RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 GPT2Q8TD30 523 aa17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 ZDHHC9Q9Y397 364 aa17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 GOLGA6L22H0YM25 854 aa17.2■□□□□ 0.34
RBFOX3-201ENST00000578887 OFD1O75665 1012 aa17.2■□□□□ 0.34
RBFOX3-201ENST00000578887 BRD2P25440 801 aaKnown RBP17.2■□□□□ 0.34
RBFOX3-201ENST00000578887 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
RBFOX3-201ENST00000578887 PRPF40AO75400 957 aaKnown RBP17.2■□□□□ 0.34
RBFOX3-201ENST00000578887 CYP2E1P05181 493 aaPredicted RBP17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 TPM2P07951 284 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 KRT24Q2M2I5 525 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 ABCC4O15439 1325 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 FCHSD2O94868 740 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 ARID3AQ99856 593 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
RBFOX3-201ENST00000578887 PUS7Q96PZ0 661 aaKnown RBP17.18■□□□□ 0.34
RBFOX3-201ENST00000578887 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
RBFOX3-201ENST00000578887 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
RBFOX3-201ENST00000578887 MSNP26038 577 aaKnown RBP17.18■□□□□ 0.34
RBFOX3-201ENST00000578887 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 BRPF1P55201 1214 aaPredicted RBP17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 ZNF445P59923 1031 aa17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 CALD1Q05682 793 aaKnown RBP17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 TWISTNBQ3B726 338 aaPredicted RBP17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 PIK3R4Q99570 1358 aa17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 TERF2IPQ9NYB0 399 aa17.17■□□□□ 0.34
RBFOX3-201ENST00000578887 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
RBFOX3-201ENST00000578887 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
RBFOX3-201ENST00000578887 PTPRMP28827 1452 aa17.16■□□□□ 0.34
RBFOX3-201ENST00000578887 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
RBFOX3-201ENST00000578887 RABEP1Q15276 862 aa17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 FAM13BQ9NYF5 915 aa17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 SDSP20132 328 aa17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 ANP32BQ92688 251 aaKnown RBP17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 YTHDC2Q9H6S0 1430 aaKnown RBP17.15■□□□□ 0.34
RBFOX3-201ENST00000578887 PTMSP20962 102 aa17.14■□□□□ 0.34
RBFOX3-201ENST00000578887 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.34
RBFOX3-201ENST00000578887 CDK19Q9BWU1 502 aa17.14■□□□□ 0.34
RBFOX3-201ENST00000578887 PDCL3Q9H2J4 239 aa17.14■□□□□ 0.34
RBFOX3-201ENST00000578887 NRXN3Q9Y4C0 1643 aa17.14■□□□□ 0.33
RBFOX3-201ENST00000578887 SYCE3A1L190 88 aa17.14■□□□□ 0.33
RBFOX3-201ENST00000578887 RNF214Q8ND24 703 aa17.14■□□□□ 0.33
RBFOX3-201ENST00000578887 TAF7LQ5H9L4 462 aa17.14■□□□□ 0.33
RBFOX3-201ENST00000578887 DCTPP1Q9H773 170 aa17.14■□□□□ 0.33
RBFOX3-201ENST00000578887 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
RBFOX3-201ENST00000578887 MPNDQ8N594 471 aa17.13■□□□□ 0.33
RBFOX3-201ENST00000578887 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
RBFOX3-201ENST00000578887 TMEM2Q9UHN6 1383 aa17.12■□□□□ 0.33
RBFOX3-201ENST00000578887 NUCB2P80303 420 aa17.12■□□□□ 0.33
RBFOX3-201ENST00000578887 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
RBFOX3-201ENST00000578887 NOL7Q9UMY1 257 aaKnown RBP17.12■□□□□ 0.33
RBFOX3-201ENST00000578887 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
RBFOX3-201ENST00000578887 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
RBFOX3-201ENST00000578887 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
RBFOX3-201ENST00000578887 GNAI1P63096 354 aa17.11■□□□□ 0.33
RBFOX3-201ENST00000578887 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
RBFOX3-201ENST00000578887 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
RBFOX3-201ENST00000578887 HDGFL2Q7Z4V5 671 aaPredicted RBP17.1■□□□□ 0.33
RBFOX3-201ENST00000578887 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
RBFOX3-201ENST00000578887 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
RBFOX3-201ENST00000578887 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.1■□□□□ 0.33
RBFOX3-201ENST00000578887 ZNF428Q96B54 188 aa17.1■□□□□ 0.33
RBFOX3-201ENST00000578887 RRS1Q15050 365 aaKnown RBP17.09■□□□□ 0.33
RBFOX3-201ENST00000578887 WAPLQ7Z5K2 1190 aa17.09■□□□□ 0.33
RBFOX3-201ENST00000578887 ATP10DQ9P241 1426 aa17.08■□□□□ 0.33
RBFOX3-201ENST00000578887 IL13P35225 146 aa17.08■□□□□ 0.33
RBFOX3-201ENST00000578887 NME9Q86XW9 330 aa17.08■□□□□ 0.33
RBFOX3-201ENST00000578887 MEIS3Q99687 375 aa17.08■□□□□ 0.33
RBFOX3-201ENST00000578887 METP08581 1390 aa17.08■□□□□ 0.33
RBFOX3-201ENST00000578887 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
RBFOX3-201ENST00000578887 UQCRHP07919 91 aa17.08■□□□□ 0.32
RBFOX3-201ENST00000578887 INTS3Q68E01 1043 aaKnown RBP17.08■□□□□ 0.32
RBFOX3-201ENST00000578887 NCKAP5LQ9HCH0 1330 aa17.08■□□□□ 0.32
RBFOX3-201ENST00000578887 LTKP29376 864 aa17.07■□□□□ 0.32
RBFOX3-201ENST00000578887 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
RBFOX3-201ENST00000578887 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
RBFOX3-201ENST00000578887 ZNF500O60304 480 aaPredicted RBP17.06■□□□□ 0.32
RBFOX3-201ENST00000578887 ANKRD44Q8N8A2 993 aa17.06■□□□□ 0.32
RBFOX3-201ENST00000578887 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
RBFOX3-201ENST00000578887 GDPD2Q9HCC8 539 aa17.06■□□□□ 0.32
RBFOX3-201ENST00000578887 ZKSCAN5Q9Y2L8 839 aa17.06■□□□□ 0.32
RBFOX3-201ENST00000578887 HDGFP51858 240 aaKnown RBP17.05■□□□□ 0.32
RBFOX3-201ENST00000578887 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
RBFOX3-201ENST00000578887 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
RBFOX3-201ENST00000578887 CHMP4BQ9H444 224 aaKnown RBP17.05■□□□□ 0.32
RBFOX3-201ENST00000578887 PALD1Q9ULE6 856 aa17.05■□□□□ 0.32
RBFOX3-201ENST00000578887 MSH6P52701 1360 aa17.05■□□□□ 0.32
RBFOX3-201ENST00000578887 NEK4P51957 841 aa17.04■□□□□ 0.32
RBFOX3-201ENST00000578887 LRSAM1Q6UWE0 723 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms