RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 APBA3O96018 575 aa13.89□□□□□ -0.19
RPA1-206ENST00000573994 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
RPA1-206ENST00000573994 EZH2Q15910 746 aaKnown RBP13.89□□□□□ -0.19
RPA1-206ENST00000573994 PROM2Q8N271 834 aa13.89□□□□□ -0.19
RPA1-206ENST00000573994 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
RPA1-206ENST00000573994 PEAK1Q9H792 1746 aa13.89□□□□□ -0.19
RPA1-206ENST00000573994 TNS2Q63HR2 1409 aa13.89□□□□□ -0.19
RPA1-206ENST00000573994 FYB1O15117 783 aa13.88□□□□□ -0.19
RPA1-206ENST00000573994 CLCN6P51797 869 aa13.88□□□□□ -0.19
RPA1-206ENST00000573994 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPA1-206ENST00000573994 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
RPA1-206ENST00000573994 MARCH10Q8NA82 808 aaPredicted RBP13.88□□□□□ -0.19
RPA1-206ENST00000573994 CDCA7Q9BWT1 371 aaPredicted RBP13.88□□□□□ -0.19
RPA1-206ENST00000573994 C11orf95C9JLR9 678 aaPredicted RBP13.87□□□□□ -0.19
RPA1-206ENST00000573994 AMPHP49418 695 aa13.87□□□□□ -0.19
RPA1-206ENST00000573994 IP6K1Q92551 441 aa13.87□□□□□ -0.19
RPA1-206ENST00000573994 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
RPA1-206ENST00000573994 HOXC9P31274 260 aa13.86□□□□□ -0.19
RPA1-206ENST00000573994 PTF1AQ7RTS3 328 aa13.86□□□□□ -0.19
RPA1-206ENST00000573994 CAMKK2Q96RR4 588 aa13.86□□□□□ -0.19
RPA1-206ENST00000573994 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
RPA1-206ENST00000573994 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
RPA1-206ENST00000573994 EXOC5O00471 708 aa13.84□□□□□ -0.19
RPA1-206ENST00000573994 IL2RBP14784 551 aa13.84□□□□□ -0.19
RPA1-206ENST00000573994 R3HDM1Q15032 1099 aaKnown RBP13.84□□□□□ -0.19
RPA1-206ENST00000573994 PARD3Q8TEW0 1356 aa13.83□□□□□ -0.19
RPA1-206ENST00000573994 RREB1Q92766 1687 aa13.82□□□□□ -0.2
RPA1-206ENST00000573994 BCL9O00512 1426 aa13.81□□□□□ -0.2
RPA1-206ENST00000573994 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
RPA1-206ENST00000573994 BCL11BQ9C0K0 894 aaPredicted RBP13.81□□□□□ -0.2
RPA1-206ENST00000573994 FAM208AQ9UK61 1670 aaKnown RBP13.81□□□□□ -0.2
RPA1-206ENST00000573994 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
RPA1-206ENST00000573994 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
RPA1-206ENST00000573994 MEGF6O75095 1541 aa13.8□□□□□ -0.2
RPA1-206ENST00000573994 ACSBG1Q96GR2 724 aa13.8□□□□□ -0.2
RPA1-206ENST00000573994 EMILIN1Q9Y6C2 1016 aa13.8□□□□□ -0.2
RPA1-206ENST00000573994 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
RPA1-206ENST00000573994 FLT4P35916 1363 aa13.8□□□□□ -0.2
RPA1-206ENST00000573994 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
RPA1-206ENST00000573994 KCNQ2O43526 872 aa13.78□□□□□ -0.2
RPA1-206ENST00000573994 GABBR2O75899 941 aa13.78□□□□□ -0.2
RPA1-206ENST00000573994 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
RPA1-206ENST00000573994 INSRP06213 1382 aa13.78□□□□□ -0.2
RPA1-206ENST00000573994 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
RPA1-206ENST00000573994 PPM1GO15355 546 aaPredicted RBP13.77□□□□□ -0.21
RPA1-206ENST00000573994 TNNT2P45379 298 aaPredicted RBP13.77□□□□□ -0.21
RPA1-206ENST00000573994 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
RPA1-206ENST00000573994 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
RPA1-206ENST00000573994 PANK3Q9H999 370 aa13.77□□□□□ -0.21
RPA1-206ENST00000573994 NHSQ6T4R5 1651 aa13.76□□□□□ -0.21
RPA1-206ENST00000573994 LRP5O75197 1615 aa13.76□□□□□ -0.21
RPA1-206ENST00000573994 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
RPA1-206ENST00000573994 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
RPA1-206ENST00000573994 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
RPA1-206ENST00000573994 PLSCR1O15162 318 aa13.75□□□□□ -0.21
RPA1-206ENST00000573994 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
RPA1-206ENST00000573994 RGPD3A6NKT7 1758 aaPredicted RBP13.75□□□□□ -0.21
RPA1-206ENST00000573994 RGPD4Q7Z3J3 1758 aa13.75□□□□□ -0.21
RPA1-206ENST00000573994 KIF7Q2M1P5 1343 aa13.74□□□□□ -0.21
RPA1-206ENST00000573994 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
RPA1-206ENST00000573994 ANKRD26Q9UPS8 1709 aa13.73□□□□□ -0.21
RPA1-206ENST00000573994 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
RPA1-206ENST00000573994 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
RPA1-206ENST00000573994 POLKQ9UBT6 870 aa13.72□□□□□ -0.21
RPA1-206ENST00000573994 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.21
RPA1-206ENST00000573994 TATP17735 454 aaPredicted RBP13.71□□□□□ -0.21
RPA1-206ENST00000573994 FKBP8Q14318 412 aa13.71□□□□□ -0.21
RPA1-206ENST00000573994 SYTL4Q96C24 671 aaPredicted RBP13.71□□□□□ -0.21
RPA1-206ENST00000573994 NSD2O96028 1365 aa13.71□□□□□ -0.22
RPA1-206ENST00000573994 DOT1LQ8TEK3 1739 aa13.7□□□□□ -0.22
RPA1-206ENST00000573994 BTAF1O14981 1849 aa13.69□□□□□ -0.22
RPA1-206ENST00000573994 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
RPA1-206ENST00000573994 PRIM1P49642 420 aaKnown RBP13.69□□□□□ -0.22
RPA1-206ENST00000573994 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
RPA1-206ENST00000573994 NCAPD2Q15021 1401 aa13.69□□□□□ -0.22
RPA1-206ENST00000573994 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
RPA1-206ENST00000573994 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
RPA1-206ENST00000573994 EYA1Q99502 592 aa13.68□□□□□ -0.22
RPA1-206ENST00000573994 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
RPA1-206ENST00000573994 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
RPA1-206ENST00000573994 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
RPA1-206ENST00000573994 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
RPA1-206ENST00000573994 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
RPA1-206ENST00000573994 PAPPAQ13219 1627 aa13.66□□□□□ -0.22
RPA1-206ENST00000573994 CYP27B1O15528 508 aa13.65□□□□□ -0.22
RPA1-206ENST00000573994 KCNQ4P56696 695 aa13.65□□□□□ -0.22
RPA1-206ENST00000573994 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
RPA1-206ENST00000573994 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
RPA1-206ENST00000573994 LRRC4BQ9NT99 713 aa13.65□□□□□ -0.22
RPA1-206ENST00000573994 CASZ1Q86V15 1759 aa13.64□□□□□ -0.23
RPA1-206ENST00000573994 ZBTB7AO95365 584 aa13.64□□□□□ -0.23
RPA1-206ENST00000573994 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
RPA1-206ENST00000573994 MIER1Q8N108 512 aa13.64□□□□□ -0.23
RPA1-206ENST00000573994 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
RPA1-206ENST00000573994 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
RPA1-206ENST00000573994 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
RPA1-206ENST00000573994 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
RPA1-206ENST00000573994 SPON1Q9HCB6 807 aa13.63□□□□□ -0.23
RPA1-206ENST00000573994 TOGARAM1Q9Y4F4 1720 aa13.62□□□□□ -0.23
RPA1-206ENST00000573994 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms