RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
SMG6-209ENST00000571442 TRIM37O94972 964 aa9.47□□□□□ -0.89
SMG6-209ENST00000571442 DEFB132Q7Z7B7 95 aa9.47□□□□□ -0.89
SMG6-209ENST00000571442 TOGARAM1Q9Y4F4 1720 aa9.47□□□□□ -0.89
SMG6-209ENST00000571442 DOT1LQ8TEK3 1739 aa9.46□□□□□ -0.89
SMG6-209ENST00000571442 KDRP35968 1356 aa9.46□□□□□ -0.9
SMG6-209ENST00000571442 BCL9O00512 1426 aa9.46□□□□□ -0.9
SMG6-209ENST00000571442 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 CYP27B1O15528 508 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 KCNQ2O43526 872 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 DIAPH1O60610 1272 aaKnown RBP9.45□□□□□ -0.9
SMG6-209ENST00000571442 HMOX1P09601 288 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 TATP17735 454 aaPredicted RBP9.45□□□□□ -0.9
SMG6-209ENST00000571442 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 FAM196AQ6ZSG2 479 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 ZCRB1Q8TBF4 217 aaKnown RBP9.45□□□□□ -0.9
SMG6-209ENST00000571442 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
SMG6-209ENST00000571442 RAPGEF4Q8WZA2 1011 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
SMG6-209ENST00000571442 KAT6BQ8WYB5 2073 aa9.44□□□□□ -0.9
SMG6-209ENST00000571442 BTAF1O14981 1849 aa9.43□□□□□ -0.9
SMG6-209ENST00000571442 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
SMG6-209ENST00000571442 PRKRIP1Q9H875 184 aaPredicted RBP9.43□□□□□ -0.9
SMG6-209ENST00000571442 ITGB4P16144 1822 aa9.42□□□□□ -0.9
SMG6-209ENST00000571442 LRP5O75197 1615 aa9.42□□□□□ -0.9
SMG6-209ENST00000571442 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
SMG6-209ENST00000571442 RALBP1Q15311 655 aa9.42□□□□□ -0.9
SMG6-209ENST00000571442 EZH2Q15910 746 aaKnown RBP9.42□□□□□ -0.9
SMG6-209ENST00000571442 CCDC184Q52MB2 194 aa9.42□□□□□ -0.9
SMG6-209ENST00000571442 VIRMAQ69YN4 1812 aaKnown RBP9.42□□□□□ -0.9
SMG6-209ENST00000571442 RREB1Q92766 1687 aa9.42□□□□□ -0.9
SMG6-209ENST00000571442 MYBBP1AQ9BQG0 1328 aaKnown RBP9.41□□□□□ -0.9
SMG6-209ENST00000571442 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
SMG6-209ENST00000571442 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
SMG6-209ENST00000571442 PHKG2P15735 406 aa9.41□□□□□ -0.9
SMG6-209ENST00000571442 BAG6P46379 1132 aa9.41□□□□□ -0.9
SMG6-209ENST00000571442 CAMKK2Q96RR4 588 aa9.41□□□□□ -0.9
SMG6-209ENST00000571442 KDM6AO15550 1401 aaPredicted RBP9.4□□□□□ -0.9
SMG6-209ENST00000571442 NUP188Q5SRE5 1749 aa9.4□□□□□ -0.9
SMG6-209ENST00000571442 APBA3O96018 575 aa9.4□□□□□ -0.9
SMG6-209ENST00000571442 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
SMG6-209ENST00000571442 MTHFSDQ2M296 383 aaKnown RBP9.4□□□□□ -0.9
SMG6-209ENST00000571442 PROM2Q8N271 834 aa9.4□□□□□ -0.9
SMG6-209ENST00000571442 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
SMG6-209ENST00000571442 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
SMG6-209ENST00000571442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMG6-209ENST00000571442 NKX1-1Q15270 411 aaPredicted RBP9.39□□□□□ -0.91
SMG6-209ENST00000571442 PHACTR3Q96KR7 559 aa9.39□□□□□ -0.91
SMG6-209ENST00000571442 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
SMG6-209ENST00000571442 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
SMG6-209ENST00000571442 SCN11AQ9UI33 1791 aa9.39□□□□□ -0.91
SMG6-209ENST00000571442 RGPD3A6NKT7 1758 aaPredicted RBP9.38□□□□□ -0.91
SMG6-209ENST00000571442 RGPD4Q7Z3J3 1758 aa9.38□□□□□ -0.91
SMG6-209ENST00000571442 U2AF1L5P0DN76 240 aaPredicted RBP9.38□□□□□ -0.91
SMG6-209ENST00000571442 PRKAR2BP31323 418 aa9.38□□□□□ -0.91
SMG6-209ENST00000571442 U2AF1Q01081 240 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG6-209ENST00000571442 PLEKHO1Q53GL0 409 aaPredicted RBP9.38□□□□□ -0.91
SMG6-209ENST00000571442 ZNF530Q6P9A1 599 aaPredicted RBP9.38□□□□□ -0.91
SMG6-209ENST00000571442 IFNL2Q8IZJ0 200 aa9.38□□□□□ -0.91
SMG6-209ENST00000571442 ADAMTS7Q9UKP4 1686 aa9.38□□□□□ -0.91
SMG6-209ENST00000571442 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
SMG6-209ENST00000571442 LY75O60449 1722 aa9.37□□□□□ -0.91
SMG6-209ENST00000571442 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
SMG6-209ENST00000571442 MPRIPQ6WCQ1 1025 aa9.37□□□□□ -0.91
SMG6-209ENST00000571442 SYTL4Q96C24 671 aaPredicted RBP9.37□□□□□ -0.91
SMG6-209ENST00000571442 LGR6Q9HBX8 967 aa9.37□□□□□ -0.91
SMG6-209ENST00000571442 DLG5Q8TDM6 1919 aa9.37□□□□□ -0.91
SMG6-209ENST00000571442 PLSCR1O15162 318 aa9.36□□□□□ -0.91
SMG6-209ENST00000571442 KCNQ4P56696 695 aa9.36□□□□□ -0.91
SMG6-209ENST00000571442 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
SMG6-209ENST00000571442 PIGBQ92521 554 aa9.36□□□□□ -0.91
SMG6-209ENST00000571442 PLEKHF1Q96S99 279 aa9.36□□□□□ -0.91
SMG6-209ENST00000571442 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
SMG6-209ENST00000571442 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
SMG6-209ENST00000571442 TXNRD1Q16881 649 aa9.35□□□□□ -0.91
SMG6-209ENST00000571442 ANO8Q9HCE9 1232 aaPredicted RBP9.35□□□□□ -0.91
SMG6-209ENST00000571442 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
SMG6-209ENST00000571442 FCHSD2O94868 740 aa9.34□□□□□ -0.91
SMG6-209ENST00000571442 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.91
SMG6-209ENST00000571442 IL17REQ8NFR9 667 aa9.34□□□□□ -0.91
SMG6-209ENST00000571442 SIPA1L3O60292 1781 aaPredicted RBP9.34□□□□□ -0.91
SMG6-209ENST00000571442 MRC1P22897 1456 aa9.34□□□□□ -0.91
SMG6-209ENST00000571442 RNMTO43148 476 aaKnown RBP9.33□□□□□ -0.92
SMG6-209ENST00000571442 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 CCDC146Q8IYE0 955 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 ASAP1Q9ULH1 1129 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 MAP3K5Q99683 1374 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 TAF1LQ8IZX4 1826 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
SMG6-209ENST00000571442 ANP32CO43423 234 aa9.32□□□□□ -0.92
SMG6-209ENST00000571442 DCTN1Q14203 1278 aa9.32□□□□□ -0.92
SMG6-209ENST00000571442 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
SMG6-209ENST00000571442 SLC4A9Q96Q91 983 aa9.32□□□□□ -0.92
SMG6-209ENST00000571442 ATG3Q9NT62 314 aa9.32□□□□□ -0.92
SMG6-209ENST00000571442 PALLDQ8WX93 1383 aa9.32□□□□□ -0.92
SMG6-209ENST00000571442 ERVV-2B6SEH9 535 aa9.31□□□□□ -0.92
SMG6-209ENST00000571442 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
SMG6-209ENST00000571442 ZNF827Q17R98 1081 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms