RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
USP6-204ENST00000572949 NF2P35240 595 aa11.1□□□□□ -0.63
USP6-204ENST00000572949 CYP46A1Q9Y6A2 500 aa11.1□□□□□ -0.63
USP6-204ENST00000572949 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
USP6-204ENST00000572949 ZNF397Q8NF99 534 aaPredicted RBP11.1□□□□□ -0.63
USP6-204ENST00000572949 LRRFIP2Q9Y608 721 aaKnown RBP11.1□□□□□ -0.63
USP6-204ENST00000572949 SLC4A2P04920 1241 aa11.1□□□□□ -0.63
USP6-204ENST00000572949 MPRIPQ6WCQ1 1025 aa11.1□□□□□ -0.63
USP6-204ENST00000572949 IFIT1P09914 478 aaKnown RBP11.09□□□□□ -0.63
USP6-204ENST00000572949 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
USP6-204ENST00000572949 SLC26A8Q96RN1 970 aa11.09□□□□□ -0.63
USP6-204ENST00000572949 CTNNA2P26232 953 aa11.09□□□□□ -0.63
USP6-204ENST00000572949 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
USP6-204ENST00000572949 TAF4BQ92750 862 aa11.09□□□□□ -0.63
USP6-204ENST00000572949 FERMT1Q9BQL6 677 aa11.09□□□□□ -0.63
USP6-204ENST00000572949 PRKAR2BP31323 418 aa11.09□□□□□ -0.63
USP6-204ENST00000572949 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
USP6-204ENST00000572949 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
USP6-204ENST00000572949 RFC4P35249 363 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 AACSQ86V21 672 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 HOOK3Q86VS8 718 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 CDK19Q9BWU1 502 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 CEP131Q9UPN4 1083 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 MAP4K4O95819 1239 aaPredicted RBP11.08□□□□□ -0.64
USP6-204ENST00000572949 C22orf23Q9BZE7 217 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 CCT4P50991 539 aaKnown RBP11.08□□□□□ -0.64
USP6-204ENST00000572949 NEK4P51957 841 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 KIAA1328Q86T90 577 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 ST5P78524 1137 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 CABP5Q9NP86 173 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 RAB34Q9BZG1 259 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
USP6-204ENST00000572949 MCM2P49736 904 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 TWISTNBQ3B726 338 aaPredicted RBP11.07□□□□□ -0.64
USP6-204ENST00000572949 TSG101Q99816 390 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 PDE4AP27815 886 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 POLD1P28340 1107 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 TAF12Q16514 161 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
USP6-204ENST00000572949 CTNNBL1Q8WYA6 563 aaPredicted RBP11.07□□□□□ -0.64
USP6-204ENST00000572949 AKAP2Q9Y2D5 859 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 UTP14AQ9BVJ6 771 aaKnown RBP11.07□□□□□ -0.64
USP6-204ENST00000572949 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 MACROD2A1Z1Q3 448 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 ECM2O94769 699 aaPredicted RBP11.07□□□□□ -0.64
USP6-204ENST00000572949 CBX1P83916 185 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
USP6-204ENST00000572949 PPM1EQ8WY54 764 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 STAC3Q96MF2 364 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 LRRCC1Q9C099 1032 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 KIAA0754O94854 1291 aa11.07□□□□□ -0.64
USP6-204ENST00000572949 EXOC6Q8TAG9 804 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 LRRC45Q96CN5 670 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 DHX8Q14562 1220 aaKnown RBP11.06□□□□□ -0.64
USP6-204ENST00000572949 LEKR1Q6ZMV7 388 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 DDX23Q9BUQ8 820 aaKnown RBP11.06□□□□□ -0.64
USP6-204ENST00000572949 FIBPO43427 364 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 TMEM266Q2M3C6 531 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 VPS36Q86VN1 386 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 CKAP2LQ8IYA6 745 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 GSTTP1A0A1W2PQM5 241 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 EXOC5O00471 708 aa11.06□□□□□ -0.64
USP6-204ENST00000572949 TAF3Q5VWG9 929 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
USP6-204ENST00000572949 DHX37Q8IY37 1157 aaKnown RBP11.05□□□□□ -0.64
USP6-204ENST00000572949 HLA-DOAP06340 250 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 INCENPQ9NQS7 918 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 CNTLNQ9NXG0 1405 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 CBFA2T2O43439 604 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
USP6-204ENST00000572949 NBPF8Q3BBV2 869 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 NBPF14Q5TI25 921 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.05□□□□□ -0.64
USP6-204ENST00000572949 FAM177A1Q8N128 213 aaPredicted RBP11.05□□□□□ -0.64
USP6-204ENST00000572949 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 GOLGA6L10A0A0M3HER8 536 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 CETN1Q12798 172 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 RNF214Q8ND24 703 aa11.05□□□□□ -0.64
USP6-204ENST00000572949 PUF60Q9UHX1 559 aaKnown RBP11.05□□□□□ -0.64
USP6-204ENST00000572949 DDX46Q7L014 1031 aaKnown RBP11.04□□□□□ -0.64
USP6-204ENST00000572949 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 SLC5A1P13866 664 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 DYDC1Q8WWB3 177 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 NAPBQ9H115 298 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 CCDC39Q9UFE4 941 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 RANBP6O60518 1105 aaKnown RBP11.04□□□□□ -0.64
USP6-204ENST00000572949 ARL1P40616 181 aaPredicted RBP11.04□□□□□ -0.64
USP6-204ENST00000572949 FAM193AP78312 1265 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 NCBP1Q09161 790 aaKnown RBP11.04□□□□□ -0.64
USP6-204ENST00000572949 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
USP6-204ENST00000572949 IQCA1Q86XH1 822 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 HDAC9Q9UKV0 1011 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms