RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 RGS12O14924 1447 aa17.71■□□□□ 0.43
RAB40B-211ENST00000576359 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
RAB40B-211ENST00000576359 ZNF142P52746 1687 aaPredicted RBP17.71■□□□□ 0.43
RAB40B-211ENST00000576359 KIAA0232Q92628 1395 aa17.7■□□□□ 0.42
RAB40B-211ENST00000576359 LNPKQ9C0E8 428 aa17.7■□□□□ 0.42
RAB40B-211ENST00000576359 CHD1LQ86WJ1 897 aa17.69■□□□□ 0.42
RAB40B-211ENST00000576359 NWD1Q149M9 1564 aa17.69■□□□□ 0.42
RAB40B-211ENST00000576359 CHMP4BQ9H444 224 aaKnown RBP17.69■□□□□ 0.42
RAB40B-211ENST00000576359 RBM33Q96EV2 1170 aaKnown RBP17.68■□□□□ 0.42
RAB40B-211ENST00000576359 MIS18AQ9NYP9 233 aa17.68■□□□□ 0.42
RAB40B-211ENST00000576359 HOXC9P31274 260 aa17.68■□□□□ 0.42
RAB40B-211ENST00000576359 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
RAB40B-211ENST00000576359 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
RAB40B-211ENST00000576359 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
RAB40B-211ENST00000576359 ABTB2Q8N961 1025 aa17.66■□□□□ 0.42
RAB40B-211ENST00000576359 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
RAB40B-211ENST00000576359 INTS3Q68E01 1043 aaKnown RBP17.66■□□□□ 0.42
RAB40B-211ENST00000576359 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
RAB40B-211ENST00000576359 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
RAB40B-211ENST00000576359 ADAMTSL3P82987 1691 aa17.65■□□□□ 0.42
RAB40B-211ENST00000576359 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
RAB40B-211ENST00000576359 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
RAB40B-211ENST00000576359 PHF8Q9UPP1 1060 aa17.64■□□□□ 0.41
RAB40B-211ENST00000576359 HAP1P54257 671 aaPredicted RBP17.64■□□□□ 0.41
RAB40B-211ENST00000576359 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
RAB40B-211ENST00000576359 C22orf23Q9BZE7 217 aa17.64■□□□□ 0.41
RAB40B-211ENST00000576359 SLKQ9H2G2 1235 aaPredicted RBP17.64■□□□□ 0.41
RAB40B-211ENST00000576359 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
RAB40B-211ENST00000576359 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
RAB40B-211ENST00000576359 GSE1Q14687 1217 aa17.63■□□□□ 0.41
RAB40B-211ENST00000576359 LTN1O94822 1766 aa17.63■□□□□ 0.41
RAB40B-211ENST00000576359 ATP10DQ9P241 1426 aa17.62■□□□□ 0.41
RAB40B-211ENST00000576359 MSH6P52701 1360 aa17.62■□□□□ 0.41
RAB40B-211ENST00000576359 PTPRCP08575 1304 aa17.61■□□□□ 0.41
RAB40B-211ENST00000576359 ADGRL3Q9HAR2 1447 aa17.61■□□□□ 0.41
RAB40B-211ENST00000576359 LTV1Q96GA3 475 aaPredicted RBP17.61■□□□□ 0.41
RAB40B-211ENST00000576359 NFAT5O94916 1531 aa17.6■□□□□ 0.41
RAB40B-211ENST00000576359 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
RAB40B-211ENST00000576359 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
RAB40B-211ENST00000576359 ANTXR1Q9H6X2 564 aa17.6■□□□□ 0.41
RAB40B-211ENST00000576359 BMP2KLQ5H9B9 411 aa17.59■□□□□ 0.41
RAB40B-211ENST00000576359 G2E3Q7L622 706 aa17.59■□□□□ 0.41
RAB40B-211ENST00000576359 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
RAB40B-211ENST00000576359 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
RAB40B-211ENST00000576359 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.41
RAB40B-211ENST00000576359 USHBP1Q8N6Y0 703 aa17.58■□□□□ 0.41
RAB40B-211ENST00000576359 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
RAB40B-211ENST00000576359 MEIS3Q99687 375 aa17.57■□□□□ 0.4
RAB40B-211ENST00000576359 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
RAB40B-211ENST00000576359 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
RAB40B-211ENST00000576359 DCTPP1Q9H773 170 aa17.57■□□□□ 0.4
RAB40B-211ENST00000576359 FAM208AQ9UK61 1670 aaKnown RBP17.57■□□□□ 0.4
RAB40B-211ENST00000576359 SETD1BQ9UPS6 1966 aaKnown RBP17.56■□□□□ 0.4
RAB40B-211ENST00000576359 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
RAB40B-211ENST00000576359 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
RAB40B-211ENST00000576359 NPHP4O75161 1426 aaPredicted RBP17.56■□□□□ 0.4
RAB40B-211ENST00000576359 IP6K1Q92551 441 aa17.55■□□□□ 0.4
RAB40B-211ENST00000576359 F6X3S4 739 aa17.55■□□□□ 0.4
RAB40B-211ENST00000576359 PSME1Q06323 249 aa17.54■□□□□ 0.4
RAB40B-211ENST00000576359 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
RAB40B-211ENST00000576359 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
RAB40B-211ENST00000576359 RGPD2P0DJD1 1756 aa17.53■□□□□ 0.4
RAB40B-211ENST00000576359 PHRF1Q9P1Y6 1649 aaKnown RBP17.53■□□□□ 0.4
RAB40B-211ENST00000576359 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
RAB40B-211ENST00000576359 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
RAB40B-211ENST00000576359 GSPT1P15170 499 aaKnown RBP17.52■□□□□ 0.4
RAB40B-211ENST00000576359 RBM25P49756 843 aaKnown RBP17.52■□□□□ 0.4
RAB40B-211ENST00000576359 PLEKHM2Q8IWE5 1019 aa17.52■□□□□ 0.4
RAB40B-211ENST00000576359 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.39
RAB40B-211ENST00000576359 ORAI2Q96SN7 254 aa17.52■□□□□ 0.39
RAB40B-211ENST00000576359 TBC1D9Q6ZT07 1266 aa17.51■□□□□ 0.39
RAB40B-211ENST00000576359 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-211ENST00000576359 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
RAB40B-211ENST00000576359 TAF7Q15545 349 aaPredicted RBP17.5■□□□□ 0.39
RAB40B-211ENST00000576359 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
RAB40B-211ENST00000576359 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
RAB40B-211ENST00000576359 CEMIPQ8WUJ3 1361 aa17.49■□□□□ 0.39
RAB40B-211ENST00000576359 CCT4P50991 539 aaKnown RBP17.49■□□□□ 0.39
RAB40B-211ENST00000576359 FLIIQ13045 1269 aa17.49■□□□□ 0.39
RAB40B-211ENST00000576359 OTUD7AQ8TE49 926 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-211ENST00000576359 MED1Q15648 1581 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-211ENST00000576359 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
RAB40B-211ENST00000576359 CCDC30Q5VVM6 783 aa17.49■□□□□ 0.39
RAB40B-211ENST00000576359 KCNH5Q8NCM2 988 aa17.49■□□□□ 0.39
RAB40B-211ENST00000576359 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
RAB40B-211ENST00000576359 LRRC59Q96AG4 307 aaKnown RBP17.48■□□□□ 0.39
RAB40B-211ENST00000576359 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
RAB40B-211ENST00000576359 SLIT3O75094 1523 aa17.48■□□□□ 0.39
RAB40B-211ENST00000576359 SMARCA5O60264 1052 aaPredicted RBP17.48■□□□□ 0.39
RAB40B-211ENST00000576359 KIF2CQ99661 725 aa17.47■□□□□ 0.39
RAB40B-211ENST00000576359 TRPM3Q9HCF6 1732 aaPredicted RBP17.47■□□□□ 0.39
RAB40B-211ENST00000576359 TTC22Q5TAA0 569 aa17.47■□□□□ 0.39
RAB40B-211ENST00000576359 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
RAB40B-211ENST00000576359 FKBP5Q13451 457 aaPredicted RBP17.46■□□□□ 0.39
RAB40B-211ENST00000576359 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
RAB40B-211ENST00000576359 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.39
RAB40B-211ENST00000576359 APBB1O00213 710 aa17.46■□□□□ 0.38
RAB40B-211ENST00000576359 LMO7Q8WWI1 1683 aa17.45■□□□□ 0.38
RAB40B-211ENST00000576359 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
RAB40B-211ENST00000576359 CDC45O75419 566 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms