1Q8IWU6 871 aa7.47□□□□□ -1.21
RTTN-205ENST00000580034 SVOPQ8N4V2 548 aa7.47□□□□□ -1.21
RTTN-205ENST00000580034 COL16A1Q07092 1604 aaPredicted RBP7.46□□□□□ -1.21
RTTN-205ENST00000580034 MARSP56192 900 aaKnown RBP7.46□□□□□ -1.22
RTTN-205ENST00000580034 CDK12Q9NYV4 1490 aaPredicted RBP7.46□□□□□ -1.22
RTTN-205ENST00000580034 SCAF11Q99590 1463 aaKnown RBP7.45□□□□□ -1.22
RTTN-205ENST00000580034 UBR1Q8IWV7 1749 aa7.45□□□□□ -1.22
RTTN-205ENST00000580034 NUTM2BA6NNL0 878 aaPredicted RBP7.45□□□□□ -1.22
RTTN-205ENST00000580034 NUTM2EB1AL46 878 aaPredicted RBP7.45□□□□□ -1.22
RTTN-205ENST00000580034 MSTNO14793 375 aa7.45□□□□□ -1.22
RTTN-205ENST00000580034 HNRNPMP52272 730 aaKnown RBP eCLIP7.45□□□□□ -1.22
RTTN-205ENST00000580034 NUTM2DQ5VT03 806 aaPredicted RBP7.45□□□□□ -1.22
RTTN-205ENST00000580034 NUTM2AQ8IVF1 878 aaPredicted RBP7.45□□□□□ -1.22
RTTN-205ENST00000580034 TMEM94Q12767 1356 aa7.45□□□□□ -1.22
RTTN-205ENST00000580034 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
RTTN-205ENST00000580034 MIA2Q96PC5 1412 aa7.44□□□□□ -1.22
RTTN-205ENST00000580034 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
RTTN-205ENST00000580034 ARHGEF15O94989 841 aa7.44□□□□□ -1.22
RTTN-205ENST00000580034 CFAP65Q6ZU64 1925 aaKnown RBP7.44□□□□□ -1.22
RTTN-205ENST00000580034 RGS12O14924 1447 aa7.44□□□□□ -1.22
RTTN-205ENST00000580034 TIMP2P16035 220 aa7.43□□□□□ -1.22
RTTN-205ENST00000580034 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
RTTN-205ENST00000580034 NNTQ13423 1086 aa7.43□□□□□ -1.22
RTTN-205ENST00000580034 PTCRAQ6ISU1 281 aaPredicted RBP7.43□□□□□ -1.22
RTTN-205ENST00000580034 NLRP7Q8WX94 980 aa7.43□□□□□ -1.22
RTTN-205ENST00000580034 SCARF2Q96GP6 870 aaPredicted RBP7.43□□□□□ -1.22
RTTN-205ENST00000580034 SPATA31A6Q5VVP1 1343 aa7.43□□□□□ -1.22
RTTN-205ENST00000580034 WASHC2CQ9Y4E1 1318 aa7.43□□□□□ -1.22
RTTN-205ENST00000580034 TIAM1Q13009 1591 aa7.42□□□□□ -1.22
RTTN-205ENST00000580034 SH3BP2P78314 561 aa7.42□□□□□ -1.22
RTTN-205ENST00000580034 WHAMMQ8TF30 809 aa7.42□□□□□ -1.22
RTTN-205ENST00000580034 COL25A1Q9BXS0 654 aaPredicted RBP7.42□□□□□ -1.22
RTTN-205ENST00000580034 PLEKHH2Q8IVE3 1493 aa7.42□□□□□ -1.22
RTTN-205ENST00000580034 PLEKHG3A1L390 1219 aa7.41□□□□□ -1.22
RTTN-205ENST00000580034 KIF3BO15066 747 aa7.41□□□□□ -1.22
RTTN-205ENST00000580034 Q8N3U1 123 aa7.41□□□□□ -1.22
RTTN-205ENST00000580034 MSH6P52701 1360 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms