RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-213ENST00000579609 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
PPP4R1-213ENST00000579609 IPO9Q96P70 1041 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-213ENST00000579609 COG6Q9Y2V7 657 aa11.29□□□□□ -0.6
PPP4R1-213ENST00000579609 SLIT3O75094 1523 aa11.29□□□□□ -0.6
PPP4R1-213ENST00000579609 ABCC6O95255 1503 aa11.29□□□□□ -0.6
PPP4R1-213ENST00000579609 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-213ENST00000579609 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
PPP4R1-213ENST00000579609 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-213ENST00000579609 NFAT5O94916 1531 aa11.28□□□□□ -0.6
PPP4R1-213ENST00000579609 NCKAP5LQ9HCH0 1330 aa11.28□□□□□ -0.6
PPP4R1-213ENST00000579609 CAMTA1Q9Y6Y1 1673 aa11.27□□□□□ -0.6
PPP4R1-213ENST00000579609 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 TRIM27P14373 513 aa11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 MAP3K19Q56UN5 1328 aa11.27□□□□□ -0.61
PPP4R1-213ENST00000579609 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 VAMP4O75379 141 aa11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 KCNH5Q8NCM2 988 aa11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 PHF8Q9UPP1 1060 aa11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
PPP4R1-213ENST00000579609 CHL1O00533 1208 aa11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 HMOX1P09601 288 aa11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 RLBP1P12271 317 aa11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 ABCC4O15439 1325 aa11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 OVOS2A0A0G2JMS6 1433 aa11.25□□□□□ -0.61
PPP4R1-213ENST00000579609 EIF5BO60841 1220 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 ZBTB40Q9NUA8 1239 aa11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 CRB1P82279 1406 aa11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-213ENST00000579609 IGHDP01880 384 aa11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 NLRP6P59044 892 aa11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 TWISTNBQ3B726 338 aaPredicted RBP11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 SMC5Q8IY18 1101 aa11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 PTPRCP08575 1304 aa11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 MED1Q15648 1581 aaPredicted RBP11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 LMO7Q8WWI1 1683 aa11.23□□□□□ -0.61
PPP4R1-213ENST00000579609 AMPHP49418 695 aa11.22□□□□□ -0.61
PPP4R1-213ENST00000579609 NUBP1P53384 320 aa11.22□□□□□ -0.61
PPP4R1-213ENST00000579609 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
PPP4R1-213ENST00000579609 ALS2Q96Q42 1657 aa11.22□□□□□ -0.61
PPP4R1-213ENST00000579609 HOXC9P31274 260 aa11.21□□□□□ -0.61
PPP4R1-213ENST00000579609 HSP90AB2PQ58FF8 381 aa11.21□□□□□ -0.61
PPP4R1-213ENST00000579609 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-213ENST00000579609 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
PPP4R1-213ENST00000579609 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.61
PPP4R1-213ENST00000579609 USP19O94966 1318 aa11.2□□□□□ -0.62
PPP4R1-213ENST00000579609 FBLN1P23142 703 aa11.2□□□□□ -0.62
PPP4R1-213ENST00000579609 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
PPP4R1-213ENST00000579609 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
PPP4R1-213ENST00000579609 IP6K1Q92551 441 aa11.2□□□□□ -0.62
PPP4R1-213ENST00000579609 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
PPP4R1-213ENST00000579609 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
PPP4R1-213ENST00000579609 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
PPP4R1-213ENST00000579609 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-213ENST00000579609 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-213ENST00000579609 TMEM57Q8N5G2 664 aa11.19□□□□□ -0.62
PPP4R1-213ENST00000579609 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-213ENST00000579609 ADAMTS7Q9UKP4 1686 aa11.19□□□□□ -0.62
PPP4R1-213ENST00000579609 KDM3BQ7LBC6 1761 aa11.18□□□□□ -0.62
PPP4R1-213ENST00000579609 MAP3K5Q99683 1374 aa11.18□□□□□ -0.62
PPP4R1-213ENST00000579609 HOXB7P09629 217 aa11.18□□□□□ -0.62
PPP4R1-213ENST00000579609 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
PPP4R1-213ENST00000579609 EYA1Q99502 592 aa11.18□□□□□ -0.62
PPP4R1-213ENST00000579609 C19orf44Q9H6X5 657 aa11.18□□□□□ -0.62
PPP4R1-213ENST00000579609 C1orf167Q5SNV9 1468 aa11.18□□□□□ -0.62
PPP4R1-213ENST00000579609 ZBTB7BO15156 539 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-213ENST00000579609 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
PPP4R1-213ENST00000579609 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
PPP4R1-213ENST00000579609 NUTM2FA1L443 756 aa11.16□□□□□ -0.62
PPP4R1-213ENST00000579609 GNAT3A8MTJ3 354 aa11.16□□□□□ -0.62
PPP4R1-213ENST00000579609 PSME1Q06323 249 aa11.16□□□□□ -0.62
PPP4R1-213ENST00000579609 LAS1LQ9Y4W2 734 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-213ENST00000579609 RGS3P49796 1198 aa11.15□□□□□ -0.62
PPP4R1-213ENST00000579609 GSE1Q14687 1217 aa11.15□□□□□ -0.62
PPP4R1-213ENST00000579609 MTHFSDQ2M296 383 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-213ENST00000579609 AMOTQ4VCS5 1084 aa11.15□□□□□ -0.62
PPP4R1-213ENST00000579609 C8orf58Q8NAV2 365 aa11.15□□□□□ -0.62
PPP4R1-213ENST00000579609 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-213ENST00000579609 RGS12O14924 1447 aa11.15□□□□□ -0.62
PPP4R1-213ENST00000579609 MSH6P52701 1360 aa11.15□□□□□ -0.63
PPP4R1-213ENST00000579609 NUCB1Q02818 461 aa11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms