RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 DISP3Q9P2K9 1392 aa9.57□□□□□ -0.88
LINC00556-201ENST00000569603 SCAF11Q99590 1463 aaKnown RBP9.57□□□□□ -0.88
LINC00556-201ENST00000569603 EFCAB6Q5THR3 1501 aa9.56□□□□□ -0.88
LINC00556-201ENST00000569603 LTKP29376 864 aa9.56□□□□□ -0.88
LINC00556-201ENST00000569603 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
LINC00556-201ENST00000569603 PHOX2BQ99453 314 aa9.56□□□□□ -0.88
LINC00556-201ENST00000569603 SPSB2Q99619 263 aa9.56□□□□□ -0.88
LINC00556-201ENST00000569603 RRP7BPQ9NSQ0 103 aa9.56□□□□□ -0.88
LINC00556-201ENST00000569603 FUT2Q10981 343 aa9.55□□□□□ -0.88
LINC00556-201ENST00000569603 PKDCCQ504Y2 493 aa9.55□□□□□ -0.88
LINC00556-201ENST00000569603 TET3O43151 1660 aa9.55□□□□□ -0.88
LINC00556-201ENST00000569603 ANKRD30AQ9BXX3 1397 aa9.54□□□□□ -0.88
LINC00556-201ENST00000569603 TMEM2Q9UHN6 1383 aa9.54□□□□□ -0.88
LINC00556-201ENST00000569603 DDX11L8A8MPP1 907 aa9.54□□□□□ -0.88
LINC00556-201ENST00000569603 TPRNQ4KMQ1 711 aa9.54□□□□□ -0.88
LINC00556-201ENST00000569603 MORN1Q5T089 497 aa9.54□□□□□ -0.88
LINC00556-201ENST00000569603 SMYD5Q6GMV2 418 aa9.54□□□□□ -0.88
LINC00556-201ENST00000569603 FAM187AA6NFU0 413 aa9.53□□□□□ -0.88
LINC00556-201ENST00000569603 DGAT1O75907 488 aa9.53□□□□□ -0.88
LINC00556-201ENST00000569603 THAP11Q96EK4 314 aa9.53□□□□□ -0.88
LINC00556-201ENST00000569603 SOCS7O14512 581 aa9.52□□□□□ -0.89
LINC00556-201ENST00000569603 UNC13BO14795 1591 aa9.52□□□□□ -0.89
LINC00556-201ENST00000569603 HSPA1LP34931 641 aa9.52□□□□□ -0.89
LINC00556-201ENST00000569603 RPRD2Q5VT52 1461 aaKnown RBP9.52□□□□□ -0.89
LINC00556-201ENST00000569603 ADGRB3O60242 1522 aa9.51□□□□□ -0.89
LINC00556-201ENST00000569603 MED1Q15648 1581 aaPredicted RBP9.51□□□□□ -0.89
LINC00556-201ENST00000569603 IDI1Q13907 227 aa9.51□□□□□ -0.89
LINC00556-201ENST00000569603 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
LINC00556-201ENST00000569603 PKD2L1Q9P0L9 805 aa9.51□□□□□ -0.89
LINC00556-201ENST00000569603 ZFYVE9O95405 1425 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 ANKRD50Q9ULJ7 1429 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 MYO5BQ9ULV0 1848 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 POTECB2RU33 542 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 TOM1O60784 492 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 PRDM9Q9NQV7 894 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 FCF1Q9Y324 198 aaKnown RBP9.5□□□□□ -0.89
LINC00556-201ENST00000569603 NWD1Q149M9 1564 aa9.5□□□□□ -0.89
LINC00556-201ENST00000569603 GCC2Q8IWJ2 1684 aa9.49□□□□□ -0.89
LINC00556-201ENST00000569603 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
LINC00556-201ENST00000569603 GCGRP47871 477 aa9.49□□□□□ -0.89
LINC00556-201ENST00000569603 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
LINC00556-201ENST00000569603 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
LINC00556-201ENST00000569603 TMEM131LA2VDJ0 1609 aa9.49□□□□□ -0.89
LINC00556-201ENST00000569603 ROCK1Q13464 1354 aa9.49□□□□□ -0.89
LINC00556-201ENST00000569603 KANK1Q14678 1352 aa9.49□□□□□ -0.89
LINC00556-201ENST00000569603 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
LINC00556-201ENST00000569603 FOXC1Q12948 553 aa9.48□□□□□ -0.89
LINC00556-201ENST00000569603 GPIHBP1Q8IV16 184 aa9.48□□□□□ -0.89
LINC00556-201ENST00000569603 E9PCH4 1651 aa9.48□□□□□ -0.89
LINC00556-201ENST00000569603 IQGAP3Q86VI3 1631 aa9.47□□□□□ -0.89
LINC00556-201ENST00000569603 FMNL1O95466 1100 aaPredicted RBP9.46□□□□□ -0.9
LINC00556-201ENST00000569603 PIP4K2BP78356 416 aa9.46□□□□□ -0.9
LINC00556-201ENST00000569603 RNF19BQ6ZMZ0 732 aa9.46□□□□□ -0.9
LINC00556-201ENST00000569603 SULF1Q8IWU6 871 aa9.46□□□□□ -0.9
LINC00556-201ENST00000569603 SLC52A1Q9NWF4 448 aa9.46□□□□□ -0.9
LINC00556-201ENST00000569603 NKTRP30414 1462 aaKnown RBP9.46□□□□□ -0.9
LINC00556-201ENST00000569603 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
LINC00556-201ENST00000569603 KCNA6P17658 529 aa9.44□□□□□ -0.9
LINC00556-201ENST00000569603 RPIAP49247 311 aa9.44□□□□□ -0.9
LINC00556-201ENST00000569603 BRICD5Q6PL45 260 aa9.44□□□□□ -0.9
LINC00556-201ENST00000569603 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
LINC00556-201ENST00000569603 EID1Q9Y6B2 187 aa9.44□□□□□ -0.9
LINC00556-201ENST00000569603 TMEM94Q12767 1356 aa9.44□□□□□ -0.9
LINC00556-201ENST00000569603 FAM135BQ49AJ0 1406 aa9.44□□□□□ -0.9
LINC00556-201ENST00000569603 PLEKHG1Q9ULL1 1385 aa9.43□□□□□ -0.9
LINC00556-201ENST00000569603 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
LINC00556-201ENST00000569603 FAM50AQ14320 339 aaKnown RBP9.43□□□□□ -0.9
LINC00556-201ENST00000569603 AAASQ9NRG9 546 aa9.43□□□□□ -0.9
LINC00556-201ENST00000569603 ADAMTS13Q76LX8 1427 aa9.42□□□□□ -0.9
LINC00556-201ENST00000569603 LMOD2Q6P5Q4 547 aa9.42□□□□□ -0.9
LINC00556-201ENST00000569603 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
LINC00556-201ENST00000569603 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
LINC00556-201ENST00000569603 RIMS2Q9UQ26 1411 aa9.41□□□□□ -0.9
LINC00556-201ENST00000569603 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
LINC00556-201ENST00000569603 TOR4AQ9NXH8 423 aa9.41□□□□□ -0.9
LINC00556-201ENST00000569603 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
LINC00556-201ENST00000569603 ROBO1Q9Y6N7 1651 aa9.41□□□□□ -0.9
LINC00556-201ENST00000569603 NRXN3Q9Y4C0 1643 aa9.41□□□□□ -0.9
LINC00556-201ENST00000569603 CD46P15529 392 aa9.4□□□□□ -0.9
LINC00556-201ENST00000569603 MSS51Q4VC12 460 aa9.4□□□□□ -0.9
LINC00556-201ENST00000569603 RGS17Q9UGC6 210 aaPredicted RBP9.4□□□□□ -0.9
LINC00556-201ENST00000569603 RRBP1Q9P2E9 1410 aaKnown RBP9.39□□□□□ -0.91
LINC00556-201ENST00000569603 DIP2AQ14689 1571 aa9.39□□□□□ -0.91
LINC00556-201ENST00000569603 DACH1Q9UI36 760 aa9.39□□□□□ -0.91
LINC00556-201ENST00000569603 SRCAPQ6ZRS2 3230 aa9.39□□□□□ -0.91
LINC00556-201ENST00000569603 MAP2K5Q13163 448 aa9.38□□□□□ -0.91
LINC00556-201ENST00000569603 HLA-CQ95604 372 aa9.38□□□□□ -0.91
LINC00556-201ENST00000569603 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
LINC00556-201ENST00000569603 SPHKAPQ2M3C7 1700 aa9.38□□□□□ -0.91
LINC00556-201ENST00000569603 NCOA3Q9Y6Q9 1424 aa9.38□□□□□ -0.91
LINC00556-201ENST00000569603 SETBP1Q9Y6X0 1596 aa9.37□□□□□ -0.91
LINC00556-201ENST00000569603 XRN1Q8IZH2 1706 aaKnown RBP9.37□□□□□ -0.91
LINC00556-201ENST00000569603 CD2BP2O95400 341 aaKnown RBP9.37□□□□□ -0.91
LINC00556-201ENST00000569603 PTPRUQ92729 1446 aa9.37□□□□□ -0.91
LINC00556-201ENST00000569603 NUP155O75694 1391 aa9.37□□□□□ -0.91
LINC00556-201ENST00000569603 PIK3R4Q99570 1358 aa9.37□□□□□ -0.91
LINC00556-201ENST00000569603 COL16A1Q07092 1604 aaPredicted RBP9.36□□□□□ -0.91
LINC00556-201ENST00000569603 AVPP01185 164 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms