RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 KRBA2Q6ZNG9 492 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 RNF34Q969K3 372 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 ARPC5LQ9BPX5 153 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 ANP32EQ9BTT0 268 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 TMEM106CQ9BVX2 250 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 ERBB3P21860 1342 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 SPDYE16A6NNV3 312 aaPredicted RBP6.66□□□□□ -1.34
BRIP1-202ENST00000577598 FOSP01100 380 aaPredicted RBP6.66□□□□□ -1.34
BRIP1-202ENST00000577598 MNX1P50219 401 aaPredicted RBP6.66□□□□□ -1.34
BRIP1-202ENST00000577598 LRGUKQ96M69 825 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 GPHNQ9NQX3 736 aaPredicted RBP6.66□□□□□ -1.34
BRIP1-202ENST00000577598 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
BRIP1-202ENST00000577598 ATG7O95352 703 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 LMNB1P20700 586 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 SSFA2P28290 1259 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 CAMK2BQ13554 666 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 CARD14Q9BXL6 1004 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 DHX16O60231 1041 aaKnown RBP6.65□□□□□ -1.34
BRIP1-202ENST00000577598 CBLBQ13191 982 aa6.65□□□□□ -1.34
BRIP1-202ENST00000577598 SEPT6Q14141 434 aa6.65□□□□□ -1.34
BRIP1-202ENST00000577598 LRRC27Q9C0I9 530 aa6.65□□□□□ -1.34
BRIP1-202ENST00000577598 PRC1O43663 620 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 MFSD10Q14728 455 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 AS3MTQ9HBK9 375 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 R3HCC1Q9Y3T6 440 aaKnown RBP6.65□□□□□ -1.35
BRIP1-202ENST00000577598 FAM86C2PA6NEL3 165 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L15C9J2P7 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L10C9JJH3 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L13C9JLJ4 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L12C9JPN9 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L11C9JVI0 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L21D6R901 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L18D6R9N7 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L22D6RA61 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L17D6RBQ6 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L19D6RCP7 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L20D6RJB6 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 PER1O15534 1290 aaPredicted RBP6.65□□□□□ -1.35
BRIP1-202ENST00000577598 NRDCO43847 1150 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 DNAJC6O75061 913 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 USP17L24Q0WX57 530 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 L1TD1Q5T7N2 865 aaKnown RBP6.65□□□□□ -1.35
BRIP1-202ENST00000577598 ANO1Q5XXA6 986 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 CCDC81Q6ZN84 652 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 KCNG1Q9UIX4 513 aa6.65□□□□□ -1.35
BRIP1-202ENST00000577598 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.65□□□□□ -1.35
BRIP1-202ENST00000577598 PLEKHG6Q3KR16 790 aa6.64□□□□□ -1.35
BRIP1-202ENST00000577598 CCDC184Q52MB2 194 aa6.64□□□□□ -1.35
BRIP1-202ENST00000577598 HSCBQ8IWL3 235 aa6.64□□□□□ -1.35
BRIP1-202ENST00000577598 STAG1Q8WVM7 1258 aa6.64□□□□□ -1.35
BRIP1-202ENST00000577598 MTMR8Q96EF0 704 aa6.64□□□□□ -1.35
BRIP1-202ENST00000577598 SLKQ9H2G2 1235 aaPredicted RBP6.64□□□□□ -1.35
BRIP1-202ENST00000577598 TTF2Q9UNY4 1162 aaKnown RBP6.64□□□□□ -1.35
BRIP1-202ENST00000577598 EIF2AK1Q9BQI3 630 aaKnown RBP6.64□□□□□ -1.35
BRIP1-202ENST00000577598 DDX56Q9NY93 547 aaKnown RBP6.64□□□□□ -1.35
BRIP1-202ENST00000577598 PGBD3Q8N328 593 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 TTC30BQ8N4P2 665 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 SPDYE1Q8NFV5 336 aaPredicted RBP6.63□□□□□ -1.35
BRIP1-202ENST00000577598 SGIP1Q9BQI5 828 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 SFI1A8K8P3 1242 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 WASHC4Q2M389 1173 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 C14orf80Q86SX3 495 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 PURBQ96QR8 312 aaKnown RBP6.63□□□□□ -1.35
BRIP1-202ENST00000577598 FAM126AQ9BYI3 521 aaPredicted RBP6.63□□□□□ -1.35
BRIP1-202ENST00000577598 SPC25Q9HBM1 224 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 JAMLQ86YT9 394 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 FAM174AQ8TBP5 190 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 TRPC6Q9Y210 931 aa6.63□□□□□ -1.35
BRIP1-202ENST00000577598 ATP9BO43861 1147 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 RAD51AP2Q09MP3 1159 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 USP48Q86UV5 1035 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 FDX1P10109 184 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 MAP3K11Q16584 847 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 ATCAYQ86WG3 371 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 TBX22Q9Y458 520 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 PPP1R3GB7ZBB8 358 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 CT47B1P0C2W7 299 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-202ENST00000577598 CHRM1P11229 460 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-202ENST00000577598 CPLX3Q8WVH0 158 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 SMC4Q9NTJ3 1288 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 FBXO9Q9UK97 447 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-202ENST00000577598 EID1Q9Y6B2 187 aa6.62□□□□□ -1.35
BRIP1-202ENST00000577598 DNMT3AQ9Y6K1 912 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-202ENST00000577598 G3V3G9 751 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 PPP1R12AO14974 1030 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-202ENST00000577598 EPB41L2O43491 1005 aaKnown RBP6.61□□□□□ -1.35
BRIP1-202ENST00000577598 STAU1O95793 577 aaKnown RBP6.61□□□□□ -1.35
BRIP1-202ENST00000577598 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 MINDY4BA8MYZ0 360 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 PPP2R5EQ16537 467 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 MEI1Q5TIA1 1274 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 LMBRD2Q68DH5 695 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-202ENST00000577598 CYLDQ9NQC7 956 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 FAM13BQ9NYF5 915 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 GNEQ9Y223 722 aaKnown RBP6.61□□□□□ -1.35
BRIP1-202ENST00000577598 MAGEB6P1A0A0J9YX57 407 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 HMGB1P1B2RPK0 211 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-202ENST00000577598 IRS4O14654 1257 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-202ENST00000577598 FBXO24O75426 580 aa6.61□□□□□ -1.35
BRIP1-202ENST00000577598 KRT18P05783 430 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms