RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ZCRB1Q8TBF4 217 aaKnown RBP18.86■□□□□ 0.61
RPAIN-211ENST00000572174 DOT1LQ8TEK3 1739 aa18.86■□□□□ 0.61
RPAIN-211ENST00000572174 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
RPAIN-211ENST00000572174 RREB1Q92766 1687 aa18.85■□□□□ 0.61
RPAIN-211ENST00000572174 IGSF1Q8N6C5 1336 aa18.84■□□□□ 0.61
RPAIN-211ENST00000572174 EYA1Q99502 592 aa18.84■□□□□ 0.61
RPAIN-211ENST00000572174 BTAF1O14981 1849 aa18.84■□□□□ 0.61
RPAIN-211ENST00000572174 MTHFSP49914 203 aa18.83■□□□□ 0.6
RPAIN-211ENST00000572174 USHBP1Q8N6Y0 703 aa18.83■□□□□ 0.6
RPAIN-211ENST00000572174 CFAP53Q96M91 514 aa18.83■□□□□ 0.6
RPAIN-211ENST00000572174 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
RPAIN-211ENST00000572174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.62e-8■□□□□ 9.4
RPAIN-211ENST00000572174 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
RPAIN-211ENST00000572174 APBA3O96018 575 aa18.81■□□□□ 0.6
RPAIN-211ENST00000572174 DDX54Q8TDD1 881 aaKnown RBP18.8■□□□□ 0.6
RPAIN-211ENST00000572174 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
RPAIN-211ENST00000572174 NUP188Q5SRE5 1749 aa18.79■□□□□ 0.6
RPAIN-211ENST00000572174 ITGB4P16144 1822 aa18.79■□□□□ 0.6
RPAIN-211ENST00000572174 DEFB132Q7Z7B7 95 aa18.78■□□□□ 0.6
RPAIN-211ENST00000572174 KDRP35968 1356 aa18.78■□□□□ 0.6
RPAIN-211ENST00000572174 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.6
RPAIN-211ENST00000572174 PLSCR1O15162 318 aa18.77■□□□□ 0.6
RPAIN-211ENST00000572174 IL13P35225 146 aa18.77■□□□□ 0.6
RPAIN-211ENST00000572174 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.6
RPAIN-211ENST00000572174 AMOTQ4VCS5 1084 aa18.77■□□□□ 0.6
RPAIN-211ENST00000572174 COL3A1P02461 1466 aaPredicted RBP18.77■□□□□ 0.59
RPAIN-211ENST00000572174 EN1Q05925 392 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-211ENST00000572174 HMGB2P26583 209 aaKnown RBP18.75■□□□□ 0.59
RPAIN-211ENST00000572174 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
RPAIN-211ENST00000572174 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
RPAIN-211ENST00000572174 RALBP1Q15311 655 aa18.74■□□□□ 0.59
RPAIN-211ENST00000572174 PLEKHO1Q53GL0 409 aaPredicted RBP18.74■□□□□ 0.59
RPAIN-211ENST00000572174 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
RPAIN-211ENST00000572174 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
RPAIN-211ENST00000572174 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
RPAIN-211ENST00000572174 CAMKK2Q96RR4 588 aa18.73■□□□□ 0.59
RPAIN-211ENST00000572174 LY75O60449 1722 aa18.73■□□□□ 0.59
RPAIN-211ENST00000572174 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
RPAIN-211ENST00000572174 SULT6B1Q6IMI4 303 aa18.72■□□□□ 0.59
RPAIN-211ENST00000572174 SCN11AQ9UI33 1791 aa18.71■□□□□ 0.59
RPAIN-211ENST00000572174 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
RPAIN-211ENST00000572174 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
RPAIN-211ENST00000572174 EZH2Q15910 746 aaKnown RBP18.7■□□□□ 0.58
RPAIN-211ENST00000572174 C1orf141Q5JVX7 400 aa18.7■□□□□ 0.58
RPAIN-211ENST00000572174 NBPF14Q5TI25 921 aa18.7■□□□□ 0.58
RPAIN-211ENST00000572174 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
RPAIN-211ENST00000572174 CYP27B1O15528 508 aa18.69■□□□□ 0.58
RPAIN-211ENST00000572174 ZNF316A6NFI3 1004 aaPredicted RBP18.68■□□□□ 0.58
RPAIN-211ENST00000572174 U2SURPO15042 1029 aaKnown RBP18.68■□□□□ 0.58
RPAIN-211ENST00000572174 KCNQ2O43526 872 aa18.68■□□□□ 0.58
RPAIN-211ENST00000572174 PHKG2P15735 406 aa18.68■□□□□ 0.58
RPAIN-211ENST00000572174 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
RPAIN-211ENST00000572174 ZNF530Q6P9A1 599 aaPredicted RBP18.67■□□□□ 0.58
RPAIN-211ENST00000572174 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
RPAIN-211ENST00000572174 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
RPAIN-211ENST00000572174 SLC27A3Q5K4L6 730 aa18.65■□□□□ 0.58
RPAIN-211ENST00000572174 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
RPAIN-211ENST00000572174 QSER1Q2KHR3 1735 aa18.64■□□□□ 0.57
RPAIN-211ENST00000572174 NEFMP07197 916 aa18.64■□□□□ 0.57
RPAIN-211ENST00000572174 HMOX1P09601 288 aa18.64■□□□□ 0.57
RPAIN-211ENST00000572174 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
RPAIN-211ENST00000572174 SMARCC1Q92922 1105 aaPredicted RBP18.64■□□□□ 0.57
RPAIN-211ENST00000572174 TAF1LQ8IZX4 1826 aa18.64■□□□□ 0.57
RPAIN-211ENST00000572174 ERVV-2B6SEH9 535 aa18.63■□□□□ 0.57
RPAIN-211ENST00000572174 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
RPAIN-211ENST00000572174 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
RPAIN-211ENST00000572174 C5P01031 1676 aa18.63■□□□□ 0.57
RPAIN-211ENST00000572174 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
RPAIN-211ENST00000572174 PTF1AQ7RTS3 328 aa18.62■□□□□ 0.57
RPAIN-211ENST00000572174 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
RPAIN-211ENST00000572174 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
RPAIN-211ENST00000572174 ZNF831Q5JPB2 1677 aa18.61■□□□□ 0.57
RPAIN-211ENST00000572174 ADAMTS7Q9UKP4 1686 aa18.61■□□□□ 0.57
RPAIN-211ENST00000572174 FCHSD2O94868 740 aa18.61■□□□□ 0.57
RPAIN-211ENST00000572174 U2AF1L5P0DN76 240 aaPredicted RBP18.61■□□□□ 0.57
RPAIN-211ENST00000572174 U2AF1Q01081 240 aaKnown RBP eCLIP18.61■□□□□ 0.57
RPAIN-211ENST00000572174 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
RPAIN-211ENST00000572174 LRP5O75197 1615 aa18.6■□□□□ 0.57
RPAIN-211ENST00000572174 STK32BQ9NY57 414 aa18.59■□□□□ 0.57
RPAIN-211ENST00000572174 KDM6AO15550 1401 aaPredicted RBP18.58■□□□□ 0.57
RPAIN-211ENST00000572174 PALLDQ8WX93 1383 aa18.58■□□□□ 0.57
RPAIN-211ENST00000572174 MRC1P22897 1456 aa18.58■□□□□ 0.56
RPAIN-211ENST00000572174 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
RPAIN-211ENST00000572174 CABP4P57796 275 aa18.57■□□□□ 0.56
RPAIN-211ENST00000572174 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
RPAIN-211ENST00000572174 PRKRIP1Q9H875 184 aaPredicted RBP18.57■□□□□ 0.56
RPAIN-211ENST00000572174 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
RPAIN-211ENST00000572174 PRKAR2BP31323 418 aa18.56■□□□□ 0.56
RPAIN-211ENST00000572174 R3HDM1Q15032 1099 aaKnown RBP18.56■□□□□ 0.56
RPAIN-211ENST00000572174 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
RPAIN-211ENST00000572174 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
RPAIN-211ENST00000572174 PROM2Q8N271 834 aa18.55■□□□□ 0.56
RPAIN-211ENST00000572174 PIGBQ92521 554 aa18.55■□□□□ 0.56
RPAIN-211ENST00000572174 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-211ENST00000572174 CASZ1Q86V15 1759 aa18.55■□□□□ 0.56
RPAIN-211ENST00000572174 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
RPAIN-211ENST00000572174 CICQ96RK0 1608 aaPredicted RBP18.54■□□□□ 0.56
RPAIN-211ENST00000572174 PSDA5PKW4 1024 aaPredicted RBP18.53■□□□□ 0.56
RPAIN-211ENST00000572174 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
RPAIN-211ENST00000572174 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms