RNA–Protein interactions for RNA: ENST00000578998.1

RBFOX3-202, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 3,072 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-202ENST00000578998 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
RBFOX3-202ENST00000578998 EXOC6BQ9Y2D4 811 aa16.25■□□□□ 0.19
RBFOX3-202ENST00000578998 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
RBFOX3-202ENST00000578998 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
RBFOX3-202ENST00000578998 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
RBFOX3-202ENST00000578998 CPSF1Q10570 1443 aaKnown RBP16.25■□□□□ 0.19
RBFOX3-202ENST00000578998 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
RBFOX3-202ENST00000578998 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
RBFOX3-202ENST00000578998 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
RBFOX3-202ENST00000578998 PIK3R4Q99570 1358 aa16.24■□□□□ 0.19
RBFOX3-202ENST00000578998 TPRNQ4KMQ1 711 aa16.23■□□□□ 0.19
RBFOX3-202ENST00000578998 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
RBFOX3-202ENST00000578998 CIZ1Q9ULV3 898 aaPredicted RBP16.23■□□□□ 0.19
RBFOX3-202ENST00000578998 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
RBFOX3-202ENST00000578998 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
RBFOX3-202ENST00000578998 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
RBFOX3-202ENST00000578998 AK9Q5TCS8 1911 aa16.23■□□□□ 0.19
RBFOX3-202ENST00000578998 CHL1O00533 1208 aa16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 USP26Q9BXU7 913 aa16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 AMPHP49418 695 aa16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 CASC1Q6TDU7 716 aa16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
RBFOX3-202ENST00000578998 ROBO2Q9HCK4 1378 aa16.21■□□□□ 0.19
RBFOX3-202ENST00000578998 ZBTB7CA1YPR0 619 aa16.21■□□□□ 0.19
RBFOX3-202ENST00000578998 RABEP1Q15276 862 aa16.21■□□□□ 0.19
RBFOX3-202ENST00000578998 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
RBFOX3-202ENST00000578998 RPAP2Q8IXW5 612 aaPredicted RBP16.2■□□□□ 0.18
RBFOX3-202ENST00000578998 CAVIN1Q6NZI2 390 aaKnown RBP16.2■□□□□ 0.18
RBFOX3-202ENST00000578998 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
RBFOX3-202ENST00000578998 AATKQ6ZMQ8 1374 aa16.2■□□□□ 0.18
RBFOX3-202ENST00000578998 FKBP5Q13451 457 aaPredicted RBP16.2■□□□□ 0.18
RBFOX3-202ENST00000578998 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
RBFOX3-202ENST00000578998 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
RBFOX3-202ENST00000578998 TRIM6-TRIM34B2RNG4 842 aa16.19■□□□□ 0.18
RBFOX3-202ENST00000578998 CDC42BPGQ6DT37 1551 aa16.19■□□□□ 0.18
RBFOX3-202ENST00000578998 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
RBFOX3-202ENST00000578998 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
RBFOX3-202ENST00000578998 DLG5Q8TDM6 1919 aa16.18■□□□□ 0.18
RBFOX3-202ENST00000578998 SKOR2Q2VWA4 1001 aaPredicted RBP16.17■□□□□ 0.18
RBFOX3-202ENST00000578998 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
RBFOX3-202ENST00000578998 STK31Q9BXU1 1019 aa16.17■□□□□ 0.18
RBFOX3-202ENST00000578998 ST18O60284 1047 aa16.17■□□□□ 0.18
RBFOX3-202ENST00000578998 HMMRO75330 724 aa16.17■□□□□ 0.18
RBFOX3-202ENST00000578998 LTKP29376 864 aa16.17■□□□□ 0.18
RBFOX3-202ENST00000578998 NEK4P51957 841 aa16.17■□□□□ 0.18
RBFOX3-202ENST00000578998 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
RBFOX3-202ENST00000578998 ESPNB1AK53 854 aa16.16■□□□□ 0.18
RBFOX3-202ENST00000578998 RBM27Q9P2N5 1060 aaKnown RBP16.16■□□□□ 0.18
RBFOX3-202ENST00000578998 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
RBFOX3-202ENST00000578998 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 USHBP1Q8N6Y0 703 aa16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 KNDC1Q76NI1 1749 aa16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 IL1RAPL2Q9NP60 686 aa16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 PDE1AP54750 535 aa16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 EYA1Q99502 592 aa16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 ANO2Q9NQ90 1003 aa16.15■□□□□ 0.18
RBFOX3-202ENST00000578998 RGS12O14924 1447 aa16.14■□□□□ 0.17
RBFOX3-202ENST00000578998 ERC2O15083 957 aa16.14■□□□□ 0.17
RBFOX3-202ENST00000578998 REC8O95072 547 aa16.14■□□□□ 0.17
RBFOX3-202ENST00000578998 NLRP6P59044 892 aa16.14■□□□□ 0.17
RBFOX3-202ENST00000578998 PTPRCP08575 1304 aa16.14■□□□□ 0.17
RBFOX3-202ENST00000578998 PNMA6EA0A0J9YXQ4 647 aa16.14■□□□□ 0.17
RBFOX3-202ENST00000578998 DLC1Q96QB1 1528 aa16.14■□□□□ 0.17
RBFOX3-202ENST00000578998 GNAI2P04899 355 aa16.13■□□□□ 0.17
RBFOX3-202ENST00000578998 RBM33Q96EV2 1170 aaKnown RBP16.13■□□□□ 0.17
RBFOX3-202ENST00000578998 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
RBFOX3-202ENST00000578998 ANP32BQ92688 251 aaKnown RBP16.13■□□□□ 0.17
RBFOX3-202ENST00000578998 UPF3BQ9BZI7 483 aaKnown RBP16.13■□□□□ 0.17
RBFOX3-202ENST00000578998 RIMBP3CA6NJZ7 1639 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 RIMBP3BA6NNM3 1639 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 RIMBP3Q9UFD9 1639 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 DTNBO60941 627 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 CLCN1P35523 988 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 NUCB2P80303 420 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 AMOTL2Q9Y2J4 779 aa16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 LRRFIP2Q9Y608 721 aaKnown RBP16.12■□□□□ 0.17
RBFOX3-202ENST00000578998 FLIIQ13045 1269 aa16.11■□□□□ 0.17
RBFOX3-202ENST00000578998 TNRQ92752 1358 aa16.11■□□□□ 0.17
RBFOX3-202ENST00000578998 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
RBFOX3-202ENST00000578998 PALD1Q9ULE6 856 aa16.11■□□□□ 0.17
RBFOX3-202ENST00000578998 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
RBFOX3-202ENST00000578998 CCT4P50991 539 aaKnown RBP16.1■□□□□ 0.17
RBFOX3-202ENST00000578998 LARP6Q9BRS8 491 aaKnown RBP16.1■□□□□ 0.17
RBFOX3-202ENST00000578998 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
RBFOX3-202ENST00000578998 LMBRD1Q9NUN5 540 aa16.09■□□□□ 0.17
RBFOX3-202ENST00000578998 ZSCAN23Q3MJ62 389 aa16.09■□□□□ 0.17
RBFOX3-202ENST00000578998 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
RBFOX3-202ENST00000578998 ANXA1P04083 346 aa16.08■□□□□ 0.17
RBFOX3-202ENST00000578998 MX1P20591 662 aa16.08■□□□□ 0.17
RBFOX3-202ENST00000578998 PTMSP20962 102 aa16.08■□□□□ 0.17
RBFOX3-202ENST00000578998 KIAA0232Q92628 1395 aa16.08■□□□□ 0.17
RBFOX3-202ENST00000578998 TMEM2Q9UHN6 1383 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms