RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 MICALL2Q8IY33 904 aa12.89□□□□□ -0.35
RBFOX1-220ENST00000570188 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
RBFOX1-220ENST00000570188 DSG2Q14126 1118 aa12.88□□□□□ -0.35
RBFOX1-220ENST00000570188 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-220ENST00000570188 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
RBFOX1-220ENST00000570188 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
RBFOX1-220ENST00000570188 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
RBFOX1-220ENST00000570188 DPYSL4O14531 572 aa12.87□□□□□ -0.35
RBFOX1-220ENST00000570188 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
RBFOX1-220ENST00000570188 ORAI2Q96SN7 254 aa12.87□□□□□ -0.35
RBFOX1-220ENST00000570188 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
RBFOX1-220ENST00000570188 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-220ENST00000570188 FBLN1P23142 703 aa12.86□□□□□ -0.35
RBFOX1-220ENST00000570188 PSME1Q06323 249 aa12.86□□□□□ -0.35
RBFOX1-220ENST00000570188 PDCD7Q8N8D1 485 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-220ENST00000570188 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
RBFOX1-220ENST00000570188 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
RBFOX1-220ENST00000570188 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-220ENST00000570188 RRS1Q15050 365 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-220ENST00000570188 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
RBFOX1-220ENST00000570188 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-220ENST00000570188 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
RBFOX1-220ENST00000570188 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
RBFOX1-220ENST00000570188 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
RBFOX1-220ENST00000570188 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
RBFOX1-220ENST00000570188 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
RBFOX1-220ENST00000570188 NFAT5O94916 1531 aa12.83□□□□□ -0.35
RBFOX1-220ENST00000570188 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.36
RBFOX1-220ENST00000570188 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.36
RBFOX1-220ENST00000570188 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
RBFOX1-220ENST00000570188 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
RBFOX1-220ENST00000570188 SLIT3O75094 1523 aa12.83□□□□□ -0.36
RBFOX1-220ENST00000570188 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
RBFOX1-220ENST00000570188 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
RBFOX1-220ENST00000570188 FOXO3O43524 673 aa12.82□□□□□ -0.36
RBFOX1-220ENST00000570188 PDIA6Q15084 440 aa12.82□□□□□ -0.36
RBFOX1-220ENST00000570188 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
RBFOX1-220ENST00000570188 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 PXDNQ92626 1479 aa12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 APAF1O14727 1248 aa12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 FLT4P35916 1363 aa12.81□□□□□ -0.36
RBFOX1-220ENST00000570188 FOXK1P85037 733 aa12.8□□□□□ -0.36
RBFOX1-220ENST00000570188 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
RBFOX1-220ENST00000570188 LTBP4Q8N2S1 1624 aa12.8□□□□□ -0.36
RBFOX1-220ENST00000570188 RGPD5Q99666 1765 aa12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 KIF24Q5T7B8 1368 aa12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
RBFOX1-220ENST00000570188 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 IL13P35225 146 aa12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 AMPHP49418 695 aa12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 EVX2Q03828 476 aa12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 MAPK8IP3Q9UPT6 1336 aa12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
RBFOX1-220ENST00000570188 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.36
RBFOX1-220ENST00000570188 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
RBFOX1-220ENST00000570188 ZNF521Q96K83 1311 aa12.77□□□□□ -0.37
RBFOX1-220ENST00000570188 ATMINO43313 823 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-220ENST00000570188 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-220ENST00000570188 BRINP3Q76B58 766 aa12.76□□□□□ -0.37
RBFOX1-220ENST00000570188 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
RBFOX1-220ENST00000570188 TMEM121BQ9BXQ6 578 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-220ENST00000570188 USP19O94966 1318 aa12.76□□□□□ -0.37
RBFOX1-220ENST00000570188 ROBO1Q9Y6N7 1651 aa12.76□□□□□ -0.37
RBFOX1-220ENST00000570188 HAX1O00165 279 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 FCHSD2O94868 740 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 PLPP6Q8IY26 295 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 DDX17Q92841 729 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 RRP7AQ9Y3A4 280 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 BOLA1Q9Y3E2 137 aa12.75□□□□□ -0.37
RBFOX1-220ENST00000570188 ARHGEF10O15013 1369 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 NEFLP07196 543 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 NEFMP07197 916 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 HMOX1P09601 288 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 PRKAR2BP31323 418 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
RBFOX1-220ENST00000570188 KIF3CO14782 793 aa12.73□□□□□ -0.37
RBFOX1-220ENST00000570188 HOXC9P31274 260 aa12.73□□□□□ -0.37
RBFOX1-220ENST00000570188 CLCN6P51797 869 aa12.73□□□□□ -0.37
RBFOX1-220ENST00000570188 ASTLQ6HA08 431 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-220ENST00000570188 AK7Q96M32 723 aa12.73□□□□□ -0.37
RBFOX1-220ENST00000570188 SUPT16HQ9Y5B9 1047 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-220ENST00000570188 FAM208AQ9UK61 1670 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms