RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 SDSP20132 328 aa23.08■■□□□ 1.28
SLC12A4-212ENST00000573023 THEMISQ8N1K5 641 aaPredicted RBP23.07■■□□□ 1.28
SLC12A4-212ENST00000573023 GNAI3P08754 354 aa23.07■■□□□ 1.28
SLC12A4-212ENST00000573023 TTC22Q5TAA0 569 aa23.07■■□□□ 1.28
SLC12A4-212ENST00000573023 ESCO1Q5FWF5 840 aa23.07■■□□□ 1.28
SLC12A4-212ENST00000573023 KIAA1211Q6ZU35 1233 aa23.07■■□□□ 1.28
SLC12A4-212ENST00000573023 CEP85Q6P2H3 762 aa23.06■■□□□ 1.28
SLC12A4-212ENST00000573023 EYA1Q99502 592 aa23.06■■□□□ 1.28
SLC12A4-212ENST00000573023 GNAT3A8MTJ3 354 aa23.06■■□□□ 1.28
SLC12A4-212ENST00000573023 PTPRMP28827 1452 aa23.06■■□□□ 1.28
SLC12A4-212ENST00000573023 CHL1O00533 1208 aa23.06■■□□□ 1.28
SLC12A4-212ENST00000573023 MRE11P49959 708 aa23.06■■□□□ 1.28
SLC12A4-212ENST00000573023 SKOR2Q2VWA4 1001 aaPredicted RBP23.06■■□□□ 1.28
SLC12A4-212ENST00000573023 LRRCC1Q9C099 1032 aa23.05■■□□□ 1.28
SLC12A4-212ENST00000573023 PNPLA6Q8IY17 1366 aa23.05■■□□□ 1.28
SLC12A4-212ENST00000573023 RBM25P49756 843 aaKnown RBP23.05■■□□□ 1.28
SLC12A4-212ENST00000573023 FLIIQ13045 1269 aa23.05■■□□□ 1.28
SLC12A4-212ENST00000573023 ERC2O15083 957 aa23.04■■□□□ 1.28
SLC12A4-212ENST00000573023 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.28
SLC12A4-212ENST00000573023 ZNF853P0CG23 659 aa23.03■■□□□ 1.28
SLC12A4-212ENST00000573023 ABCC4O15439 1325 aa23.03■■□□□ 1.28
SLC12A4-212ENST00000573023 CAMSAP1Q5T5Y3 1602 aa23.03■■□□□ 1.28
SLC12A4-212ENST00000573023 ANXA1P04083 346 aa23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 CAVIN1Q6NZI2 390 aaKnown RBP23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 GRPEL1Q9HAV7 217 aa23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 CD2BP2O95400 341 aaKnown RBP23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 DIP2CQ9Y2E4 1556 aa23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 LRRFIP2Q9Y608 721 aaKnown RBP23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 PTPRCP08575 1304 aa23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 FAM135BQ49AJ0 1406 aa23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 GSPT1P15170 499 aaKnown RBP23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 NUCB2P80303 420 aa23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 C9orf78Q9NZ63 289 aaPredicted RBP23.02■■□□□ 1.28
SLC12A4-212ENST00000573023 PRPF40AO75400 957 aaKnown RBP23.01■■□□□ 1.27
SLC12A4-212ENST00000573023 PTMSP20962 102 aa23.01■■□□□ 1.27
SLC12A4-212ENST00000573023 PLCB2Q00722 1185 aa23.01■■□□□ 1.27
SLC12A4-212ENST00000573023 AIMP1Q12904 312 aaKnown RBP23.01■■□□□ 1.27
SLC12A4-212ENST00000573023 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
SLC12A4-212ENST00000573023 CIZ1Q9ULV3 898 aaPredicted RBP23.01■■□□□ 1.27
SLC12A4-212ENST00000573023 ALKQ9UM73 1620 aa23.01■■□□□ 1.27
SLC12A4-212ENST00000573023 ROBO2Q9HCK4 1378 aa23■■□□□ 1.27
SLC12A4-212ENST00000573023 C1orf141Q5JVX7 400 aa23■■□□□ 1.27
SLC12A4-212ENST00000573023 SNX21Q969T3 373 aa23■■□□□ 1.27
SLC12A4-212ENST00000573023 UPF3BQ9BZI7 483 aaKnown RBP23■■□□□ 1.27
SLC12A4-212ENST00000573023 MSH6P52701 1360 aa23■■□□□ 1.27
SLC12A4-212ENST00000573023 A2ML1A8K2U0 1454 aa22.99■■□□□ 1.27
SLC12A4-212ENST00000573023 PTMAP06454 111 aaKnown RBP22.99■■□□□ 1.27
SLC12A4-212ENST00000573023 CSB-PGBD3P0DP91 1061 aa22.98■■□□□ 1.27
SLC12A4-212ENST00000573023 PIK3C2BO00750 1634 aa22.98■■□□□ 1.27
SLC12A4-212ENST00000573023 ARHGEF40Q8TER5 1519 aa22.98■■□□□ 1.27
SLC12A4-212ENST00000573023 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
SLC12A4-212ENST00000573023 SRGAP3O43295 1099 aa22.97■■□□□ 1.27
SLC12A4-212ENST00000573023 FAM43AQ8N2R8 423 aa22.97■■□□□ 1.27
SLC12A4-212ENST00000573023 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
SLC12A4-212ENST00000573023 TAF7Q15545 349 aaPredicted RBP22.97■■□□□ 1.27
SLC12A4-212ENST00000573023 PPLO60437 1756 aa22.97■■□□□ 1.27
SLC12A4-212ENST00000573023 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
SLC12A4-212ENST00000573023 MX1P20591 662 aa22.96■■□□□ 1.27
SLC12A4-212ENST00000573023 SRCIN1Q9C0H9 1055 aa22.96■■□□□ 1.27
SLC12A4-212ENST00000573023 CCDC9Q9Y3X0 531 aaKnown RBP22.96■■□□□ 1.27
SLC12A4-212ENST00000573023 TMEM2Q9UHN6 1383 aa22.96■■□□□ 1.27
SLC12A4-212ENST00000573023 KCNA6P17658 529 aa22.95■■□□□ 1.27
SLC12A4-212ENST00000573023 PDE1AP54750 535 aa22.95■■□□□ 1.27
SLC12A4-212ENST00000573023 LRRC7Q96NW7 1537 aa22.95■■□□□ 1.26
SLC12A4-212ENST00000573023 BRPF1P55201 1214 aaPredicted RBP22.95■■□□□ 1.26
SLC12A4-212ENST00000573023 MPRIPQ6WCQ1 1025 aa22.95■■□□□ 1.26
SLC12A4-212ENST00000573023 ATP7BP35670 1465 aa22.94■■□□□ 1.26
SLC12A4-212ENST00000573023 CD163L1Q9NR16 1453 aa22.93■■□□□ 1.26
SLC12A4-212ENST00000573023 PLEKHG3A1L390 1219 aa22.93■■□□□ 1.26
SLC12A4-212ENST00000573023 MSNP26038 577 aaKnown RBP22.93■■□□□ 1.26
SLC12A4-212ENST00000573023 USP26Q9BXU7 913 aa22.93■■□□□ 1.26
SLC12A4-212ENST00000573023 NASPP49321 788 aaPredicted RBP22.92■■□□□ 1.26
SLC12A4-212ENST00000573023 AATKQ6ZMQ8 1374 aa22.92■■□□□ 1.26
SLC12A4-212ENST00000573023 ZGPATQ8N5A5 531 aaKnown RBP22.92■■□□□ 1.26
SLC12A4-212ENST00000573023 LARP6Q9BRS8 491 aaKnown RBP22.92■■□□□ 1.26
SLC12A4-212ENST00000573023 BAG4O95429 457 aaKnown RBP22.91■■□□□ 1.26
SLC12A4-212ENST00000573023 DIAPH3Q9NSV4 1193 aa22.91■■□□□ 1.26
SLC12A4-212ENST00000573023 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
SLC12A4-212ENST00000573023 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
SLC12A4-212ENST00000573023 RAB3GAP1Q15042 981 aa22.91■■□□□ 1.26
SLC12A4-212ENST00000573023 RNF214Q8ND24 703 aa22.91■■□□□ 1.26
SLC12A4-212ENST00000573023 FLT4P35916 1363 aa22.91■■□□□ 1.26
SLC12A4-212ENST00000573023 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
SLC12A4-212ENST00000573023 PIK3R4Q99570 1358 aa22.9■■□□□ 1.26
SLC12A4-212ENST00000573023 PNMA6EA0A0J9YXQ4 647 aa22.89■■□□□ 1.26
SLC12A4-212ENST00000573023 BTBD11A6QL63 1104 aa22.89■■□□□ 1.25
SLC12A4-212ENST00000573023 IFIT2P09913 472 aaKnown RBP22.89■■□□□ 1.25
SLC12A4-212ENST00000573023 TTC21AQ8NDW8 1320 aa22.89■■□□□ 1.25
SLC12A4-212ENST00000573023 MYO3AQ8NEV4 1616 aa22.89■■□□□ 1.25
SLC12A4-212ENST00000573023 PI4KAP2A4QPH2 592 aa22.88■■□□□ 1.25
SLC12A4-212ENST00000573023 PI4KAP1Q8N8J0 262 aa22.88■■□□□ 1.25
SLC12A4-212ENST00000573023 PPP1R42Q7Z4L9 355 aa22.88■■□□□ 1.25
SLC12A4-212ENST00000573023 LRRC59Q96AG4 307 aaKnown RBP22.88■■□□□ 1.25
SLC12A4-212ENST00000573023 RTL1A6NKG5 1358 aa22.88■■□□□ 1.25
SLC12A4-212ENST00000573023 NLRP2Q9NX02 1062 aa22.87■■□□□ 1.25
SLC12A4-212ENST00000573023 HOXC9P31274 260 aa22.87■■□□□ 1.25
SLC12A4-212ENST00000573023 CWC27Q6UX04 472 aaKnown RBP22.87■■□□□ 1.25
SLC12A4-212ENST00000573023 TAOK2Q9UL54 1235 aa22.87■■□□□ 1.25
SLC12A4-212ENST00000573023 CHMP3Q9Y3E7 222 aa22.87■■□□□ 1.25
SLC12A4-212ENST00000573023 ZNF330Q9Y3S2 320 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms