RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 REC8O95072 547 aa16.7■□□□□ 0.26
NDEL1-204ENST00000578172 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
NDEL1-204ENST00000578172 GNAI2P04899 355 aa16.69■□□□□ 0.26
NDEL1-204ENST00000578172 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
NDEL1-204ENST00000578172 GLI2P10070 1586 aa16.69■□□□□ 0.26
NDEL1-204ENST00000578172 SYCE3A1L190 88 aa16.69■□□□□ 0.26
NDEL1-204ENST00000578172 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
NDEL1-204ENST00000578172 ABCC3O15438 1527 aa16.69■□□□□ 0.26
NDEL1-204ENST00000578172 PHAXQ9H814 394 aaKnown RBP16.68■□□□□ 0.26
NDEL1-204ENST00000578172 ESPNB1AK53 854 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 MCCP23508 829 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 FOSBP53539 338 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 RABEP1Q15276 862 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 UBE2Q2Q8WVN8 375 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 PNMA6EA0A0J9YXQ4 647 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 SIL1Q9H173 461 aa16.68■□□□□ 0.26
NDEL1-204ENST00000578172 ERC2O15083 957 aa16.67■□□□□ 0.26
NDEL1-204ENST00000578172 CPA1P15085 419 aa16.67■□□□□ 0.26
NDEL1-204ENST00000578172 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
NDEL1-204ENST00000578172 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
NDEL1-204ENST00000578172 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
NDEL1-204ENST00000578172 FLIIQ13045 1269 aa16.67■□□□□ 0.26
NDEL1-204ENST00000578172 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
NDEL1-204ENST00000578172 EYA1Q99502 592 aa16.67■□□□□ 0.26
NDEL1-204ENST00000578172 PIP4K2AP48426 406 aaPredicted RBP16.66■□□□□ 0.26
NDEL1-204ENST00000578172 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
NDEL1-204ENST00000578172 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
NDEL1-204ENST00000578172 TEFQ10587 303 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 KIAA1211Q6ZU35 1233 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 LRRCC1Q9C099 1032 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 IQSEC2Q5JU85 1478 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 ADGRB3O60242 1522 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 MPRIPQ6WCQ1 1025 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
NDEL1-204ENST00000578172 SPG7Q9UQ90 795 aa16.66■□□□□ 0.26
NDEL1-204ENST00000578172 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
NDEL1-204ENST00000578172 LTKP29376 864 aa16.65■□□□□ 0.26
NDEL1-204ENST00000578172 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
NDEL1-204ENST00000578172 KIF2CQ99661 725 aa16.65■□□□□ 0.26
NDEL1-204ENST00000578172 RPAP2Q8IXW5 612 aaPredicted RBP16.65■□□□□ 0.26
NDEL1-204ENST00000578172 INO80Q9ULG1 1556 aaPredicted RBP16.65■□□□□ 0.26
NDEL1-204ENST00000578172 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
NDEL1-204ENST00000578172 PDE1AP54750 535 aa16.64■□□□□ 0.25
NDEL1-204ENST00000578172 ADGRB1O14514 1584 aa16.64■□□□□ 0.25
NDEL1-204ENST00000578172 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
NDEL1-204ENST00000578172 FAM13BQ9NYF5 915 aa16.64■□□□□ 0.25
NDEL1-204ENST00000578172 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
NDEL1-204ENST00000578172 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
NDEL1-204ENST00000578172 LRRC59Q96AG4 307 aaKnown RBP16.64■□□□□ 0.25
NDEL1-204ENST00000578172 TCEANC2Q96MN5 208 aa16.64■□□□□ 0.25
NDEL1-204ENST00000578172 FIBPO43427 364 aa16.63■□□□□ 0.25
NDEL1-204ENST00000578172 MX1P20591 662 aa16.63■□□□□ 0.25
NDEL1-204ENST00000578172 PALD1Q9ULE6 856 aa16.63■□□□□ 0.25
NDEL1-204ENST00000578172 PSME1Q06323 249 aa16.63■□□□□ 0.25
NDEL1-204ENST00000578172 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
NDEL1-204ENST00000578172 SKOR2Q2VWA4 1001 aaPredicted RBP16.63■□□□□ 0.25
NDEL1-204ENST00000578172 ARHGAP45Q92619 1136 aa16.63■□□□□ 0.25
NDEL1-204ENST00000578172 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
NDEL1-204ENST00000578172 MROH1Q8NDA8 1641 aa16.62■□□□□ 0.25
NDEL1-204ENST00000578172 NLRP1Q9C000 1473 aa16.62■□□□□ 0.25
NDEL1-204ENST00000578172 ABCC4O15439 1325 aa16.62■□□□□ 0.25
NDEL1-204ENST00000578172 VPS37CA5D8V6 355 aaPredicted RBP16.62■□□□□ 0.25
NDEL1-204ENST00000578172 NUCB2P80303 420 aa16.62■□□□□ 0.25
NDEL1-204ENST00000578172 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
NDEL1-204ENST00000578172 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
NDEL1-204ENST00000578172 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
NDEL1-204ENST00000578172 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
NDEL1-204ENST00000578172 A0A0U1RQG5 324 aaPredicted RBP16.61■□□□□ 0.25
NDEL1-204ENST00000578172 KCNQ3O43525 872 aa16.61■□□□□ 0.25
NDEL1-204ENST00000578172 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
NDEL1-204ENST00000578172 SNX21Q969T3 373 aa16.61■□□□□ 0.25
NDEL1-204ENST00000578172 MYL6BP14649 208 aa16.6■□□□□ 0.25
NDEL1-204ENST00000578172 TSPOAP1O95153 1857 aa16.6■□□□□ 0.25
NDEL1-204ENST00000578172 LRRC7Q96NW7 1537 aa16.6■□□□□ 0.25
NDEL1-204ENST00000578172 CHL1O00533 1208 aa16.6■□□□□ 0.25
NDEL1-204ENST00000578172 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
NDEL1-204ENST00000578172 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
NDEL1-204ENST00000578172 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 PPP1R42Q7Z4L9 355 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 MLH3Q9UHC1 1453 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 PI4KAP2A4QPH2 592 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 FERMT3Q86UX7 667 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 PI4KAP1Q8N8J0 262 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 CSB-PGBD3P0DP91 1061 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
NDEL1-204ENST00000578172 FGD1P98174 961 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 DIAPH3Q9NSV4 1193 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 AK9Q5TCS8 1911 aa16.59■□□□□ 0.25
NDEL1-204ENST00000578172 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
NDEL1-204ENST00000578172 ZNF853P0CG23 659 aa16.58■□□□□ 0.25
NDEL1-204ENST00000578172 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.25
NDEL1-204ENST00000578172 NSFL1CQ9UNZ2 370 aaKnown RBP16.58■□□□□ 0.25
NDEL1-204ENST00000578172 STK3Q13188 491 aa16.58■□□□□ 0.24
NDEL1-204ENST00000578172 LGR6Q9HBX8 967 aa16.58■□□□□ 0.24
NDEL1-204ENST00000578172 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.24
NDEL1-204ENST00000578172 ZMYM3Q14202 1370 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms