RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
CSNK1D-207ENST00000578194 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
CSNK1D-207ENST00000578194 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-207ENST00000578194 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
CSNK1D-207ENST00000578194 IL13P35225 146 aa17.09■□□□□ 0.33
CSNK1D-207ENST00000578194 DDX54Q8TDD1 881 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-207ENST00000578194 TRIM37O94972 964 aa17.08■□□□□ 0.32
CSNK1D-207ENST00000578194 BAG6P46379 1132 aa17.08■□□□□ 0.32
CSNK1D-207ENST00000578194 COL3A1P02461 1466 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-207ENST00000578194 PCDH11XQ9BZA7 1347 aa17.07■□□□□ 0.32
CSNK1D-207ENST00000578194 PCDH11YQ9BZA8 1340 aa17.07■□□□□ 0.32
CSNK1D-207ENST00000578194 RALBP1Q15311 655 aa17.07■□□□□ 0.32
CSNK1D-207ENST00000578194 SPG7Q9UQ90 795 aa17.07■□□□□ 0.32
CSNK1D-207ENST00000578194 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
CSNK1D-207ENST00000578194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
CSNK1D-207ENST00000578194 DOT1LQ8TEK3 1739 aa17.04■□□□□ 0.32
CSNK1D-207ENST00000578194 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
CSNK1D-207ENST00000578194 BCL11BQ9C0K0 894 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-207ENST00000578194 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
CSNK1D-207ENST00000578194 KDRP35968 1356 aa17.03■□□□□ 0.32
CSNK1D-207ENST00000578194 RGPD3A6NKT7 1758 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-207ENST00000578194 RGPD4Q7Z3J3 1758 aa17.03■□□□□ 0.32
CSNK1D-207ENST00000578194 APBA3O96018 575 aa17.03■□□□□ 0.32
CSNK1D-207ENST00000578194 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-207ENST00000578194 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
CSNK1D-207ENST00000578194 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-207ENST00000578194 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.32
CSNK1D-207ENST00000578194 BTAF1O14981 1849 aa17.01■□□□□ 0.31
CSNK1D-207ENST00000578194 DEFB132Q7Z7B7 95 aa17.01■□□□□ 0.31
CSNK1D-207ENST00000578194 MYBBP1AQ9BQG0 1328 aaKnown RBP17■□□□□ 0.31
CSNK1D-207ENST00000578194 ACSBG1Q96GR2 724 aa17■□□□□ 0.31
CSNK1D-207ENST00000578194 CYP27B1O15528 508 aa16.99■□□□□ 0.31
CSNK1D-207ENST00000578194 HMOX1P09601 288 aa16.99■□□□□ 0.31
CSNK1D-207ENST00000578194 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
CSNK1D-207ENST00000578194 EN1Q05925 392 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-207ENST00000578194 ITGB4P16144 1822 aa16.98■□□□□ 0.31
CSNK1D-207ENST00000578194 RREB1Q92766 1687 aa16.97■□□□□ 0.31
CSNK1D-207ENST00000578194 EP400Q96L91 3159 aa16.97■□□□□ 0.31
CSNK1D-207ENST00000578194 KCNQ2O43526 872 aa16.97■□□□□ 0.31
CSNK1D-207ENST00000578194 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-207ENST00000578194 PHKG2P15735 406 aa16.97■□□□□ 0.31
CSNK1D-207ENST00000578194 ZNF530Q6P9A1 599 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-207ENST00000578194 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-207ENST00000578194 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.31
CSNK1D-207ENST00000578194 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-207ENST00000578194 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
CSNK1D-207ENST00000578194 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-207ENST00000578194 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
CSNK1D-207ENST00000578194 SYTL4Q96C24 671 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-207ENST00000578194 PLSCR1O15162 318 aa16.95■□□□□ 0.3
CSNK1D-207ENST00000578194 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-207ENST00000578194 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
CSNK1D-207ENST00000578194 CAMKK2Q96RR4 588 aa16.95■□□□□ 0.3
CSNK1D-207ENST00000578194 EZH2Q15910 746 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-207ENST00000578194 NUP188Q5SRE5 1749 aa16.93■□□□□ 0.3
CSNK1D-207ENST00000578194 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-207ENST00000578194 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
CSNK1D-207ENST00000578194 FCHSD2O94868 740 aa16.92■□□□□ 0.3
CSNK1D-207ENST00000578194 DCAF5Q96JK2 942 aa16.92■□□□□ 0.3
CSNK1D-207ENST00000578194 PRKAR2BP31323 418 aa16.91■□□□□ 0.3
CSNK1D-207ENST00000578194 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
CSNK1D-207ENST00000578194 RSPH6AQ9H0K4 717 aa16.91■□□□□ 0.3
CSNK1D-207ENST00000578194 LY75O60449 1722 aa16.9■□□□□ 0.3
CSNK1D-207ENST00000578194 ANP32CO43423 234 aa16.9■□□□□ 0.3
CSNK1D-207ENST00000578194 NEFMP07197 916 aa16.9■□□□□ 0.3
CSNK1D-207ENST00000578194 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
CSNK1D-207ENST00000578194 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-207ENST00000578194 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
CSNK1D-207ENST00000578194 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-207ENST00000578194 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
CSNK1D-207ENST00000578194 TMOD3Q9NYL9 352 aa16.89■□□□□ 0.29
CSNK1D-207ENST00000578194 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
CSNK1D-207ENST00000578194 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
CSNK1D-207ENST00000578194 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-207ENST00000578194 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-207ENST00000578194 ADAMTS7Q9UKP4 1686 aa16.86■□□□□ 0.29
CSNK1D-207ENST00000578194 CABP4P57796 275 aa16.86■□□□□ 0.29
CSNK1D-207ENST00000578194 WDR43Q15061 677 aaKnown RBP eCLIP16.86■□□□□ 0.29
CSNK1D-207ENST00000578194 SLC27A3Q5K4L6 730 aa16.86■□□□□ 0.29
CSNK1D-207ENST00000578194 MAP3K5Q99683 1374 aa16.86■□□□□ 0.29
CSNK1D-207ENST00000578194 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
CSNK1D-207ENST00000578194 HMGB2P26583 209 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-207ENST00000578194 PIGBQ92521 554 aa16.85■□□□□ 0.29
CSNK1D-207ENST00000578194 PROM2Q8N271 834 aa16.84■□□□□ 0.29
CSNK1D-207ENST00000578194 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
CSNK1D-207ENST00000578194 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
CSNK1D-207ENST00000578194 PALLDQ8WX93 1383 aa16.84■□□□□ 0.29
CSNK1D-207ENST00000578194 RNMTO43148 476 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-207ENST00000578194 MRC1P22897 1456 aa16.83■□□□□ 0.28
CSNK1D-207ENST00000578194 DLG5Q8TDM6 1919 aa16.82■□□□□ 0.28
CSNK1D-207ENST00000578194 CCNL1Q9UK58 526 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-207ENST00000578194 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
CSNK1D-207ENST00000578194 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
CSNK1D-207ENST00000578194 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
CSNK1D-207ENST00000578194 TAF1LQ8IZX4 1826 aa16.81■□□□□ 0.28
CSNK1D-207ENST00000578194 C5P01031 1676 aa16.81■□□□□ 0.28
CSNK1D-207ENST00000578194 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-207ENST00000578194 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
CSNK1D-207ENST00000578194 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-207ENST00000578194 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms