RNA–Protein interactions for RNA: ENST00000569961.5

CCDC187-203, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC187, Length 3,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-203ENST00000569961 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
CCDC187-203ENST00000569961 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
CCDC187-203ENST00000569961 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
CCDC187-203ENST00000569961 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.74■□□□□ 0.43
CCDC187-203ENST00000569961 FLT4P35916 1363 aa17.73■□□□□ 0.43
CCDC187-203ENST00000569961 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
CCDC187-203ENST00000569961 ZBTB40Q9NUA8 1239 aa17.73■□□□□ 0.43
CCDC187-203ENST00000569961 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
CCDC187-203ENST00000569961 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
CCDC187-203ENST00000569961 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
CCDC187-203ENST00000569961 SETD1AO15047 1707 aaKnown RBP17.71■□□□□ 0.43
CCDC187-203ENST00000569961 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
CCDC187-203ENST00000569961 TECPR2O15040 1411 aa17.71■□□□□ 0.43
CCDC187-203ENST00000569961 TEFQ10587 303 aa17.71■□□□□ 0.43
CCDC187-203ENST00000569961 MS4A1P11836 297 aa17.71■□□□□ 0.43
CCDC187-203ENST00000569961 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.42
CCDC187-203ENST00000569961 RTN4Q9NQC3 1192 aaKnown RBP17.71■□□□□ 0.42
CCDC187-203ENST00000569961 EXOC6BQ9Y2D4 811 aa17.71■□□□□ 0.42
CCDC187-203ENST00000569961 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
CCDC187-203ENST00000569961 STK31Q9BXU1 1019 aa17.7■□□□□ 0.42
CCDC187-203ENST00000569961 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
CCDC187-203ENST00000569961 CHL1O00533 1208 aa17.69■□□□□ 0.42
CCDC187-203ENST00000569961 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
CCDC187-203ENST00000569961 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
CCDC187-203ENST00000569961 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
CCDC187-203ENST00000569961 DIP2AQ14689 1571 aa17.69■□□□□ 0.42
CCDC187-203ENST00000569961 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
CCDC187-203ENST00000569961 ZNF335Q9H4Z2 1342 aaPredicted RBP17.69■□□□□ 0.42
CCDC187-203ENST00000569961 AATKQ6ZMQ8 1374 aa17.68■□□□□ 0.42
CCDC187-203ENST00000569961 HDGFL1Q5TGJ6 251 aa17.68■□□□□ 0.42
CCDC187-203ENST00000569961 CEP170BQ9Y4F5 1589 aaPredicted RBP17.68■□□□□ 0.42
CCDC187-203ENST00000569961 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
CCDC187-203ENST00000569961 MYL6BP14649 208 aa17.67■□□□□ 0.42
CCDC187-203ENST00000569961 NPHP4O75161 1426 aaPredicted RBP17.67■□□□□ 0.42
CCDC187-203ENST00000569961 KIF20BQ96Q89 1820 aa17.67■□□□□ 0.42
CCDC187-203ENST00000569961 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
CCDC187-203ENST00000569961 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
CCDC187-203ENST00000569961 MED14O60244 1454 aa17.67■□□□□ 0.42
CCDC187-203ENST00000569961 IL16Q14005 1332 aa17.66■□□□□ 0.42
CCDC187-203ENST00000569961 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
CCDC187-203ENST00000569961 DDX54Q8TDD1 881 aaKnown RBP17.66■□□□□ 0.42
CCDC187-203ENST00000569961 C19orf44Q9H6X5 657 aa17.66■□□□□ 0.42
CCDC187-203ENST00000569961 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
CCDC187-203ENST00000569961 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
CCDC187-203ENST00000569961 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
CCDC187-203ENST00000569961 IP6K1Q92551 441 aa17.64■□□□□ 0.41
CCDC187-203ENST00000569961 IL1RAPL2Q9NP60 686 aa17.64■□□□□ 0.41
CCDC187-203ENST00000569961 CHPF2Q9P2E5 772 aa17.64■□□□□ 0.41
CCDC187-203ENST00000569961 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
CCDC187-203ENST00000569961 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
CCDC187-203ENST00000569961 IGSF1Q8N6C5 1336 aa17.63■□□□□ 0.41
CCDC187-203ENST00000569961 FLIIQ13045 1269 aa17.63■□□□□ 0.41
CCDC187-203ENST00000569961 PROSER3Q2NL68 480 aa17.63■□□□□ 0.41
CCDC187-203ENST00000569961 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
CCDC187-203ENST00000569961 MSH6P52701 1360 aa17.62■□□□□ 0.41
CCDC187-203ENST00000569961 ARHGAP23Q9P227 1491 aa17.62■□□□□ 0.41
CCDC187-203ENST00000569961 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
CCDC187-203ENST00000569961 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
CCDC187-203ENST00000569961 DTNBO60941 627 aa17.61■□□□□ 0.41
CCDC187-203ENST00000569961 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
CCDC187-203ENST00000569961 USP32Q8NFA0 1604 aa17.61■□□□□ 0.41
CCDC187-203ENST00000569961 USP19O94966 1318 aa17.61■□□□□ 0.41
CCDC187-203ENST00000569961 NFATC2IPQ8NCF5 419 aa17.61■□□□□ 0.41
CCDC187-203ENST00000569961 RAPGEF4Q8WZA2 1011 aa17.61■□□□□ 0.41
CCDC187-203ENST00000569961 PTCD1O75127 700 aaKnown RBP17.6■□□□□ 0.41
CCDC187-203ENST00000569961 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
CCDC187-203ENST00000569961 PRDM11Q9NQV5 511 aa17.6■□□□□ 0.41
CCDC187-203ENST00000569961 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
CCDC187-203ENST00000569961 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
CCDC187-203ENST00000569961 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
CCDC187-203ENST00000569961 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
CCDC187-203ENST00000569961 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
CCDC187-203ENST00000569961 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
CCDC187-203ENST00000569961 SLIT1O75093 1534 aa17.58■□□□□ 0.41
CCDC187-203ENST00000569961 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
CCDC187-203ENST00000569961 ITSN1Q15811 1721 aa17.58■□□□□ 0.4
CCDC187-203ENST00000569961 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
CCDC187-203ENST00000569961 CWF19L2Q2TBE0 894 aaKnown RBP17.58■□□□□ 0.4
CCDC187-203ENST00000569961 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
CCDC187-203ENST00000569961 TOM1L2Q6ZVM7 507 aa17.58■□□□□ 0.4
CCDC187-203ENST00000569961 USP31Q70CQ4 1352 aa17.58■□□□□ 0.4
CCDC187-203ENST00000569961 SSH2Q76I76 1423 aa17.57■□□□□ 0.4
CCDC187-203ENST00000569961 ADGRB2O60241 1585 aa17.57■□□□□ 0.4
CCDC187-203ENST00000569961 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
CCDC187-203ENST00000569961 PTCH1Q13635 1447 aa17.56■□□□□ 0.4
CCDC187-203ENST00000569961 KDM4FA0A1W2PPD8 638 aa17.56■□□□□ 0.4
CCDC187-203ENST00000569961 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
CCDC187-203ENST00000569961 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
CCDC187-203ENST00000569961 NBPF7P0C2Y1 421 aaPredicted RBP17.55■□□□□ 0.4
CCDC187-203ENST00000569961 PIP4K2BP78356 416 aa17.55■□□□□ 0.4
CCDC187-203ENST00000569961 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
CCDC187-203ENST00000569961 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
CCDC187-203ENST00000569961 NUTM1Q86Y26 1132 aa17.54■□□□□ 0.4
CCDC187-203ENST00000569961 RILPL2Q969X0 211 aa17.54■□□□□ 0.4
CCDC187-203ENST00000569961 MAP3K5Q99683 1374 aa17.54■□□□□ 0.4
CCDC187-203ENST00000569961 SMC5Q8IY18 1101 aa17.54■□□□□ 0.4
CCDC187-203ENST00000569961 SIL1Q9H173 461 aa17.54■□□□□ 0.4
CCDC187-203ENST00000569961 NUCB1Q02818 461 aa17.54■□□□□ 0.4
CCDC187-203ENST00000569961 C22orf23Q9BZE7 217 aa17.54■□□□□ 0.4
CCDC187-203ENST00000569961 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms