RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
RTTN-202ENST00000578780 EYA1Q99502 592 aa12.67□□□□□ -0.38
RTTN-202ENST00000578780 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
RTTN-202ENST00000578780 MSH6P52701 1360 aa12.67□□□□□ -0.38
RTTN-202ENST00000578780 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
RTTN-202ENST00000578780 PAXIP1Q6ZW49 1069 aaPredicted RBP12.67□□□□□ -0.38
RTTN-202ENST00000578780 ERBB4Q15303 1308 aa12.66□□□□□ -0.38
RTTN-202ENST00000578780 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
RTTN-202ENST00000578780 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
RTTN-202ENST00000578780 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
RTTN-202ENST00000578780 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
RTTN-202ENST00000578780 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
RTTN-202ENST00000578780 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
RTTN-202ENST00000578780 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
RTTN-202ENST00000578780 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
RTTN-202ENST00000578780 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
RTTN-202ENST00000578780 ZBTB7CA1YPR0 619 aa12.65□□□□□ -0.38
RTTN-202ENST00000578780 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
RTTN-202ENST00000578780 ESPNB1AK53 854 aa12.65□□□□□ -0.38
RTTN-202ENST00000578780 IP6K1Q92551 441 aa12.65□□□□□ -0.38
RTTN-202ENST00000578780 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
RTTN-202ENST00000578780 NFAT5O94916 1531 aa12.65□□□□□ -0.38
RTTN-202ENST00000578780 ZNF335Q9H4Z2 1342 aaPredicted RBP12.65□□□□□ -0.38
RTTN-202ENST00000578780 GCP02774 474 aa12.65□□□□□ -0.39
RTTN-202ENST00000578780 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.39
RTTN-202ENST00000578780 KDRP35968 1356 aa12.64□□□□□ -0.39
RTTN-202ENST00000578780 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
RTTN-202ENST00000578780 ARXQ96QS3 562 aa12.64□□□□□ -0.39
RTTN-202ENST00000578780 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
RTTN-202ENST00000578780 GNAI1P63096 354 aa12.63□□□□□ -0.39
RTTN-202ENST00000578780 TRPM3Q9HCF6 1732 aaPredicted RBP12.63□□□□□ -0.39
RTTN-202ENST00000578780 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
RTTN-202ENST00000578780 PDE3AQ14432 1141 aa12.63□□□□□ -0.39
RTTN-202ENST00000578780 DLG5Q8TDM6 1919 aa12.63□□□□□ -0.39
RTTN-202ENST00000578780 LTN1O94822 1766 aa12.62□□□□□ -0.39
RTTN-202ENST00000578780 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
RTTN-202ENST00000578780 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
RTTN-202ENST00000578780 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
RTTN-202ENST00000578780 SLIT3O75094 1523 aa12.62□□□□□ -0.39
RTTN-202ENST00000578780 USP19O94966 1318 aa12.62□□□□□ -0.39
RTTN-202ENST00000578780 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
RTTN-202ENST00000578780 ARHGEF25Q86VW2 580 aa12.61□□□□□ -0.39
RTTN-202ENST00000578780 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
RTTN-202ENST00000578780 XIRP1Q702N8 1843 aaKnown RBP12.61□□□□□ -0.39
RTTN-202ENST00000578780 MCM10Q7L590 875 aa12.61□□□□□ -0.39
RTTN-202ENST00000578780 PANK1Q8TE04 598 aa12.61□□□□□ -0.39
RTTN-202ENST00000578780 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
RTTN-202ENST00000578780 MBIPQ9NS73 344 aa12.61□□□□□ -0.39
RTTN-202ENST00000578780 KIAA1211Q6ZU35 1233 aa12.6□□□□□ -0.39
RTTN-202ENST00000578780 USHBP1Q8N6Y0 703 aa12.6□□□□□ -0.39
RTTN-202ENST00000578780 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
RTTN-202ENST00000578780 COG6Q9Y2V7 657 aa12.59□□□□□ -0.39
RTTN-202ENST00000578780 NBPF6Q5VWK0 638 aa12.59□□□□□ -0.39
RTTN-202ENST00000578780 BRINP3Q76B58 766 aa12.59□□□□□ -0.39
RTTN-202ENST00000578780 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
RTTN-202ENST00000578780 NBPF4Q96M43 638 aa12.59□□□□□ -0.39
RTTN-202ENST00000578780 ALS2Q96Q42 1657 aa12.59□□□□□ -0.39
RTTN-202ENST00000578780 TMEM51Q9NW97 253 aa12.59□□□□□ -0.39
RTTN-202ENST00000578780 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
RTTN-202ENST00000578780 ZKSCAN2Q63HK3 967 aa12.58□□□□□ -0.4
RTTN-202ENST00000578780 PHRF1Q9P1Y6 1649 aaKnown RBP12.58□□□□□ -0.4
RTTN-202ENST00000578780 VAMP4O75379 141 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
RTTN-202ENST00000578780 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
RTTN-202ENST00000578780 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 ELL2O00472 640 aaPredicted RBP12.57□□□□□ -0.4
RTTN-202ENST00000578780 RLBP1P12271 317 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
RTTN-202ENST00000578780 LRRC59Q96AG4 307 aaKnown RBP12.56□□□□□ -0.4
RTTN-202ENST00000578780 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
RTTN-202ENST00000578780 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
RTTN-202ENST00000578780 PXDNQ92626 1479 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 TNS3Q68CZ2 1445 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 SPATA31A3Q5VYP0 1347 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 CHL1O00533 1208 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 DMTNQ08495 405 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
RTTN-202ENST00000578780 C8orf58Q8NAV2 365 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
RTTN-202ENST00000578780 GNAT3A8MTJ3 354 aa12.55□□□□□ -0.4
RTTN-202ENST00000578780 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
RTTN-202ENST00000578780 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
RTTN-202ENST00000578780 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
RTTN-202ENST00000578780 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
RTTN-202ENST00000578780 ZNF830Q96NB3 372 aaPredicted RBP12.55□□□□□ -0.4
RTTN-202ENST00000578780 PRDM10Q9NQV6 1147 aa12.55□□□□□ -0.4
RTTN-202ENST00000578780 CRB1P82279 1406 aa12.55□□□□□ -0.4
RTTN-202ENST00000578780 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
RTTN-202ENST00000578780 TRIM27P14373 513 aa12.54□□□□□ -0.4
RTTN-202ENST00000578780 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
RTTN-202ENST00000578780 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
RTTN-202ENST00000578780 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms