RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 OFD1O75665 1012 aa17.98■□□□□ 0.47
ITGA3-216ENST00000570989 AMOTL2Q9Y2J4 779 aa17.97■□□□□ 0.47
ITGA3-216ENST00000570989 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
ITGA3-216ENST00000570989 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
ITGA3-216ENST00000570989 ANKLE2Q86XL3 938 aa17.97■□□□□ 0.47
ITGA3-216ENST00000570989 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
ITGA3-216ENST00000570989 GCC1Q96CN9 775 aa17.97■□□□□ 0.47
ITGA3-216ENST00000570989 XRN1Q8IZH2 1706 aaKnown RBP17.97■□□□□ 0.47
ITGA3-216ENST00000570989 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
ITGA3-216ENST00000570989 C1orf115Q9H7X2 142 aa17.96■□□□□ 0.47
ITGA3-216ENST00000570989 DDX49Q9Y6V7 483 aaKnown RBP17.96■□□□□ 0.47
ITGA3-216ENST00000570989 PDCL3Q9H2J4 239 aa17.95■□□□□ 0.46
ITGA3-216ENST00000570989 MAP2P11137 1827 aaKnown RBP17.95■□□□□ 0.46
ITGA3-216ENST00000570989 ZNF445P59923 1031 aa17.95■□□□□ 0.46
ITGA3-216ENST00000570989 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
ITGA3-216ENST00000570989 GOLGA6L22H0YM25 854 aa17.94■□□□□ 0.46
ITGA3-216ENST00000570989 NME9Q86XW9 330 aa17.94■□□□□ 0.46
ITGA3-216ENST00000570989 NRKQ7Z2Y5 1582 aa17.94■□□□□ 0.46
ITGA3-216ENST00000570989 NPHP4O75161 1426 aaPredicted RBP17.94■□□□□ 0.46
ITGA3-216ENST00000570989 LRRC7Q96NW7 1537 aa17.94■□□□□ 0.46
ITGA3-216ENST00000570989 CYP2E1P05181 493 aaPredicted RBP17.93■□□□□ 0.46
ITGA3-216ENST00000570989 CDC45O75419 566 aa17.92■□□□□ 0.46
ITGA3-216ENST00000570989 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
ITGA3-216ENST00000570989 FBLN1P23142 703 aa17.92■□□□□ 0.46
ITGA3-216ENST00000570989 PDE4CQ08493 712 aa17.92■□□□□ 0.46
ITGA3-216ENST00000570989 POLKQ9UBT6 870 aa17.92■□□□□ 0.46
ITGA3-216ENST00000570989 DIAPH1O60610 1272 aaKnown RBP17.92■□□□□ 0.46
ITGA3-216ENST00000570989 FGD1P98174 961 aa17.92■□□□□ 0.46
ITGA3-216ENST00000570989 NUTM2FA1L443 756 aa17.91■□□□□ 0.46
ITGA3-216ENST00000570989 MRPL50Q8N5N7 158 aaKnown RBP17.91■□□□□ 0.46
ITGA3-216ENST00000570989 LMBRD1Q9NUN5 540 aa17.91■□□□□ 0.46
ITGA3-216ENST00000570989 ZSCAN23Q3MJ62 389 aa17.91■□□□□ 0.46
ITGA3-216ENST00000570989 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.91■□□□□ 0.46
ITGA3-216ENST00000570989 ZRANB1Q9UGI0 708 aa17.91■□□□□ 0.46
ITGA3-216ENST00000570989 TERF1P54274 439 aa17.9■□□□□ 0.46
ITGA3-216ENST00000570989 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.9■□□□□ 0.46
ITGA3-216ENST00000570989 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
ITGA3-216ENST00000570989 PKP1Q13835 747 aa17.9■□□□□ 0.46
ITGA3-216ENST00000570989 MCTP1Q6DN14 999 aa17.9■□□□□ 0.46
ITGA3-216ENST00000570989 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
ITGA3-216ENST00000570989 RBSNQ9H1K0 784 aa17.9■□□□□ 0.46
ITGA3-216ENST00000570989 ABCC4O15439 1325 aa17.9■□□□□ 0.46
ITGA3-216ENST00000570989 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
ITGA3-216ENST00000570989 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.46
ITGA3-216ENST00000570989 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
ITGA3-216ENST00000570989 CAVIN1Q6NZI2 390 aaKnown RBP17.89■□□□□ 0.45
ITGA3-216ENST00000570989 ARHGAP45Q92619 1136 aa17.89■□□□□ 0.45
ITGA3-216ENST00000570989 ANP32BQ92688 251 aaKnown RBP17.89■□□□□ 0.45
ITGA3-216ENST00000570989 PLEKHG3A1L390 1219 aa17.89■□□□□ 0.45
ITGA3-216ENST00000570989 VAMP4O75379 141 aa17.89■□□□□ 0.45
ITGA3-216ENST00000570989 MSNP26038 577 aaKnown RBP17.89■□□□□ 0.45
ITGA3-216ENST00000570989 RABEP1Q15276 862 aa17.89■□□□□ 0.45
ITGA3-216ENST00000570989 HS1BP3Q53T59 392 aa17.89■□□□□ 0.45
ITGA3-216ENST00000570989 COG3Q96JB2 828 aa17.89■□□□□ 0.45
ITGA3-216ENST00000570989 ACEP12821 1306 aa17.89■□□□□ 0.45
ITGA3-216ENST00000570989 USP6P35125 1406 aa17.88■□□□□ 0.45
ITGA3-216ENST00000570989 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
ITGA3-216ENST00000570989 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
ITGA3-216ENST00000570989 PLEKHM2Q8IWE5 1019 aa17.87■□□□□ 0.45
ITGA3-216ENST00000570989 NOL7Q9UMY1 257 aaKnown RBP17.87■□□□□ 0.45
ITGA3-216ENST00000570989 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
ITGA3-216ENST00000570989 KCNA6P17658 529 aa17.87■□□□□ 0.45
ITGA3-216ENST00000570989 LTBP4Q8N2S1 1624 aa17.87■□□□□ 0.45
ITGA3-216ENST00000570989 ZNF500O60304 480 aaPredicted RBP17.86■□□□□ 0.45
ITGA3-216ENST00000570989 NUCB2P80303 420 aa17.86■□□□□ 0.45
ITGA3-216ENST00000570989 TTC21BQ7Z4L5 1316 aa17.86■□□□□ 0.45
ITGA3-216ENST00000570989 FCHSD2O94868 740 aa17.85■□□□□ 0.45
ITGA3-216ENST00000570989 PDIA4P13667 645 aaKnown RBP17.85■□□□□ 0.45
ITGA3-216ENST00000570989 PRIM1P49642 420 aaKnown RBP17.85■□□□□ 0.45
ITGA3-216ENST00000570989 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
ITGA3-216ENST00000570989 THUMPD2Q9BTF0 503 aaKnown RBP17.85■□□□□ 0.45
ITGA3-216ENST00000570989 USP26Q9BXU7 913 aa17.85■□□□□ 0.45
ITGA3-216ENST00000570989 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
ITGA3-216ENST00000570989 OVOS2A0A0J9YW53 1432 aa17.85■□□□□ 0.45
ITGA3-216ENST00000570989 OVOS2Q6IE36 1432 aa17.85■□□□□ 0.45
ITGA3-216ENST00000570989 RBM10P98175 930 aaKnown RBP17.84■□□□□ 0.45
ITGA3-216ENST00000570989 GPT2Q8TD30 523 aa17.84■□□□□ 0.45
ITGA3-216ENST00000570989 CHD2O14647 1828 aaKnown RBP17.84■□□□□ 0.45
ITGA3-216ENST00000570989 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
ITGA3-216ENST00000570989 ZDHHC9Q9Y397 364 aa17.84■□□□□ 0.45
ITGA3-216ENST00000570989 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
ITGA3-216ENST00000570989 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.45
ITGA3-216ENST00000570989 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.45
ITGA3-216ENST00000570989 SSH2Q76I76 1423 aa17.83■□□□□ 0.45
ITGA3-216ENST00000570989 TTC22Q5TAA0 569 aa17.83■□□□□ 0.44
ITGA3-216ENST00000570989 RBM27Q9P2N5 1060 aaKnown RBP17.83■□□□□ 0.44
ITGA3-216ENST00000570989 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
ITGA3-216ENST00000570989 PHACTR3Q96KR7 559 aa17.82■□□□□ 0.44
ITGA3-216ENST00000570989 XPCQ01831 940 aaPredicted RBP17.82■□□□□ 0.44
ITGA3-216ENST00000570989 ZGPATQ8N5A5 531 aaKnown RBP17.82■□□□□ 0.44
ITGA3-216ENST00000570989 FMN2Q9NZ56 1722 aa17.82■□□□□ 0.44
ITGA3-216ENST00000570989 XIRP1Q702N8 1843 aaKnown RBP17.81■□□□□ 0.44
ITGA3-216ENST00000570989 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
ITGA3-216ENST00000570989 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
ITGA3-216ENST00000570989 IL13P35225 146 aa17.8■□□□□ 0.44
ITGA3-216ENST00000570989 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
ITGA3-216ENST00000570989 C16orf71Q8IYS4 520 aaPredicted RBP17.8■□□□□ 0.44
ITGA3-216ENST00000570989 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
ITGA3-216ENST00000570989 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
ITGA3-216ENST00000570989 CHAMP1Q96JM3 812 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms