RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 KDRP35968 1356 aa11.97□□□□□ -0.49
SMG6-216ENST00000575176 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
SMG6-216ENST00000575176 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
SMG6-216ENST00000575176 IL2RBP14784 551 aa11.97□□□□□ -0.49
SMG6-216ENST00000575176 AMPHP49418 695 aa11.97□□□□□ -0.49
SMG6-216ENST00000575176 FAM196AQ6ZSG2 479 aa11.97□□□□□ -0.49
SMG6-216ENST00000575176 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
SMG6-216ENST00000575176 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
SMG6-216ENST00000575176 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
SMG6-216ENST00000575176 TRIM37O94972 964 aa11.96□□□□□ -0.49
SMG6-216ENST00000575176 EIF4A2Q14240 407 aaKnown RBP11.96□□□□□ -0.49
SMG6-216ENST00000575176 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
SMG6-216ENST00000575176 SIPA1L3O60292 1781 aaPredicted RBP11.96□□□□□ -0.49
SMG6-216ENST00000575176 C5P01031 1676 aa11.96□□□□□ -0.5
SMG6-216ENST00000575176 ZNF831Q5JPB2 1677 aa11.94□□□□□ -0.5
SMG6-216ENST00000575176 PDE3BQ13370 1112 aa11.94□□□□□ -0.5
SMG6-216ENST00000575176 EYA1Q99502 592 aa11.94□□□□□ -0.5
SMG6-216ENST00000575176 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
SMG6-216ENST00000575176 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
SMG6-216ENST00000575176 MRC1P22897 1456 aa11.92□□□□□ -0.5
SMG6-216ENST00000575176 KCNQ2O43526 872 aa11.92□□□□□ -0.5
SMG6-216ENST00000575176 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
SMG6-216ENST00000575176 EZH2Q15910 746 aaKnown RBP11.92□□□□□ -0.5
SMG6-216ENST00000575176 KNSTRNQ9Y448 316 aa11.92□□□□□ -0.5
SMG6-216ENST00000575176 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
SMG6-216ENST00000575176 PROM2Q8N271 834 aa11.91□□□□□ -0.5
SMG6-216ENST00000575176 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
SMG6-216ENST00000575176 KAT6BQ8WYB5 2073 aa11.91□□□□□ -0.5
SMG6-216ENST00000575176 TJP1Q07157 1748 aa11.91□□□□□ -0.5
SMG6-216ENST00000575176 EXOC5O00471 708 aa11.9□□□□□ -0.5
SMG6-216ENST00000575176 CYP27B1O15528 508 aa11.9□□□□□ -0.5
SMG6-216ENST00000575176 IL13P35225 146 aa11.9□□□□□ -0.5
SMG6-216ENST00000575176 BAG6P46379 1132 aa11.9□□□□□ -0.5
SMG6-216ENST00000575176 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
SMG6-216ENST00000575176 MORC1Q86VD1 984 aa11.9□□□□□ -0.5
SMG6-216ENST00000575176 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
SMG6-216ENST00000575176 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.51
SMG6-216ENST00000575176 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
SMG6-216ENST00000575176 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
SMG6-216ENST00000575176 PLSCR1O15162 318 aa11.88□□□□□ -0.51
SMG6-216ENST00000575176 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
SMG6-216ENST00000575176 CC2D1BQ5T0F9 858 aaKnown RBP11.88□□□□□ -0.51
SMG6-216ENST00000575176 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
SMG6-216ENST00000575176 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
SMG6-216ENST00000575176 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
SMG6-216ENST00000575176 C4BP0C0L5 1744 aa11.87□□□□□ -0.51
SMG6-216ENST00000575176 APBA3O96018 575 aa11.87□□□□□ -0.51
SMG6-216ENST00000575176 MTHFSP49914 203 aa11.86□□□□□ -0.51
SMG6-216ENST00000575176 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
SMG6-216ENST00000575176 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
SMG6-216ENST00000575176 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
SMG6-216ENST00000575176 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
SMG6-216ENST00000575176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMG6-216ENST00000575176 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
SMG6-216ENST00000575176 DDX54Q8TDD1 881 aaKnown RBP11.84□□□□□ -0.51
SMG6-216ENST00000575176 RAPGEF4Q8WZA2 1011 aa11.84□□□□□ -0.51
SMG6-216ENST00000575176 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
SMG6-216ENST00000575176 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
SMG6-216ENST00000575176 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
SMG6-216ENST00000575176 PHKG2P15735 406 aa11.83□□□□□ -0.52
SMG6-216ENST00000575176 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
SMG6-216ENST00000575176 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
SMG6-216ENST00000575176 TXNRD1Q16881 649 aa11.82□□□□□ -0.52
SMG6-216ENST00000575176 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
SMG6-216ENST00000575176 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
SMG6-216ENST00000575176 UTRNP46939 3433 aa11.8□□□□□ -0.52
SMG6-216ENST00000575176 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
SMG6-216ENST00000575176 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
SMG6-216ENST00000575176 ZNF827Q17R98 1081 aa11.8□□□□□ -0.52
SMG6-216ENST00000575176 PDGFDQ9GZP0 370 aaPredicted RBP11.8□□□□□ -0.52
SMG6-216ENST00000575176 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
SMG6-216ENST00000575176 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
SMG6-216ENST00000575176 AKT1S1Q96B36 256 aa11.78□□□□□ -0.52
SMG6-216ENST00000575176 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
SMG6-216ENST00000575176 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
SMG6-216ENST00000575176 PIGBQ92521 554 aa11.77□□□□□ -0.53
SMG6-216ENST00000575176 RSPH6AQ9H0K4 717 aa11.77□□□□□ -0.53
SMG6-216ENST00000575176 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
SMG6-216ENST00000575176 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.53
SMG6-216ENST00000575176 HMOX1P09601 288 aa11.76□□□□□ -0.53
SMG6-216ENST00000575176 KCNQ4P56696 695 aa11.76□□□□□ -0.53
SMG6-216ENST00000575176 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
SMG6-216ENST00000575176 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
SMG6-216ENST00000575176 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
SMG6-216ENST00000575176 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
SMG6-216ENST00000575176 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
SMG6-216ENST00000575176 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
SMG6-216ENST00000575176 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
SMG6-216ENST00000575176 SLC15A2Q16348 729 aa11.74□□□□□ -0.53
SMG6-216ENST00000575176 MTHFSDQ2M296 383 aaKnown RBP11.74□□□□□ -0.53
SMG6-216ENST00000575176 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
SMG6-216ENST00000575176 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
SMG6-216ENST00000575176 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
SMG6-216ENST00000575176 PNPLA7Q6ZV29 1317 aa11.74□□□□□ -0.53
SMG6-216ENST00000575176 SCN7AQ01118 1682 aa11.74□□□□□ -0.53
SMG6-216ENST00000575176 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
SMG6-216ENST00000575176 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
SMG6-216ENST00000575176 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
SMG6-216ENST00000575176 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
SMG6-216ENST00000575176 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms