RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 RLBP1P12271 317 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 ATF3P18847 181 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 AMPHP49418 695 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 GNAI1P63096 354 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 CALD1Q05682 793 aaKnown RBP6.02□□□□□ -1.45
NDE1-204ENST00000572503 MTHFSDQ2M296 383 aaKnown RBP6.02□□□□□ -1.45
NDE1-204ENST00000572503 ALDH1L2Q3SY69 923 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 C14orf37Q86TY3 774 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 PELP1Q8IZL8 1130 aaKnown RBP6.02□□□□□ -1.45
NDE1-204ENST00000572503 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 ZNF428Q96B54 188 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 CCDC136Q96JN2 1154 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 CFAP44Q96MT7 982 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 MBIPQ9NS73 344 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 CPDO75976 1380 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 COL22A1Q8NFW1 1626 aaPredicted RBP6.02□□□□□ -1.45
NDE1-204ENST00000572503 CEMIPQ8WUJ3 1361 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 SHANK3Q9BYB0 1731 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 PARP4Q9UKK3 1724 aaKnown RBP6.02□□□□□ -1.45
NDE1-204ENST00000572503 SOS2Q07890 1332 aaPredicted RBP6.01□□□□□ -1.45
NDE1-204ENST00000572503 NPHP3Q7Z494 1330 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 RGS12O14924 1447 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 AHDC1Q5TGY3 1603 aaPredicted RBP6.01□□□□□ -1.45
NDE1-204ENST00000572503 SOX12O15370 315 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 PAK3O75914 559 aaPredicted RBP6.01□□□□□ -1.45
NDE1-204ENST00000572503 XPCQ01831 940 aaPredicted RBP6.01□□□□□ -1.45
NDE1-204ENST00000572503 DCTN1Q14203 1278 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 NBPF6Q5VWK0 638 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 BRINP3Q76B58 766 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 PANK1Q8TE04 598 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 NBPF4Q96M43 638 aa6.01□□□□□ -1.45
NDE1-204ENST00000572503 NEFMP07197 916 aa6□□□□□ -1.45
NDE1-204ENST00000572503 TRIM27P14373 513 aa6□□□□□ -1.45
NDE1-204ENST00000572503 AAMPQ13685 434 aa6□□□□□ -1.45
NDE1-204ENST00000572503 MRPL50Q8N5N7 158 aaKnown RBP6□□□□□ -1.45
NDE1-204ENST00000572503 TSPYL6Q8N831 410 aa6□□□□□ -1.45
NDE1-204ENST00000572503 C8orf58Q8NAV2 365 aa6□□□□□ -1.45
NDE1-204ENST00000572503 GAS2L2Q8NHY3 880 aa6□□□□□ -1.45
NDE1-204ENST00000572503 DDX17Q92841 729 aaKnown RBP6□□□□□ -1.45
NDE1-204ENST00000572503 AXIN2Q9Y2T1 843 aa6□□□□□ -1.45
NDE1-204ENST00000572503 MAP3K5Q99683 1374 aa6□□□□□ -1.45
NDE1-204ENST00000572503 GLI3P10071 1580 aa6□□□□□ -1.45
NDE1-204ENST00000572503 ERBB3P21860 1342 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 ROBO1Q9Y6N7 1651 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 MRC1P22897 1456 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 MCM10Q7L590 875 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 IL17REQ8NFR9 667 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 BCL2L13Q9BXK5 485 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 BABAM1Q9NWV8 329 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 PCDH10Q9P2E7 1040 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 WNK3Q9BYP7 1800 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 COL16A1Q07092 1604 aaPredicted RBP5.99□□□□□ -1.45
NDE1-204ENST00000572503 ABCC4O15439 1325 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 KIF16BQ96L93 1317 aa5.99□□□□□ -1.45
NDE1-204ENST00000572503 MVPQ14764 893 aaKnown RBP5.98□□□□□ -1.45
NDE1-204ENST00000572503 ZKSCAN2Q63HK3 967 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 ATF7IPQ6VMQ6 1270 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 CENPQQ7L2Z9 268 aaPredicted RBP5.98□□□□□ -1.45
NDE1-204ENST00000572503 USHBP1Q8N6Y0 703 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 ANKRD24Q8TF21 1146 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 ARHGAP45Q92619 1136 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 LRRC59Q96AG4 307 aaKnown RBP5.98□□□□□ -1.45
NDE1-204ENST00000572503 CLUAP1Q96AJ1 413 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 SMC4Q9NTJ3 1288 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 COG6Q9Y2V7 657 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 MEGF6O75095 1541 aa5.98□□□□□ -1.45
NDE1-204ENST00000572503 HEG1Q9ULI3 1381 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 PAPPAQ13219 1627 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 POTEMA6NI47 508 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 GNAT3A8MTJ3 354 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 MS4A1P11836 297 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 KRT24Q2M2I5 525 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 TWISTNBQ3B726 338 aaPredicted RBP5.97□□□□□ -1.45
NDE1-204ENST00000572503 DZIP1LQ8IYY4 767 aaKnown RBP5.97□□□□□ -1.45
NDE1-204ENST00000572503 LTV1Q96GA3 475 aaPredicted RBP5.97□□□□□ -1.45
NDE1-204ENST00000572503 SLAIN2Q9P270 581 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 NOB1Q9ULX3 412 aaKnown RBP5.97□□□□□ -1.45
NDE1-204ENST00000572503 PCDHB15Q9Y5E8 787 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 C5P01031 1676 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 PLCH1Q4KWH8 1693 aa5.97□□□□□ -1.45
NDE1-204ENST00000572503 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
NDE1-204ENST00000572503 COL5A2P05997 1499 aaPredicted RBP5.96□□□□□ -1.45
NDE1-204ENST00000572503 COL14A1Q05707 1796 aaKnown RBP5.96□□□□□ -1.46
NDE1-204ENST00000572503 UBR2Q8IWV8 1755 aa5.96□□□□□ -1.46
NDE1-204ENST00000572503 IGHDP01880 384 aa5.96□□□□□ -1.46
NDE1-204ENST00000572503 TMEM57Q8N5G2 664 aa5.96□□□□□ -1.46
NDE1-204ENST00000572503 FRAT1Q92837 279 aaPredicted RBP5.96□□□□□ -1.46
NDE1-204ENST00000572503 ZBTB40Q9NUA8 1239 aa5.96□□□□□ -1.46
NDE1-204ENST00000572503 RBM19Q9Y4C8 960 aaKnown RBP5.96□□□□□ -1.46
NDE1-204ENST00000572503 KDM6AO15550 1401 aaPredicted RBP5.96□□□□□ -1.46
NDE1-204ENST00000572503 NRAPQ86VF7 1730 aa5.96□□□□□ -1.46
NDE1-204ENST00000572503 TOGARAM1Q9Y4F4 1720 aa5.96□□□□□ -1.46
NDE1-204ENST00000572503 LAMB4A4D0S4 1761 aa5.95□□□□□ -1.46
NDE1-204ENST00000572503 TCERG1O14776 1098 aaKnown RBP5.95□□□□□ -1.46
NDE1-204ENST00000572503 IPO8O15397 1037 aaKnown RBP5.95□□□□□ -1.46
NDE1-204ENST00000572503 ZC3H6P61129 1189 aaKnown RBP5.95□□□□□ -1.46
NDE1-204ENST00000572503 AMOTQ4VCS5 1084 aa5.95□□□□□ -1.46
NDE1-204ENST00000572503 AKAP4Q5JQC9 854 aa5.95□□□□□ -1.46
NDE1-204ENST00000572503 CABLES1Q8TDN4 633 aa5.95□□□□□ -1.46
NDE1-204ENST00000572503 RBM42Q9BTD8 480 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms